RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 NEURL1BA8MQ27 555 aa21.39■■□□□ 1.01
SCAMP4-204ENST00000414057 RIMBP2O15034 1052 aa21.39■■□□□ 1.01
SCAMP4-204ENST00000414057 VAMP4O75379 141 aa21.39■■□□□ 1.01
SCAMP4-204ENST00000414057 CTSWP56202 376 aa21.39■■□□□ 1.01
SCAMP4-204ENST00000414057 ALDH1L2Q3SY69 923 aa21.39■■□□□ 1.01
SCAMP4-204ENST00000414057 IFFO2Q5TF58 517 aa21.39■■□□□ 1.01
SCAMP4-204ENST00000414057 G2E3Q7L622 706 aa21.39■■□□□ 1.01
SCAMP4-204ENST00000414057 JARID2Q92833 1246 aaPredicted RBP21.39■■□□□ 1.01
SCAMP4-204ENST00000414057 G3V3G9 751 aa21.38■■□□□ 1.01
SCAMP4-204ENST00000414057 CWF19L2Q2TBE0 894 aaKnown RBP21.38■■□□□ 1.01
SCAMP4-204ENST00000414057 DCAF8Q5TAQ9 597 aa21.38■■□□□ 1.01
SCAMP4-204ENST00000414057 CCDC85AQ96PX6 553 aaPredicted RBP21.38■■□□□ 1.01
SCAMP4-204ENST00000414057 GGA1Q9UJY5 639 aa21.38■■□□□ 1.01
SCAMP4-204ENST00000414057 DUOX1Q9NRD9 1551 aa21.37■■□□□ 1.01
SCAMP4-204ENST00000414057 CNTNAP1P78357 1384 aa21.37■■□□□ 1.01
SCAMP4-204ENST00000414057 YDJCA8MPS7 323 aa21.37■■□□□ 1.01
SCAMP4-204ENST00000414057 H7C1D1 291 aa21.37■■□□□ 1.01
SCAMP4-204ENST00000414057 DNAAF4Q8WXU2 420 aa21.37■■□□□ 1.01
SCAMP4-204ENST00000414057 DBNDD1Q9H9R9 158 aa21.37■■□□□ 1.01
SCAMP4-204ENST00000414057 UFL1O94874 794 aa21.36■■□□□ 1.01
SCAMP4-204ENST00000414057 TTLL11Q8NHH1 800 aa21.36■■□□□ 1.01
SCAMP4-204ENST00000414057 ZC3H15Q8WU90 426 aaKnown RBP21.36■■□□□ 1.01
SCAMP4-204ENST00000414057 DPF2Q92785 391 aa21.36■■□□□ 1.01
SCAMP4-204ENST00000414057 LTBP1Q14766 1721 aa21.36■■□□□ 1.01
SCAMP4-204ENST00000414057 TAF1P21675 1872 aa21.35■■□□□ 1.01
SCAMP4-204ENST00000414057 H7C1W4 665 aa21.35■■□□□ 1.01
SCAMP4-204ENST00000414057 ECE2O60344 883 aa21.35■■□□□ 1.01
SCAMP4-204ENST00000414057 RPS12P25398 132 aaKnown RBP21.35■■□□□ 1.01
SCAMP4-204ENST00000414057 UBE3BQ7Z3V4 1068 aa21.35■■□□□ 1.01
SCAMP4-204ENST00000414057 LINS1Q8NG48 757 aa21.35■■□□□ 1.01
SCAMP4-204ENST00000414057 CNOT7Q9UIV1 285 aaKnown RBP21.35■■□□□ 1.01
SCAMP4-204ENST00000414057 XDHP47989 1333 aa21.34■■□□□ 1.01
SCAMP4-204ENST00000414057 BCAR3O75815 825 aa21.34■■□□□ 1.01
SCAMP4-204ENST00000414057 HSPA1AP0DMV8 641 aaKnown RBP21.34■■□□□ 1.01
SCAMP4-204ENST00000414057 HSPA1BP0DMV9 641 aaKnown RBP21.34■■□□□ 1.01
SCAMP4-204ENST00000414057 BRPF1P55201 1214 aaPredicted RBP21.34■■□□□ 1.01
SCAMP4-204ENST00000414057 IRX6P78412 446 aaPredicted RBP21.34■■□□□ 1.01
SCAMP4-204ENST00000414057 GCKRQ14397 625 aa21.34■■□□□ 1.01
SCAMP4-204ENST00000414057 RTL9Q8NET4 1388 aa21.34■■□□□ 1.01
SCAMP4-204ENST00000414057 PSMD14O00487 310 aa21.33■■□□□ 1.01
SCAMP4-204ENST00000414057 ATP2B4P23634 1241 aa21.33■■□□□ 1.01
SCAMP4-204ENST00000414057 DOK7Q18PE1 504 aa21.33■■□□□ 1.01
SCAMP4-204ENST00000414057 DEFB115Q30KQ5 88 aa21.33■■□□□ 1.01
SCAMP4-204ENST00000414057 ABT1Q9ULW3 272 aaKnown RBP21.33■■□□□ 1.01
SCAMP4-204ENST00000414057 RASSF10A6NK89 507 aa21.32■■□□□ 1
SCAMP4-204ENST00000414057 PLA2G12BQ9BX93 195 aa21.32■■□□□ 1
SCAMP4-204ENST00000414057 BSDC1Q9NW68 430 aaPredicted RBP21.32■■□□□ 1
SCAMP4-204ENST00000414057 KIF16BQ96L93 1317 aa21.32■■□□□ 1
SCAMP4-204ENST00000414057 MS4A1P11836 297 aa21.32■■□□□ 1
SCAMP4-204ENST00000414057 IGHMBP2P38935 993 aaKnown RBP21.32■■□□□ 1
SCAMP4-204ENST00000414057 PDE3AQ14432 1141 aa21.32■■□□□ 1
SCAMP4-204ENST00000414057 MICALL2Q8IY33 904 aa21.32■■□□□ 1
SCAMP4-204ENST00000414057 GREM2Q9H772 168 aa21.32■■□□□ 1
SCAMP4-204ENST00000414057 SMC4Q9NTJ3 1288 aa21.32■■□□□ 1
SCAMP4-204ENST00000414057 PGAP2Q9UHJ9 254 aa21.32■■□□□ 1
SCAMP4-204ENST00000414057 ZBTB12Q9Y330 459 aaPredicted RBP21.31■■□□□ 1
SCAMP4-204ENST00000414057 PLIN1O60240 522 aa21.3■■□□□ 1
SCAMP4-204ENST00000414057 CDC37L1Q7L3B6 337 aa21.3■■□□□ 1
SCAMP4-204ENST00000414057 SSH1Q8WYL5 1049 aa21.3■■□□□ 1
SCAMP4-204ENST00000414057 PPP4R2Q9NY27 417 aa21.3■■□□□ 1
SCAMP4-204ENST00000414057 COL4A1P02462 1669 aa21.3■■□□□ 1
SCAMP4-204ENST00000414057 VEGFBP49765 207 aa21.29■■□□□ 1
SCAMP4-204ENST00000414057 GPR101Q96P66 508 aaPredicted RBP21.29■■□□□ 1
SCAMP4-204ENST00000414057 MINPP1Q9UNW1 487 aa21.29■■□□□ 1
SCAMP4-204ENST00000414057 IPO8O15397 1037 aaKnown RBP21.28■■□□□ 1
SCAMP4-204ENST00000414057 VIL1P09327 827 aaKnown RBP21.28■■□□□ 1
SCAMP4-204ENST00000414057 PODNQ7Z5L7 613 aa21.28■■□□□ 1
SCAMP4-204ENST00000414057 ITGA6P23229 1130 aa21.27■■□□□ 1
SCAMP4-204ENST00000414057 ECE1P42892 770 aa21.27■■□□□ 1
SCAMP4-204ENST00000414057 HIRAP54198 1017 aaPredicted RBP21.27■■□□□ 1
SCAMP4-204ENST00000414057 TRPM4Q8TD43 1214 aa21.27■■□□□ 1
SCAMP4-204ENST00000414057 MPHOSPH8Q99549 860 aa21.27■■□□□ 1
SCAMP4-204ENST00000414057 CACNA1FO60840 1977 aa21.27■■□□□ 1
SCAMP4-204ENST00000414057 TRAF5O00463 557 aa21.26■□□□□ 0.99
SCAMP4-204ENST00000414057 CSF1RP07333 972 aa21.26■□□□□ 0.99
SCAMP4-204ENST00000414057 CASP7P55210 303 aa21.26■□□□□ 0.99
SCAMP4-204ENST00000414057 ZKSCAN2Q63HK3 967 aa21.26■□□□□ 0.99
SCAMP4-204ENST00000414057 AIDAQ96BJ3 306 aa21.26■□□□□ 0.99
SCAMP4-204ENST00000414057 GLIS2Q9BZE0 524 aaPredicted RBP21.26■□□□□ 0.99
SCAMP4-204ENST00000414057 ANKRD2Q9GZV1 360 aa21.26■□□□□ 0.99
SCAMP4-204ENST00000414057 KCNQ5Q9NR82 932 aa21.26■□□□□ 0.99
SCAMP4-204ENST00000414057 LEMD3Q9Y2U8 911 aa21.26■□□□□ 0.99
SCAMP4-204ENST00000414057 BEND3Q5T5X7 828 aa21.26■□□□□ 0.99
SCAMP4-204ENST00000414057 AGBL3Q8NEM8 1001 aa21.26■□□□□ 0.99
SCAMP4-204ENST00000414057 FRAT1Q92837 279 aaPredicted RBP21.26■□□□□ 0.99
SCAMP4-204ENST00000414057 WDR33Q9C0J8 1336 aaKnown RBP21.25■□□□□ 0.99
SCAMP4-204ENST00000414057 MED23Q9ULK4 1368 aa21.25■□□□□ 0.99
SCAMP4-204ENST00000414057 F6X3S4 739 aa21.25■□□□□ 0.99
SCAMP4-204ENST00000414057 CELF2O95319 508 aaKnown RBP21.25■□□□□ 0.99
SCAMP4-204ENST00000414057 CCT4P50991 539 aaKnown RBP21.25■□□□□ 0.99
SCAMP4-204ENST00000414057 COL13A1Q5TAT6 717 aaPredicted RBP21.25■□□□□ 0.99
SCAMP4-204ENST00000414057 CST9Q5W186 159 aa21.25■□□□□ 0.99
SCAMP4-204ENST00000414057 PAXIP1Q6ZW49 1069 aaPredicted RBP21.25■□□□□ 0.99
SCAMP4-204ENST00000414057 SAMD7Q7Z3H4 446 aa21.25■□□□□ 0.99
SCAMP4-204ENST00000414057 ARHGAP45Q92619 1136 aa21.25■□□□□ 0.99
SCAMP4-204ENST00000414057 TLL2Q9Y6L7 1015 aa21.25■□□□□ 0.99
SCAMP4-204ENST00000414057 SHTN1A0MZ66 631 aa21.24■□□□□ 0.99
SCAMP4-204ENST00000414057 ANKRD18BA2A2Z9 1011 aa21.24■□□□□ 0.99
SCAMP4-204ENST00000414057 FMR1Q06787 632 aaKnown RBP eCLIP21.24■□□□□ 0.99
SCAMP4-204ENST00000414057 FAM161AQ3B820 660 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms