RNA–Protein interactions for RNA: ENST00000414008.3

HCG27-202, Transcript of HLA complex group 27, humanhuman

TSL 4

Gene HCG27, Length 829 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-202ENST00000414008 SLC15A2Q16348 729 aa12.65□□□□□ -0.38
HCG27-202ENST00000414008 MCM10Q7L590 875 aa12.65□□□□□ -0.38
HCG27-202ENST00000414008 PNISRQ8TF01 805 aaKnown RBP12.65□□□□□ -0.38
HCG27-202ENST00000414008 TMPOP42166 694 aaKnown RBP12.64□□□□□ -0.39
HCG27-202ENST00000414008 RIPK4P57078 832 aa12.64□□□□□ -0.39
HCG27-202ENST00000414008 DCTN1Q14203 1278 aa12.64□□□□□ -0.39
HCG27-202ENST00000414008 PDZRN3Q9UPQ7 1066 aa12.64□□□□□ -0.39
HCG27-202ENST00000414008 CEMIPQ8WUJ3 1361 aa12.64□□□□□ -0.39
HCG27-202ENST00000414008 NUP188Q5SRE5 1749 aa12.63□□□□□ -0.39
HCG27-202ENST00000414008 GFRA3O60609 400 aa12.63□□□□□ -0.39
HCG27-202ENST00000414008 PTCD1O75127 700 aaKnown RBP12.63□□□□□ -0.39
HCG27-202ENST00000414008 SLC39A6Q13433 755 aa12.63□□□□□ -0.39
HCG27-202ENST00000414008 PTCRAQ6ISU1 281 aaPredicted RBP12.63□□□□□ -0.39
HCG27-202ENST00000414008 MRC1P22897 1456 aa12.63□□□□□ -0.39
HCG27-202ENST00000414008 SCN11AQ9UI33 1791 aa12.63□□□□□ -0.39
HCG27-202ENST00000414008 BTBD11A6QL63 1104 aa12.62□□□□□ -0.39
HCG27-202ENST00000414008 ZNF827Q17R98 1081 aa12.62□□□□□ -0.39
HCG27-202ENST00000414008 DIEXFQ68CQ4 756 aaKnown RBP12.62□□□□□ -0.39
HCG27-202ENST00000414008 TTC5Q8N0Z6 440 aa12.62□□□□□ -0.39
HCG27-202ENST00000414008 SLC4A9Q96Q91 983 aa12.62□□□□□ -0.39
HCG27-202ENST00000414008 UNC93B1Q9H1C4 597 aa12.62□□□□□ -0.39
HCG27-202ENST00000414008 RRP7AQ9Y3A4 280 aaKnown RBP12.62□□□□□ -0.39
HCG27-202ENST00000414008 LY75O60449 1722 aa12.62□□□□□ -0.39
HCG27-202ENST00000414008 ADAMTS7Q9UKP4 1686 aa12.61□□□□□ -0.39
HCG27-202ENST00000414008 LMOD3Q0VAK6 560 aa12.61□□□□□ -0.39
HCG27-202ENST00000414008 ITPK1Q13572 414 aa12.61□□□□□ -0.39
HCG27-202ENST00000414008 TAF7Q15545 349 aaPredicted RBP12.61□□□□□ -0.39
HCG27-202ENST00000414008 ZNF790Q6PG37 636 aa12.61□□□□□ -0.39
HCG27-202ENST00000414008 TFCP2L1Q9NZI6 479 aa12.61□□□□□ -0.39
HCG27-202ENST00000414008 APAF1O14727 1248 aa12.6□□□□□ -0.39
HCG27-202ENST00000414008 AP1G2O75843 785 aa12.6□□□□□ -0.39
HCG27-202ENST00000414008 RFC5P40937 340 aa12.6□□□□□ -0.39
HCG27-202ENST00000414008 WNT7BP56706 349 aa12.6□□□□□ -0.39
HCG27-202ENST00000414008 CTDSPL2Q05D32 466 aa12.6□□□□□ -0.39
HCG27-202ENST00000414008 FOXC1Q12948 553 aa12.6□□□□□ -0.39
HCG27-202ENST00000414008 LINC00116Q8NCU8 138 aa12.6□□□□□ -0.39
HCG27-202ENST00000414008 THUMPD2Q9BTF0 503 aaKnown RBP12.6□□□□□ -0.39
HCG27-202ENST00000414008 F12P00748 615 aaPredicted RBP12.59□□□□□ -0.39
HCG27-202ENST00000414008 PRR20EP86478 221 aa12.59□□□□□ -0.39
HCG27-202ENST00000414008 PRR20CP86479 221 aa12.59□□□□□ -0.39
HCG27-202ENST00000414008 PRR20DP86480 221 aa12.59□□□□□ -0.39
HCG27-202ENST00000414008 PRR20BP86481 221 aa12.59□□□□□ -0.39
HCG27-202ENST00000414008 PRR20AP86496 221 aa12.59□□□□□ -0.39
HCG27-202ENST00000414008 NRG2O14511 850 aaPredicted RBP12.58□□□□□ -0.4
HCG27-202ENST00000414008 FAM9BQ8IZU0 186 aa12.58□□□□□ -0.4
HCG27-202ENST00000414008 MAP10Q9P2G4 905 aa12.58□□□□□ -0.4
HCG27-202ENST00000414008 PAPPAQ13219 1627 aa12.58□□□□□ -0.4
HCG27-202ENST00000414008 CCER2I3L3R5 266 aa12.57□□□□□ -0.4
HCG27-202ENST00000414008 TNFRSF10AO00220 468 aa12.57□□□□□ -0.4
HCG27-202ENST00000414008 KCNQ3O43525 872 aa12.57□□□□□ -0.4
HCG27-202ENST00000414008 GDF9O60383 454 aa12.57□□□□□ -0.4
HCG27-202ENST00000414008 TMEM259Q4ZIN3 620 aa12.57□□□□□ -0.4
HCG27-202ENST00000414008 RC3H1Q5TC82 1133 aaKnown RBP12.57□□□□□ -0.4
HCG27-202ENST00000414008 TRIM67Q6ZTA4 783 aa12.57□□□□□ -0.4
HCG27-202ENST00000414008 DNAJC10Q8IXB1 793 aa12.57□□□□□ -0.4
HCG27-202ENST00000414008 ZNF496Q96IT1 587 aaPredicted RBP12.57□□□□□ -0.4
HCG27-202ENST00000414008 FMNL2Q96PY5 1086 aa12.57□□□□□ -0.4
HCG27-202ENST00000414008 PDGFDQ9GZP0 370 aaPredicted RBP12.57□□□□□ -0.4
HCG27-202ENST00000414008 MIS18AQ9NYP9 233 aa12.57□□□□□ -0.4
HCG27-202ENST00000414008 PNPLA7Q6ZV29 1317 aa12.57□□□□□ -0.4
HCG27-202ENST00000414008 FLAD1Q8NFF5 587 aa12.56□□□□□ -0.4
HCG27-202ENST00000414008 CNTNAP4Q9C0A0 1308 aa12.56□□□□□ -0.4
HCG27-202ENST00000414008 HEG1Q9ULI3 1381 aa12.56□□□□□ -0.4
HCG27-202ENST00000414008 WNT7AO00755 349 aa12.55□□□□□ -0.4
HCG27-202ENST00000414008 CRKLP46109 303 aaKnown RBP12.55□□□□□ -0.4
HCG27-202ENST00000414008 COL23A1Q86Y22 540 aaPredicted RBP12.55□□□□□ -0.4
HCG27-202ENST00000414008 ARMC2Q8NEN0 867 aa12.55□□□□□ -0.4
HCG27-202ENST00000414008 TEX13AQ9BXU3 409 aaPredicted RBP12.55□□□□□ -0.4
HCG27-202ENST00000414008 PKD2L1Q9P0L9 805 aa12.55□□□□□ -0.4
HCG27-202ENST00000414008 RTCBQ9Y3I0 505 aaKnown RBP12.55□□□□□ -0.4
HCG27-202ENST00000414008 KCPQ6ZWJ8 1503 aa12.55□□□□□ -0.4
HCG27-202ENST00000414008 VIRMAQ69YN4 1812 aaKnown RBP12.55□□□□□ -0.4
HCG27-202ENST00000414008 RPS6KA4O75676 772 aa12.54□□□□□ -0.4
HCG27-202ENST00000414008 ZBTB7AO95365 584 aa12.54□□□□□ -0.4
HCG27-202ENST00000414008 STARD3NLO95772 234 aa12.54□□□□□ -0.4
HCG27-202ENST00000414008 CYP19A1P11511 503 aaPredicted RBP12.54□□□□□ -0.4
HCG27-202ENST00000414008 SSFA2P28290 1259 aa12.54□□□□□ -0.4
HCG27-202ENST00000414008 AMIGO3Q86WK7 504 aa12.54□□□□□ -0.4
HCG27-202ENST00000414008 SLC16A10Q8TF71 515 aa12.54□□□□□ -0.4
HCG27-202ENST00000414008 BAP1Q92560 729 aa12.54□□□□□ -0.4
HCG27-202ENST00000414008 SPON1Q9HCB6 807 aa12.54□□□□□ -0.4
HCG27-202ENST00000414008 BABAM1Q9NWV8 329 aa12.54□□□□□ -0.4
HCG27-202ENST00000414008 TSPYL4Q9UJ04 414 aa12.54□□□□□ -0.4
HCG27-202ENST00000414008 DLG5Q8TDM6 1919 aa12.54□□□□□ -0.4
HCG27-202ENST00000414008 C5P01031 1676 aa12.54□□□□□ -0.4
HCG27-202ENST00000414008 SNRPA1P09661 255 aaKnown RBP12.53□□□□□ -0.4
HCG27-202ENST00000414008 SKOR1P84550 965 aa12.53□□□□□ -0.4
HCG27-202ENST00000414008 LINC01559Q495D7 138 aa12.53□□□□□ -0.4
HCG27-202ENST00000414008 TRAPPC3LQ5T215 181 aa12.53□□□□□ -0.4
HCG27-202ENST00000414008 INTS5Q6P9B9 1019 aaKnown RBP12.53□□□□□ -0.4
HCG27-202ENST00000414008 SMIM5Q71RC9 77 aa12.53□□□□□ -0.4
HCG27-202ENST00000414008 LRRN4Q8WUT4 740 aa12.53□□□□□ -0.4
HCG27-202ENST00000414008 MTFR1LQ9H019 292 aa12.53□□□□□ -0.4
HCG27-202ENST00000414008 LAS1LQ9Y4W2 734 aaKnown RBP12.53□□□□□ -0.4
HCG27-202ENST00000414008 ZNF831Q5JPB2 1677 aa12.53□□□□□ -0.4
HCG27-202ENST00000414008 C4BP0C0L5 1744 aa12.53□□□□□ -0.4
HCG27-202ENST00000414008 SIPA1L3O60292 1781 aaPredicted RBP12.53□□□□□ -0.4
HCG27-202ENST00000414008 SENP3-EIF4A1A0A087X0R7 540 aa12.52□□□□□ -0.41
HCG27-202ENST00000414008 CHL1O00533 1208 aa12.52□□□□□ -0.41
HCG27-202ENST00000414008 USP17L8P0C7I0 530 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms