RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 CELF1Q92879 486 aaKnown RBP8.06□□□□□ -1.12
USP54-202ENST00000413442 GGA1Q9UJY5 639 aa8.06□□□□□ -1.12
USP54-202ENST00000413442 FBXO3Q9UK99 471 aa8.06□□□□□ -1.12
USP54-202ENST00000413442 GOLGB1Q14789 3259 aaKnown RBP8.06□□□□□ -1.12
USP54-202ENST00000413442 TCERG1O14776 1098 aaKnown RBP8.05□□□□□ -1.12
USP54-202ENST00000413442 MS4A1P11836 297 aa8.05□□□□□ -1.12
USP54-202ENST00000413442 CXCL9Q07325 125 aa8.05□□□□□ -1.12
USP54-202ENST00000413442 CHADLQ6NUI6 762 aa8.05□□□□□ -1.12
USP54-202ENST00000413442 SLC4A10Q6U841 1118 aa8.05□□□□□ -1.12
USP54-202ENST00000413442 TAF1DQ9H5J8 278 aaPredicted RBP8.05□□□□□ -1.12
USP54-202ENST00000413442 SMC4Q9NTJ3 1288 aa8.05□□□□□ -1.12
USP54-202ENST00000413442 MINPP1Q9UNW1 487 aa8.05□□□□□ -1.12
USP54-202ENST00000413442 ZBED9Q6R2W3 1325 aa8.04□□□□□ -1.12
USP54-202ENST00000413442 TAF1P21675 1872 aa8.04□□□□□ -1.12
USP54-202ENST00000413442 H7C1D1 291 aa8.04□□□□□ -1.12
USP54-202ENST00000413442 ITGA6P23229 1130 aa8.04□□□□□ -1.12
USP54-202ENST00000413442 EPHX2P34913 555 aa8.04□□□□□ -1.12
USP54-202ENST00000413442 RARSP54136 660 aaKnown RBP8.04□□□□□ -1.12
USP54-202ENST00000413442 FOXO4P98177 505 aa8.04□□□□□ -1.12
USP54-202ENST00000413442 AOC3Q16853 763 aa8.04□□□□□ -1.12
USP54-202ENST00000413442 RABL6Q3YEC7 729 aaPredicted RBP8.04□□□□□ -1.12
USP54-202ENST00000413442 AGBL3Q8NEM8 1001 aa8.04□□□□□ -1.12
USP54-202ENST00000413442 CDCA7LQ96GN5 454 aa8.04□□□□□ -1.12
USP54-202ENST00000413442 COA1Q9GZY4 146 aa8.04□□□□□ -1.12
USP54-202ENST00000413442 SEC31BQ9NQW1 1179 aa8.04□□□□□ -1.12
USP54-202ENST00000413442 ADARB2Q9NS39 739 aaKnown RBP8.04□□□□□ -1.12
USP54-202ENST00000413442 POLLQ9UGP5 575 aa8.04□□□□□ -1.12
USP54-202ENST00000413442 PGAP2Q9UHJ9 254 aa8.04□□□□□ -1.12
USP54-202ENST00000413442 MYO3BQ8WXR4 1341 aa8.03□□□□□ -1.12
USP54-202ENST00000413442 ZNF609O15014 1411 aa8.03□□□□□ -1.12
USP54-202ENST00000413442 UTRNP46939 3433 aa8.03□□□□□ -1.12
USP54-202ENST00000413442 MED23Q9ULK4 1368 aa8.03□□□□□ -1.12
USP54-202ENST00000413442 F6X3S4 739 aa8.03□□□□□ -1.12
USP54-202ENST00000413442 GNAI3P08754 354 aa8.03□□□□□ -1.12
USP54-202ENST00000413442 VIL1P09327 827 aaKnown RBP8.03□□□□□ -1.12
USP54-202ENST00000413442 GPSM2P81274 684 aa8.03□□□□□ -1.12
USP54-202ENST00000413442 HNRNPUQ00839 825 aaKnown RBP eCLIP8.03□□□□□ -1.12
USP54-202ENST00000413442 CACNB1Q02641 598 aaPredicted RBP8.03□□□□□ -1.12
USP54-202ENST00000413442 INTS3Q68E01 1043 aaKnown RBP8.03□□□□□ -1.12
USP54-202ENST00000413442 LMBR1LQ6UX01 489 aa8.03□□□□□ -1.12
USP54-202ENST00000413442 OLFM4Q6UX06 510 aa8.03□□□□□ -1.12
USP54-202ENST00000413442 LDHAL6AQ6ZMR3 332 aa8.03□□□□□ -1.12
USP54-202ENST00000413442 CHMP4BQ9H444 224 aaKnown RBP8.03□□□□□ -1.12
USP54-202ENST00000413442 GREM2Q9H772 168 aa8.03□□□□□ -1.12
USP54-202ENST00000413442 GPRC5DQ9NZD1 345 aa8.03□□□□□ -1.12
USP54-202ENST00000413442 MROH5Q6ZUA9 1318 aa8.03□□□□□ -1.12
USP54-202ENST00000413442 SENP3-EIF4A1A0A087X0R7 540 aa8.02□□□□□ -1.13
USP54-202ENST00000413442 ZBTB22O15209 634 aa8.02□□□□□ -1.13
USP54-202ENST00000413442 UFL1O94874 794 aa8.02□□□□□ -1.13
USP54-202ENST00000413442 FKBP1AP62942 108 aaKnown RBP8.02□□□□□ -1.13
USP54-202ENST00000413442 UBE4AQ14139 1066 aa8.02□□□□□ -1.13
USP54-202ENST00000413442 TAF7LQ5H9L4 462 aa8.02□□□□□ -1.13
USP54-202ENST00000413442 STRIP1Q5VSL9 837 aa8.02□□□□□ -1.13
USP54-202ENST00000413442 BCL2L13Q9BXK5 485 aa8.02□□□□□ -1.13
USP54-202ENST00000413442 USP44Q9H0E7 712 aa8.02□□□□□ -1.13
USP54-202ENST00000413442 GJA3Q9Y6H8 435 aa8.02□□□□□ -1.13
USP54-202ENST00000413442 ZNF804BA4D1E1 1349 aa8.02□□□□□ -1.13
USP54-202ENST00000413442 LTBP1Q14766 1721 aa8.01□□□□□ -1.13
USP54-202ENST00000413442 USP17L3A6NCW0 530 aa8.01□□□□□ -1.13
USP54-202ENST00000413442 USP17L4A6NCW7 530 aa8.01□□□□□ -1.13
USP54-202ENST00000413442 ECE2O60344 883 aa8.01□□□□□ -1.13
USP54-202ENST00000413442 SCNN1DP51172 638 aa8.01□□□□□ -1.13
USP54-202ENST00000413442 USP17L1Q7RTZ2 530 aa8.01□□□□□ -1.13
USP54-202ENST00000413442 OGFOD1Q8N543 542 aa8.01□□□□□ -1.13
USP54-202ENST00000413442 CNNM1Q9NRU3 951 aa8.01□□□□□ -1.13
USP54-202ENST00000413442 CREBZFQ9NS37 354 aa8.01□□□□□ -1.13
USP54-202ENST00000413442 CNOT7Q9UIV1 285 aaKnown RBP8.01□□□□□ -1.13
USP54-202ENST00000413442 NOB1Q9ULX3 412 aaKnown RBP8.01□□□□□ -1.13
USP54-202ENST00000413442 CLEC11AQ9Y240 323 aa8.01□□□□□ -1.13
USP54-202ENST00000413442 PSME4Q14997 1843 aa8.01□□□□□ -1.13
USP54-202ENST00000413442 ZNF541Q9H0D2 1346 aa8.01□□□□□ -1.13
USP54-202ENST00000413442 RIMBP2O15034 1052 aa8□□□□□ -1.13
USP54-202ENST00000413442 IGSF3O75054 1194 aa8□□□□□ -1.13
USP54-202ENST00000413442 ITGBL1O95965 494 aaPredicted RBP8□□□□□ -1.13
USP54-202ENST00000413442 NBPF7P0C2Y1 421 aaPredicted RBP8□□□□□ -1.13
USP54-202ENST00000413442 UBTFL1P0CB47 393 aaPredicted RBP8□□□□□ -1.13
USP54-202ENST00000413442 KCNJ4P48050 445 aa8□□□□□ -1.13
USP54-202ENST00000413442 CHRNDQ07001 517 aa8□□□□□ -1.13
USP54-202ENST00000413442 ZKSCAN2Q63HK3 967 aa8□□□□□ -1.13
USP54-202ENST00000413442 ATF7IPQ6VMQ6 1270 aa8□□□□□ -1.13
USP54-202ENST00000413442 CDC37L1Q7L3B6 337 aa8□□□□□ -1.13
USP54-202ENST00000413442 ZNF804AQ7Z570 1209 aa8□□□□□ -1.13
USP54-202ENST00000413442 CNTROBQ8N137 903 aa8□□□□□ -1.13
USP54-202ENST00000413442 JARID2Q92833 1246 aaPredicted RBP8□□□□□ -1.13
USP54-202ENST00000413442 TMEM88BA6NKF7 163 aa7.99□□□□□ -1.13
USP54-202ENST00000413442 YDJCA8MPS7 323 aa7.99□□□□□ -1.13
USP54-202ENST00000413442 RAD17O75943 681 aa7.99□□□□□ -1.13
USP54-202ENST00000413442 CIAO1O76071 339 aa7.99□□□□□ -1.13
USP54-202ENST00000413442 SASH1O94885 1247 aa7.99□□□□□ -1.13
USP54-202ENST00000413442 PDE8BO95263 885 aa7.99□□□□□ -1.13
USP54-202ENST00000413442 IL1R1P14778 569 aa7.99□□□□□ -1.13
USP54-202ENST00000413442 EPS15P42566 896 aa7.99□□□□□ -1.13
USP54-202ENST00000413442 GMPSP49915 693 aaPredicted RBP7.99□□□□□ -1.13
USP54-202ENST00000413442 FAM161AQ3B820 660 aa7.99□□□□□ -1.13
USP54-202ENST00000413442 CAVIN4Q5BKX8 364 aa7.99□□□□□ -1.13
USP54-202ENST00000413442 TTLL5Q6EMB2 1281 aa7.99□□□□□ -1.13
USP54-202ENST00000413442 RSBN1LQ6PCB5 846 aaPredicted RBP7.99□□□□□ -1.13
USP54-202ENST00000413442 DNAJC5GQ8N7S2 189 aa7.99□□□□□ -1.13
USP54-202ENST00000413442 HHIPL1Q96JK4 782 aa7.99□□□□□ -1.13
USP54-202ENST00000413442 MRIQ9BWK5 157 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms