RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 RTL9Q8NET4 1388 aa33.44■■■□□ 2.94
VEGFA-207ENST00000413642 SCN4AP35499 1836 aa33.44■■■□□ 2.94
VEGFA-207ENST00000413642 CSF1RP07333 972 aa33.43■■■□□ 2.94
VEGFA-207ENST00000413642 GMPSP49915 693 aaPredicted RBP33.43■■■□□ 2.94
VEGFA-207ENST00000413642 EYA3Q99504 573 aa33.43■■■□□ 2.94
VEGFA-207ENST00000413642 KCNQ5Q9NR82 932 aa33.43■■■□□ 2.94
VEGFA-207ENST00000413642 GGA1Q9UJY5 639 aa33.43■■■□□ 2.94
VEGFA-207ENST00000413642 PNMA8AQ86V59 439 aaPredicted RBP33.42■■■□□ 2.94
VEGFA-207ENST00000413642 ITGA6P23229 1130 aa33.41■■■□□ 2.94
VEGFA-207ENST00000413642 FOXO4P98177 505 aa33.41■■■□□ 2.94
VEGFA-207ENST00000413642 BSDC1Q9NW68 430 aaPredicted RBP33.41■■■□□ 2.94
VEGFA-207ENST00000413642 MINPP1Q9UNW1 487 aa33.41■■■□□ 2.94
VEGFA-207ENST00000413642 CACNA1FO60840 1977 aa33.4■■■□□ 2.94
VEGFA-207ENST00000413642 EPHA10Q5JZY3 1008 aa33.4■■■□□ 2.94
VEGFA-207ENST00000413642 MAP1SQ66K74 1059 aaPredicted RBP33.4■■■□□ 2.94
VEGFA-207ENST00000413642 ZC3H12CQ9C0D7 883 aaKnown RBP33.4■■■□□ 2.94
VEGFA-207ENST00000413642 GPRC5DQ9NZD1 345 aa33.4■■■□□ 2.94
VEGFA-207ENST00000413642 XDHP47989 1333 aa33.39■■■□□ 2.94
VEGFA-207ENST00000413642 GRM8O00222 908 aa33.39■■■□□ 2.94
VEGFA-207ENST00000413642 ECE2O60344 883 aa33.39■■■□□ 2.94
VEGFA-207ENST00000413642 TNIP1Q15025 636 aa33.39■■■□□ 2.94
VEGFA-207ENST00000413642 SRCIN1Q9C0H9 1055 aa33.39■■■□□ 2.94
VEGFA-207ENST00000413642 ALDH1L1O75891 902 aa33.38■■■□□ 2.93
VEGFA-207ENST00000413642 CEP350Q5VT06 3117 aa33.38■■■□□ 2.93
VEGFA-207ENST00000413642 SHTN1A0MZ66 631 aa33.37■■■□□ 2.93
VEGFA-207ENST00000413642 ITGBL1O95965 494 aaPredicted RBP33.37■■■□□ 2.93
VEGFA-207ENST00000413642 ZBTB12Q9Y330 459 aaPredicted RBP33.37■■■□□ 2.93
VEGFA-207ENST00000413642 PSMD14O00487 310 aa33.36■■■□□ 2.93
VEGFA-207ENST00000413642 IGHMBP2P38935 993 aaKnown RBP33.36■■■□□ 2.93
VEGFA-207ENST00000413642 C9orf78Q9NZ63 289 aaPredicted RBP33.36■■■□□ 2.93
VEGFA-207ENST00000413642 ATP2B4P23634 1241 aa33.35■■■□□ 2.93
VEGFA-207ENST00000413642 ADAMTSL1Q8N6G6 1762 aa33.34■■■□□ 2.93
VEGFA-207ENST00000413642 PASKQ96RG2 1323 aa33.34■■■□□ 2.93
VEGFA-207ENST00000413642 LMBR1LQ6UX01 489 aa33.34■■■□□ 2.93
VEGFA-207ENST00000413642 CNTROBQ8N137 903 aa33.34■■■□□ 2.93
VEGFA-207ENST00000413642 CHMP3Q9Y3E7 222 aa33.34■■■□□ 2.93
VEGFA-207ENST00000413642 USP50Q70EL3 339 aaPredicted RBP33.33■■■□□ 2.93
VEGFA-207ENST00000413642 PTPRCP08575 1304 aa33.32■■■□□ 2.93
VEGFA-207ENST00000413642 ANKRD18BA2A2Z9 1011 aa33.32■■■□□ 2.92
VEGFA-207ENST00000413642 ALDH1L2Q3SY69 923 aa33.32■■■□□ 2.92
VEGFA-207ENST00000413642 KLRG1Q96E93 195 aa33.32■■■□□ 2.92
VEGFA-207ENST00000413642 ADARB2Q9NS39 739 aaKnown RBP33.32■■■□□ 2.92
VEGFA-207ENST00000413642 SMC4Q9NTJ3 1288 aa33.32■■■□□ 2.92
VEGFA-207ENST00000413642 G3V3G9 751 aa33.31■■■□□ 2.92
VEGFA-207ENST00000413642 NBPF7P0C2Y1 421 aaPredicted RBP33.31■■■□□ 2.92
VEGFA-207ENST00000413642 DCAF8Q5TAQ9 597 aa33.31■■■□□ 2.92
VEGFA-207ENST00000413642 SUCLG2Q96I99 432 aa33.31■■■□□ 2.92
VEGFA-207ENST00000413642 MPHOSPH8Q99549 860 aa33.31■■■□□ 2.92
VEGFA-207ENST00000413642 CNOT7Q9UIV1 285 aaKnown RBP33.31■■■□□ 2.92
VEGFA-207ENST00000413642 CCT4P50991 539 aaKnown RBP33.3■■■□□ 2.92
VEGFA-207ENST00000413642 KAZALD1Q96I82 304 aa33.3■■■□□ 2.92
VEGFA-207ENST00000413642 MYH3P11055 1940 aa33.3■■■□□ 2.92
VEGFA-207ENST00000413642 FMR1Q06787 632 aaKnown RBP eCLIP33.29■■■□□ 2.92
VEGFA-207ENST00000413642 IFIT5Q13325 482 aaKnown RBP33.29■■■□□ 2.92
VEGFA-207ENST00000413642 HIRAP54198 1017 aaPredicted RBP33.28■■■□□ 2.92
VEGFA-207ENST00000413642 MICALL2Q8IY33 904 aa33.28■■■□□ 2.92
VEGFA-207ENST00000413642 TRPM4Q8TD43 1214 aa33.28■■■□□ 2.92
VEGFA-207ENST00000413642 ZNF594Q96JF6 807 aaPredicted RBP33.28■■■□□ 2.92
VEGFA-207ENST00000413642 TXNRD3Q86VQ6 643 aa33.27■■■□□ 2.92
VEGFA-207ENST00000413642 KLRK1P26718 216 aa33.26■■■□□ 2.91
VEGFA-207ENST00000413642 CHRNDQ07001 517 aa33.26■■■□□ 2.91
VEGFA-207ENST00000413642 CREBZFQ9NS37 354 aa33.26■■■□□ 2.91
VEGFA-207ENST00000413642 SPEF2Q9C093 1822 aa33.25■■■□□ 2.91
VEGFA-207ENST00000413642 HELBQ8NG08 1087 aaPredicted RBP33.25■■■□□ 2.91
VEGFA-207ENST00000413642 DPF2Q92785 391 aa33.25■■■□□ 2.91
VEGFA-207ENST00000413642 UTYO14607 1347 aa33.25■■■□□ 2.91
VEGFA-207ENST00000413642 SNAP23O00161 211 aa33.24■■■□□ 2.91
VEGFA-207ENST00000413642 VIL1P09327 827 aaKnown RBP33.24■■■□□ 2.91
VEGFA-207ENST00000413642 SAMD7Q7Z3H4 446 aa33.24■■■□□ 2.91
VEGFA-207ENST00000413642 ANKRD2Q9GZV1 360 aa33.24■■■□□ 2.91
VEGFA-207ENST00000413642 LEMD3Q9Y2U8 911 aa33.24■■■□□ 2.91
VEGFA-207ENST00000413642 MED23Q9ULK4 1368 aa33.23■■■□□ 2.91
VEGFA-207ENST00000413642 H7C1D1 291 aa33.23■■■□□ 2.91
VEGFA-207ENST00000413642 TAF5LO75529 589 aa33.23■■■□□ 2.91
VEGFA-207ENST00000413642 EGFRP00533 1210 aa33.23■■■□□ 2.91
VEGFA-207ENST00000413642 CT47B1P0C2W7 299 aaPredicted RBP33.23■■■□□ 2.91
VEGFA-207ENST00000413642 NOB1Q9ULX3 412 aaKnown RBP33.23■■■□□ 2.91
VEGFA-207ENST00000413642 ZNF804BA4D1E1 1349 aa33.23■■■□□ 2.91
VEGFA-207ENST00000413642 TRAF5O00463 557 aa33.22■■■□□ 2.91
VEGFA-207ENST00000413642 CCDC57Q2TAC2 916 aa33.22■■■□□ 2.91
VEGFA-207ENST00000413642 HNRNPUQ00839 825 aaKnown RBP eCLIP33.21■■■□□ 2.918e-7■□□□□ 10.9
VEGFA-207ENST00000413642 USP44Q9H0E7 712 aa33.21■■■□□ 2.91
VEGFA-207ENST00000413642 MKRN1Q9UHC7 482 aaKnown RBP33.21■■■□□ 2.91
VEGFA-207ENST00000413642 TMEM88BA6NKF7 163 aa33.2■■■□□ 2.91
VEGFA-207ENST00000413642 RPS12P25398 132 aaKnown RBP33.2■■■□□ 2.91
VEGFA-207ENST00000413642 RARSP54136 660 aaKnown RBP33.2■■■□□ 2.91
VEGFA-207ENST00000413642 TBC1D10BQ4KMP7 808 aaPredicted RBP33.2■■■□□ 2.91
VEGFA-207ENST00000413642 RBM26Q5T8P6 1007 aaKnown RBP33.2■■■□□ 2.91
VEGFA-207ENST00000413642 PODNQ7Z5L7 613 aa33.2■■■□□ 2.91
VEGFA-207ENST00000413642 BICC1Q9H694 974 aaKnown RBP33.2■■■□□ 2.91
VEGFA-207ENST00000413642 SCN9AQ15858 1988 aa33.2■■■□□ 2.9
VEGFA-207ENST00000413642 TAF7LQ5H9L4 462 aa33.19■■■□□ 2.9
VEGFA-207ENST00000413642 JMYQ8N9B5 988 aa33.19■■■□□ 2.9
VEGFA-207ENST00000413642 PGAP2Q9UHJ9 254 aa33.19■■■□□ 2.9
VEGFA-207ENST00000413642 KCNJ4P48050 445 aa33.18■■■□□ 2.9
VEGFA-207ENST00000413642 RSBN1LQ6PCB5 846 aaPredicted RBP33.18■■■□□ 2.9
VEGFA-207ENST00000413642 LDHAL6AQ6ZMR3 332 aa33.18■■■□□ 2.9
VEGFA-207ENST00000413642 ANKRD44Q8N8A2 993 aa33.18■■■□□ 2.9
VEGFA-207ENST00000413642 GLIS2Q9BZE0 524 aaPredicted RBP33.18■■■□□ 2.9
VEGFA-207ENST00000413642 MXD3Q9BW11 206 aa33.17■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 271.2 ms