RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 NUTM2BA6NNL0 878 aaPredicted RBP15.49■□□□□ 0.07
LITAF-203ENST00000413364 NUTM2EB1AL46 878 aaPredicted RBP15.49■□□□□ 0.07
LITAF-203ENST00000413364 CSF1RP07333 972 aa15.49■□□□□ 0.07
LITAF-203ENST00000413364 ZKSCAN1P17029 563 aaPredicted RBP15.49■□□□□ 0.07
LITAF-203ENST00000413364 NLRP10Q86W26 655 aa15.49■□□□□ 0.07
LITAF-203ENST00000413364 NUTM2AQ8IVF1 878 aaPredicted RBP15.49■□□□□ 0.07
LITAF-203ENST00000413364 NEUROD6Q96NK8 337 aa15.49■□□□□ 0.07
LITAF-203ENST00000413364 ERVV-1B6SEH8 477 aa15.48■□□□□ 0.07
LITAF-203ENST00000413364 CASTP20810 708 aaKnown RBP15.48■□□□□ 0.07
LITAF-203ENST00000413364 IL6STP40189 918 aaPredicted RBP15.48■□□□□ 0.07
LITAF-203ENST00000413364 KCNJ4P48050 445 aa15.48■□□□□ 0.07
LITAF-203ENST00000413364 CREB3L3Q68CJ9 461 aa15.48■□□□□ 0.07
LITAF-203ENST00000413364 JAKMIP1Q96N16 626 aaKnown RBP15.48■□□□□ 0.07
LITAF-203ENST00000413364 PUS3Q9BZE2 481 aaKnown RBP15.48■□□□□ 0.07
LITAF-203ENST00000413364 ZSWIM6Q9HCJ5 1215 aa15.48■□□□□ 0.07
LITAF-203ENST00000413364 SLIT2O94813 1529 aa15.48■□□□□ 0.07
LITAF-203ENST00000413364 NWD2Q9ULI1 1742 aa15.48■□□□□ 0.07
LITAF-203ENST00000413364 TOM1O60784 492 aa15.48■□□□□ 0.07
LITAF-203ENST00000413364 AK2P54819 239 aa15.48■□□□□ 0.07
LITAF-203ENST00000413364 TIMM10P62072 90 aa15.48■□□□□ 0.07
LITAF-203ENST00000413364 BARGINQ6ZT62 677 aa15.48■□□□□ 0.07
LITAF-203ENST00000413364 HOMEZQ8IX15 550 aa15.48■□□□□ 0.07
LITAF-203ENST00000413364 CEP126Q9P2H0 1117 aa15.48■□□□□ 0.07
LITAF-203ENST00000413364 LIMCH1Q9UPQ0 1083 aa15.48■□□□□ 0.07
LITAF-203ENST00000413364 ADCK5Q3MIX3 580 aa15.47■□□□□ 0.07
LITAF-203ENST00000413364 RUFY3Q7L099 469 aa15.47■□□□□ 0.07
LITAF-203ENST00000413364 TICAM2Q86XR7 235 aa15.47■□□□□ 0.07
LITAF-203ENST00000413364 MARCH10Q8NA82 808 aaPredicted RBP15.47■□□□□ 0.07
LITAF-203ENST00000413364 CGNQ9P2M7 1197 aaKnown RBP15.47■□□□□ 0.07
LITAF-203ENST00000413364 KAT6BQ8WYB5 2073 aa15.47■□□□□ 0.07
LITAF-203ENST00000413364 SLC27A2O14975 620 aa15.47■□□□□ 0.07
LITAF-203ENST00000413364 GPTP24298 496 aa15.47■□□□□ 0.07
LITAF-203ENST00000413364 MMP14P50281 582 aa15.47■□□□□ 0.07
LITAF-203ENST00000413364 VPS53Q5VIR6 699 aa15.47■□□□□ 0.07
LITAF-203ENST00000413364 ZNF589Q86UQ0 364 aaPredicted RBP15.47■□□□□ 0.07
LITAF-203ENST00000413364 KBTBD3Q8NAB2 608 aa15.47■□□□□ 0.07
LITAF-203ENST00000413364 CYP46A1Q9Y6A2 500 aa15.47■□□□□ 0.07
LITAF-203ENST00000413364 NDUFB9Q9Y6M9 179 aa15.47■□□□□ 0.07
LITAF-203ENST00000413364 ANKRD36CQ5JPF3 1778 aa15.46■□□□□ 0.07
LITAF-203ENST00000413364 A0A1B0GUL7 405 aa15.46■□□□□ 0.07
LITAF-203ENST00000413364 CLGNO14967 610 aa15.46■□□□□ 0.07
LITAF-203ENST00000413364 TAF5LO75529 589 aa15.46■□□□□ 0.07
LITAF-203ENST00000413364 PIP4K2BP78356 416 aa15.46■□□□□ 0.07
LITAF-203ENST00000413364 IFIT5Q13325 482 aaKnown RBP15.46■□□□□ 0.07
LITAF-203ENST00000413364 RNF20Q5VTR2 975 aa15.46■□□□□ 0.07
LITAF-203ENST00000413364 DZIP3Q86Y13 1208 aaKnown RBP15.46■□□□□ 0.07
LITAF-203ENST00000413364 PDRG1Q9NUG6 133 aa15.46■□□□□ 0.07
LITAF-203ENST00000413364 PALLDQ8WX93 1383 aa15.46■□□□□ 0.07
LITAF-203ENST00000413364 BRD1O95696 1058 aa15.46■□□□□ 0.06
LITAF-203ENST00000413364 DDX46Q7L014 1031 aaKnown RBP15.46■□□□□ 0.06
LITAF-203ENST00000413364 CCDC9Q9Y3X0 531 aaKnown RBP15.46■□□□□ 0.06
LITAF-203ENST00000413364 RPAP1Q9BWH6 1393 aaPredicted RBP15.46■□□□□ 0.06
LITAF-203ENST00000413364 CPA1P15085 419 aa15.45■□□□□ 0.06
LITAF-203ENST00000413364 NASPP49321 788 aaPredicted RBP15.45■□□□□ 0.06
LITAF-203ENST00000413364 MCTP1Q6DN14 999 aa15.45■□□□□ 0.06
LITAF-203ENST00000413364 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.45■□□□□ 0.06
LITAF-203ENST00000413364 PAG1Q9NWQ8 432 aa15.45■□□□□ 0.06
LITAF-203ENST00000413364 HMG20BQ9P0W2 317 aa15.45■□□□□ 0.06
LITAF-203ENST00000413364 AKAP2Q9Y2D5 859 aa15.45■□□□□ 0.06
LITAF-203ENST00000413364 PSMA5P28066 241 aa15.45■□□□□ 0.06
LITAF-203ENST00000413364 EIF5P55010 431 aaKnown RBP15.45■□□□□ 0.06
LITAF-203ENST00000413364 CBX1P83916 185 aa15.45■□□□□ 0.06
LITAF-203ENST00000413364 MCMDC2Q4G0Z9 681 aa15.45■□□□□ 0.06
LITAF-203ENST00000413364 USPL1Q5W0Q7 1092 aa15.45■□□□□ 0.06
LITAF-203ENST00000413364 SAMD1Q6SPF0 538 aaPredicted RBP15.45■□□□□ 0.06
LITAF-203ENST00000413364 SYNE4Q8N205 404 aa15.45■□□□□ 0.06
LITAF-203ENST00000413364 ACSBG1Q96GR2 724 aa15.45■□□□□ 0.06
LITAF-203ENST00000413364 CCDC87Q9NVE4 849 aa15.45■□□□□ 0.06
LITAF-203ENST00000413364 GOLIM4O00461 696 aa15.44■□□□□ 0.06
LITAF-203ENST00000413364 CTSWP56202 376 aa15.44■□□□□ 0.06
LITAF-203ENST00000413364 IRX5P78411 483 aaPredicted RBP15.44■□□□□ 0.06
LITAF-203ENST00000413364 TSGA10IPQ3SY00 556 aa15.44■□□□□ 0.06
LITAF-203ENST00000413364 INTS5Q6P9B9 1019 aaKnown RBP15.44■□□□□ 0.06
LITAF-203ENST00000413364 ZNF34Q8IZ26 560 aa15.44■□□□□ 0.06
LITAF-203ENST00000413364 TTLL11Q8NHH1 800 aa15.44■□□□□ 0.06
LITAF-203ENST00000413364 TBC1D2BQ9UPU7 963 aa15.44■□□□□ 0.06
LITAF-203ENST00000413364 SH3TC1Q8TE82 1336 aa15.44■□□□□ 0.06
LITAF-203ENST00000413364 IRS4O14654 1257 aaPredicted RBP15.43■□□□□ 0.06
LITAF-203ENST00000413364 ZSCAN31Q96LW9 406 aaPredicted RBP15.43■□□□□ 0.06
LITAF-203ENST00000413364 CCDC85AQ96PX6 553 aaPredicted RBP15.43■□□□□ 0.06
LITAF-203ENST00000413364 TRMT112Q9UI30 125 aaKnown RBP15.43■□□□□ 0.06
LITAF-203ENST00000413364 NUP98P52948 1817 aa15.43■□□□□ 0.06
LITAF-203ENST00000413364 IFIT1P09914 478 aaKnown RBP15.43■□□□□ 0.06
LITAF-203ENST00000413364 SPEF2Q9C093 1822 aa15.43■□□□□ 0.06
LITAF-203ENST00000413364 LOC102724428A0A0B4J2F2 783 aa15.42■□□□□ 0.06
LITAF-203ENST00000413364 A0A0G2JS52 829 aa15.42■□□□□ 0.06
LITAF-203ENST00000413364 ATP6V1AP38606 617 aa15.42■□□□□ 0.06
LITAF-203ENST00000413364 CRKLP46109 303 aaKnown RBP15.42■□□□□ 0.06
LITAF-203ENST00000413364 SIK1P57059 783 aa15.42■□□□□ 0.06
LITAF-203ENST00000413364 KLHL40Q2TBA0 621 aa15.42■□□□□ 0.06
LITAF-203ENST00000413364 SH2B1Q9NRF2 756 aaPredicted RBP15.42■□□□□ 0.06
LITAF-203ENST00000413364 LMBRD1Q9NUN5 540 aa15.42■□□□□ 0.06
LITAF-203ENST00000413364 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.42■□□□□ 0.06
LITAF-203ENST00000413364 U3KPZ7 1027 aaPredicted RBP15.42■□□□□ 0.06
LITAF-203ENST00000413364 CICQ96RK0 1608 aaPredicted RBP15.42■□□□□ 0.06
LITAF-203ENST00000413364 UBN2Q6ZU65 1347 aa15.42■□□□□ 0.06
LITAF-203ENST00000413364 CCDC66A2RUB6 948 aa15.42■□□□□ 0.06
LITAF-203ENST00000413364 ITGA6P23229 1130 aa15.42■□□□□ 0.06
LITAF-203ENST00000413364 AXDND1Q5T1B0 1012 aaPredicted RBP15.42■□□□□ 0.06
LITAF-203ENST00000413364 LARP6Q9BRS8 491 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms