RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 ENOX2Q16206 610 aaKnown RBP6.75□□□□□ -1.33
HMGB1P11-201ENST00000413899 COL13A1Q5TAT6 717 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P11-201ENST00000413899 GALNT6Q8NCL4 622 aa6.75□□□□□ -1.33
HMGB1P11-201ENST00000413899 PODXL2Q9NZ53 605 aa6.75□□□□□ -1.33
HMGB1P11-201ENST00000413899 FRRS1LQ9P0K9 344 aa6.75□□□□□ -1.33
HMGB1P11-201ENST00000413899 AMOTL2Q9Y2J4 779 aa6.75□□□□□ -1.33
HMGB1P11-201ENST00000413899 CCDC9Q9Y3X0 531 aaKnown RBP6.75□□□□□ -1.33
HMGB1P11-201ENST00000413899 LOC102724428A0A0B4J2F2 783 aa6.74□□□□□ -1.33
HMGB1P11-201ENST00000413899 SHISA8B8ZZ34 492 aa6.74□□□□□ -1.33
HMGB1P11-201ENST00000413899 EREGO14944 169 aa6.74□□□□□ -1.33
HMGB1P11-201ENST00000413899 ARHGEF15O94989 841 aa6.74□□□□□ -1.33
HMGB1P11-201ENST00000413899 P4HBP07237 508 aaKnown RBP6.74□□□□□ -1.33
HMGB1P11-201ENST00000413899 SIK1P57059 783 aa6.74□□□□□ -1.33
HMGB1P11-201ENST00000413899 KANK3Q6NY19 840 aa6.74□□□□□ -1.33
HMGB1P11-201ENST00000413899 GALNT12Q8IXK2 581 aa6.74□□□□□ -1.33
HMGB1P11-201ENST00000413899 CEP120Q8N960 986 aa6.74□□□□□ -1.33
HMGB1P11-201ENST00000413899 BTBD6Q96KE9 485 aa6.74□□□□□ -1.33
HMGB1P11-201ENST00000413899 NSUN5Q96P11 429 aaKnown RBP6.74□□□□□ -1.33
HMGB1P11-201ENST00000413899 IGFLR1Q9H665 355 aa6.74□□□□□ -1.33
HMGB1P11-201ENST00000413899 STARD13Q9Y3M8 1113 aa6.74□□□□□ -1.33
HMGB1P11-201ENST00000413899 EDN3P14138 238 aa6.73□□□□□ -1.33
HMGB1P11-201ENST00000413899 INSM1Q01101 510 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P11-201ENST00000413899 MAP3K10Q02779 954 aa6.73□□□□□ -1.33
HMGB1P11-201ENST00000413899 C20orf204Q6ZNR8 217 aa6.73□□□□□ -1.33
HMGB1P11-201ENST00000413899 FBXO33Q7Z6M2 555 aa6.73□□□□□ -1.33
HMGB1P11-201ENST00000413899 FAM35AQ86V20 835 aa6.73□□□□□ -1.33
HMGB1P11-201ENST00000413899 ZSCAN1Q8NBB4 408 aa6.73□□□□□ -1.33
HMGB1P11-201ENST00000413899 FBF1Q8TES7 1133 aa6.73□□□□□ -1.33
HMGB1P11-201ENST00000413899 TTC9Q92623 222 aa6.73□□□□□ -1.33
HMGB1P11-201ENST00000413899 PRDM6Q9NQX0 595 aa6.73□□□□□ -1.33
HMGB1P11-201ENST00000413899 KANSL3Q9P2N6 904 aa6.73□□□□□ -1.33
HMGB1P11-201ENST00000413899 NAGPAQ9UK23 515 aa6.73□□□□□ -1.33
HMGB1P11-201ENST00000413899 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P11-201ENST00000413899 MLLT1Q03111 559 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P11-201ENST00000413899 TBC1D8BQ0IIM8 1120 aa6.72□□□□□ -1.33
HMGB1P11-201ENST00000413899 USPL1Q5W0Q7 1092 aa6.72□□□□□ -1.33
HMGB1P11-201ENST00000413899 CHSY3Q70JA7 882 aa6.72□□□□□ -1.33
HMGB1P11-201ENST00000413899 NCAPG2Q86XI2 1143 aa6.72□□□□□ -1.33
HMGB1P11-201ENST00000413899 SVOPQ8N4V2 548 aa6.72□□□□□ -1.33
HMGB1P11-201ENST00000413899 RGS22Q8NE09 1264 aa6.72□□□□□ -1.33
HMGB1P11-201ENST00000413899 LPIN3Q9BQK8 851 aa6.72□□□□□ -1.33
HMGB1P11-201ENST00000413899 ENAMQ9NRM1 1142 aa6.72□□□□□ -1.33
HMGB1P11-201ENST00000413899 PNMA6FA0A0J9YX94 578 aa6.71□□□□□ -1.34
HMGB1P11-201ENST00000413899 J3QW42 95 aa6.71□□□□□ -1.34
HMGB1P11-201ENST00000413899 CPB1P15086 417 aa6.71□□□□□ -1.34
HMGB1P11-201ENST00000413899 FGD1P98174 961 aa6.71□□□□□ -1.34
HMGB1P11-201ENST00000413899 EAPPQ56P03 285 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P11-201ENST00000413899 PERM1Q5SV97 790 aa6.71□□□□□ -1.34
HMGB1P11-201ENST00000413899 PEAR1Q5VY43 1037 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P11-201ENST00000413899 ALG1LQ6GMV1 187 aa6.71□□□□□ -1.34
HMGB1P11-201ENST00000413899 CCDC74AQ96AQ1 378 aa6.71□□□□□ -1.34
HMGB1P11-201ENST00000413899 GHRHP01286 108 aa6.7□□□□□ -1.34
HMGB1P11-201ENST00000413899 POLR3DP05423 398 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P11-201ENST00000413899 HOXB4P17483 251 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P11-201ENST00000413899 EIF2AK2P19525 551 aaKnown RBP6.7□□□□□ -1.34
HMGB1P11-201ENST00000413899 MAPK8P45983 427 aa6.7□□□□□ -1.34
HMGB1P11-201ENST00000413899 KIAA0319Q5VV43 1072 aa6.7□□□□□ -1.34
HMGB1P11-201ENST00000413899 PSAPL1Q6NUJ1 521 aa6.7□□□□□ -1.34
HMGB1P11-201ENST00000413899 HFE2Q6ZVN8 426 aa6.7□□□□□ -1.34
HMGB1P11-201ENST00000413899 MICALL1Q8N3F8 863 aa6.7□□□□□ -1.34
HMGB1P11-201ENST00000413899 SPACA7Q96KW9 195 aa6.7□□□□□ -1.34
HMGB1P11-201ENST00000413899 RBSNQ9H1K0 784 aa6.7□□□□□ -1.34
HMGB1P11-201ENST00000413899 DZANK1Q9NVP4 752 aa6.7□□□□□ -1.34
HMGB1P11-201ENST00000413899 NFKBIEO00221 500 aa6.69□□□□□ -1.34
HMGB1P11-201ENST00000413899 PRPF40AO75400 957 aaKnown RBP6.69□□□□□ -1.34
HMGB1P11-201ENST00000413899 ALBP02768 609 aa6.69□□□□□ -1.34
HMGB1P11-201ENST00000413899 LDHBP07195 334 aaKnown RBP6.69□□□□□ -1.34
HMGB1P11-201ENST00000413899 DGKGP49619 791 aa6.69□□□□□ -1.34
HMGB1P11-201ENST00000413899 ATP2B2Q01814 1243 aa6.69□□□□□ -1.34
HMGB1P11-201ENST00000413899 ELMSAN1Q6PJG2 1045 aa6.69□□□□□ -1.34
HMGB1P11-201ENST00000413899 PLD4Q96BZ4 506 aa6.69□□□□□ -1.34
HMGB1P11-201ENST00000413899 PBX4Q9BYU1 374 aa6.69□□□□□ -1.34
HMGB1P11-201ENST00000413899 A0A1W2PP55 124 aa6.68□□□□□ -1.34
HMGB1P11-201ENST00000413899 RGS9O75916 674 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P11-201ENST00000413899 GRIK5Q16478 980 aa6.68□□□□□ -1.34
HMGB1P11-201ENST00000413899 CACTIN-AS1Q8N1I8 211 aa6.68□□□□□ -1.34
HMGB1P11-201ENST00000413899 TMEM102Q8N9M5 508 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P11-201ENST00000413899 FRMD6Q96NE9 622 aa6.68□□□□□ -1.34
HMGB1P11-201ENST00000413899 ZKSCAN3Q9BRR0 538 aa6.68□□□□□ -1.34
HMGB1P11-201ENST00000413899 SMG9Q9H0W8 520 aaKnown RBP6.68□□□□□ -1.34
HMGB1P11-201ENST00000413899 NPHS2Q9NP85 383 aa6.68□□□□□ -1.34
HMGB1P11-201ENST00000413899 LATS2Q9NRM7 1088 aa6.68□□□□□ -1.34
HMGB1P11-201ENST00000413899 RBM47A0AV96 593 aaKnown RBP6.67□□□□□ -1.34
HMGB1P11-201ENST00000413899 M0R082 166 aa6.67□□□□□ -1.34
HMGB1P11-201ENST00000413899 SMNDC1O75940 238 aaKnown RBP eCLIP6.67□□□□□ -1.34
HMGB1P11-201ENST00000413899 ACPPP15309 386 aa6.67□□□□□ -1.34
HMGB1P11-201ENST00000413899 AMPD1P23109 780 aa6.67□□□□□ -1.34
HMGB1P11-201ENST00000413899 ATP11AP98196 1134 aa6.67□□□□□ -1.34
HMGB1P11-201ENST00000413899 ILDR2Q71H61 639 aa6.67□□□□□ -1.34
HMGB1P11-201ENST00000413899 NEDD1Q8NHV4 660 aa6.67□□□□□ -1.34
HMGB1P11-201ENST00000413899 ZNF417Q8TAU3 575 aa6.67□□□□□ -1.34
HMGB1P11-201ENST00000413899 EPS8L3Q8TE67 593 aaKnown RBP6.67□□□□□ -1.34
HMGB1P11-201ENST00000413899 ZNF587Q96SQ5 575 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P11-201ENST00000413899 SETDB2Q96T68 719 aa6.67□□□□□ -1.34
HMGB1P11-201ENST00000413899 OSMRQ99650 979 aa6.67□□□□□ -1.34
HMGB1P11-201ENST00000413899 BHLHE41Q9C0J9 482 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P11-201ENST00000413899 RASSF4Q9H2L5 321 aa6.67□□□□□ -1.34
HMGB1P11-201ENST00000413899 SUV39H2Q9H5I1 410 aa6.67□□□□□ -1.34
HMGB1P11-201ENST00000413899 WWC3Q9ULE0 1092 aa6.67□□□□□ -1.34
HMGB1P11-201ENST00000413899 GIPC1O14908 333 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms