RNA–Protein interactions for RNA: ENST00000413366.7

PRKCA-202, Transcript of protein kinase C alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCA, Length 8,751 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-202ENST00000413366 MKRN1Q9UHC7 482 aaKnown RBP8.65□□□□□ -1.03
PRKCA-202ENST00000413366 TMEM67Q5HYA8 995 aa8.64□□□□□ -1.03
PRKCA-202ENST00000413366 TCP11L1Q9NUJ3 509 aa8.64□□□□□ -1.03
PRKCA-202ENST00000413366 CCDC113Q9H0I3 377 aa8.64□□□□□ -1.03
PRKCA-202ENST00000413366 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.64□□□□□ -1.03
PRKCA-202ENST00000413366 ERCC3P19447 782 aa8.64□□□□□ -1.03
PRKCA-202ENST00000413366 POTEDQ86YR6 584 aa8.64□□□□□ -1.03
PRKCA-202ENST00000413366 USP37Q86T82 979 aa8.64□□□□□ -1.03
PRKCA-202ENST00000413366 CCDC82Q8N4S0 544 aa8.64□□□□□ -1.03
PRKCA-202ENST00000413366 CABLES1Q8TDN4 633 aa8.64□□□□□ -1.03
PRKCA-202ENST00000413366 RAPGEF6Q8TEU7 1601 aa8.64□□□□□ -1.03
PRKCA-202ENST00000413366 PHACTR2O75167 634 aa8.64□□□□□ -1.03
PRKCA-202ENST00000413366 MX1P20591 662 aa8.64□□□□□ -1.03
PRKCA-202ENST00000413366 CYP7A1P22680 504 aa8.64□□□□□ -1.03
PRKCA-202ENST00000413366 SPA17Q15506 151 aa8.64□□□□□ -1.03
PRKCA-202ENST00000413366 CCDC50Q8IVM0 306 aa8.64□□□□□ -1.03
PRKCA-202ENST00000413366 EMILIN1Q9Y6C2 1016 aa8.64□□□□□ -1.03
PRKCA-202ENST00000413366 PPIP5K1Q6PFW1 1433 aa8.64□□□□□ -1.03
PRKCA-202ENST00000413366 ZNF518AQ6AHZ1 1483 aa8.64□□□□□ -1.03
PRKCA-202ENST00000413366 ZBTB24O43167 697 aaPredicted RBP8.64□□□□□ -1.03
PRKCA-202ENST00000413366 TRERF1Q96PN7 1200 aa8.64□□□□□ -1.03
PRKCA-202ENST00000413366 EP400NLQ6ZTU2 488 aa8.64□□□□□ -1.03
PRKCA-202ENST00000413366 GEMIN8Q9NWZ8 242 aaKnown RBP8.64□□□□□ -1.03
PRKCA-202ENST00000413366 PIK3R4Q99570 1358 aa8.63□□□□□ -1.03
PRKCA-202ENST00000413366 ARHGEF6Q15052 776 aa8.63□□□□□ -1.03
PRKCA-202ENST00000413366 NUCKS1Q9H1E3 243 aaKnown RBP8.63□□□□□ -1.03
PRKCA-202ENST00000413366 ARAP1Q96P48 1450 aa8.63□□□□□ -1.03
PRKCA-202ENST00000413366 CCDC171Q6TFL3 1326 aa8.63□□□□□ -1.03
PRKCA-202ENST00000413366 TSNARE1Q96NA8 513 aa8.63□□□□□ -1.03
PRKCA-202ENST00000413366 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.63□□□□□ -1.03
PRKCA-202ENST00000413366 NAA16Q6N069 864 aaPredicted RBP8.63□□□□□ -1.03
PRKCA-202ENST00000413366 NIM1KQ8IY84 436 aa8.63□□□□□ -1.03
PRKCA-202ENST00000413366 ZNF772Q68DY9 489 aaPredicted RBP8.63□□□□□ -1.03
PRKCA-202ENST00000413366 HOOK3Q86VS8 718 aa8.63□□□□□ -1.03
PRKCA-202ENST00000413366 UPF3BQ9BZI7 483 aaKnown RBP8.63□□□□□ -1.03
PRKCA-202ENST00000413366 SPATS2LQ9NUQ6 558 aaKnown RBP8.63□□□□□ -1.03
PRKCA-202ENST00000413366 PDE6BP35913 854 aa8.63□□□□□ -1.03
PRKCA-202ENST00000413366 FAM98CQ17RN3 349 aaKnown RBP8.63□□□□□ -1.03
PRKCA-202ENST00000413366 UBE3BQ7Z3V4 1068 aa8.63□□□□□ -1.03
PRKCA-202ENST00000413366 C8orf76Q96K31 380 aa8.63□□□□□ -1.03
PRKCA-202ENST00000413366 EXOC6BQ9Y2D4 811 aa8.63□□□□□ -1.03
PRKCA-202ENST00000413366 PTPRCP08575 1304 aa8.63□□□□□ -1.03
PRKCA-202ENST00000413366 NSFL1CQ9UNZ2 370 aaKnown RBP8.63□□□□□ -1.03
PRKCA-202ENST00000413366 PRC1O43663 620 aa8.62□□□□□ -1.03
PRKCA-202ENST00000413366 SFPQP23246 707 aaKnown RBP eCLIP8.62□□□□□ -1.032e-6■■■□□ 15.5
PRKCA-202ENST00000413366 IFIT1BQ5T764 474 aaKnown RBP8.62□□□□□ -1.03
PRKCA-202ENST00000413366 NAP1L3Q99457 506 aaPredicted RBP8.62□□□□□ -1.03
PRKCA-202ENST00000413366 STX8Q9UNK0 236 aa8.62□□□□□ -1.03
PRKCA-202ENST00000413366 KMT5BQ4FZB7 885 aa8.62□□□□□ -1.03
PRKCA-202ENST00000413366 PRPF40BQ6NWY9 871 aaKnown RBP8.62□□□□□ -1.03
PRKCA-202ENST00000413366 ARHGAP27Q6ZUM4 889 aa8.62□□□□□ -1.03
PRKCA-202ENST00000413366 LARGE2Q8N3Y3 721 aa8.62□□□□□ -1.03
PRKCA-202ENST00000413366 STX6O43752 255 aa8.62□□□□□ -1.03
PRKCA-202ENST00000413366 CALM1P0DP23 149 aa8.62□□□□□ -1.03
PRKCA-202ENST00000413366 CALM2P0DP24 149 aa8.62□□□□□ -1.03
PRKCA-202ENST00000413366 CALM3P0DP25 149 aa8.62□□□□□ -1.03
PRKCA-202ENST00000413366 MSL1Q68DK7 614 aa8.62□□□□□ -1.03
PRKCA-202ENST00000413366 SLC4A4Q9Y6R1 1079 aa8.62□□□□□ -1.03
PRKCA-202ENST00000413366 MAGEB6P1A0A0J9YX57 407 aa8.62□□□□□ -1.03
PRKCA-202ENST00000413366 ANKRD13DQ6ZTN6 518 aa8.62□□□□□ -1.03
PRKCA-202ENST00000413366 CCDC144CPQ8IYA2 1237 aa8.62□□□□□ -1.03
PRKCA-202ENST00000413366 KRT23Q9C075 422 aa8.62□□□□□ -1.03
PRKCA-202ENST00000413366 UBE4AQ14139 1066 aa8.62□□□□□ -1.03
PRKCA-202ENST00000413366 CCDC83Q8IWF9 413 aa8.62□□□□□ -1.03
PRKCA-202ENST00000413366 NUP62CLQ9H1M0 184 aa8.62□□□□□ -1.03
PRKCA-202ENST00000413366 MACROD2A1Z1Q3 448 aa8.62□□□□□ -1.03
PRKCA-202ENST00000413366 KIF3CO14782 793 aa8.62□□□□□ -1.03
PRKCA-202ENST00000413366 ZNF500O60304 480 aaPredicted RBP8.61□□□□□ -1.03
PRKCA-202ENST00000413366 SEPT14Q6ZU15 432 aa8.61□□□□□ -1.03
PRKCA-202ENST00000413366 THUMPD2Q9BTF0 503 aaKnown RBP8.61□□□□□ -1.03
PRKCA-202ENST00000413366 NSD2O96028 1365 aa8.61□□□□□ -1.03
PRKCA-202ENST00000413366 SPDYE3A6NKU9 549 aa8.61□□□□□ -1.03
PRKCA-202ENST00000413366 SLC5A4Q9NY91 659 aa8.61□□□□□ -1.03
PRKCA-202ENST00000413366 NOLC1Q14978 699 aaKnown RBP eCLIP8.61□□□□□ -1.03
PRKCA-202ENST00000413366 FAM212AQ96EL1 285 aa8.61□□□□□ -1.03
PRKCA-202ENST00000413366 ZRANB1Q9UGI0 708 aa8.61□□□□□ -1.03
PRKCA-202ENST00000413366 ABCC11Q96J66 1382 aa8.61□□□□□ -1.03
PRKCA-202ENST00000413366 URB2Q14146 1524 aaKnown RBP8.61□□□□□ -1.03
PRKCA-202ENST00000413366 TCERG1LQ5VWI1 586 aa8.61□□□□□ -1.03
PRKCA-202ENST00000413366 HEATR3Q7Z4Q2 680 aa8.61□□□□□ -1.03
PRKCA-202ENST00000413366 PYM1Q9BRP8 204 aaKnown RBP8.61□□□□□ -1.03
PRKCA-202ENST00000413366 CEP83Q9Y592 693 aa8.61□□□□□ -1.03
PRKCA-202ENST00000413366 M0QZ92 97 aa8.61□□□□□ -1.03
PRKCA-202ENST00000413366 LDHBP07195 334 aaKnown RBP8.61□□□□□ -1.03
PRKCA-202ENST00000413366 EVI5LQ96CN4 794 aa8.61□□□□□ -1.03
PRKCA-202ENST00000413366 MMRN2Q9H8L6 949 aa8.61□□□□□ -1.03
PRKCA-202ENST00000413366 CCDC172P0C7W6 258 aa8.61□□□□□ -1.03
PRKCA-202ENST00000413366 CCDC40Q4G0X9 1142 aa8.61□□□□□ -1.03
PRKCA-202ENST00000413366 RPAINQ86UA6 219 aa8.61□□□□□ -1.03
PRKCA-202ENST00000413366 EBAG9O00559 213 aa8.61□□□□□ -1.03
PRKCA-202ENST00000413366 BIRC2Q13490 618 aa8.61□□□□□ -1.03
PRKCA-202ENST00000413366 TAOK3Q9H2K8 898 aa8.61□□□□□ -1.03
PRKCA-202ENST00000413366 C6orf50Q9HD87 102 aa8.61□□□□□ -1.03
PRKCA-202ENST00000413366 BCS1LQ9Y276 419 aa8.61□□□□□ -1.03
PRKCA-202ENST00000413366 H7C1D1 291 aa8.6□□□□□ -1.03
PRKCA-202ENST00000413366 NOL3O60936 208 aaKnown RBP8.6□□□□□ -1.03
PRKCA-202ENST00000413366 ALDH1L2Q3SY69 923 aa8.6□□□□□ -1.03
PRKCA-202ENST00000413366 AKAP4Q5JQC9 854 aa8.6□□□□□ -1.03
PRKCA-202ENST00000413366 SH2D4BQ5SQS7 431 aa8.6□□□□□ -1.03
PRKCA-202ENST00000413366 GOPCQ9HD26 462 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms