RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 TTC9Q92623 222 aa9.21□□□□□ -0.94
HDAC9-205ENST00000411993 TIMELESSQ9UNS1 1208 aa9.21□□□□□ -0.94
HDAC9-205ENST00000411993 RPLP1P05386 114 aaKnown RBP9.2□□□□□ -0.94
HDAC9-205ENST00000411993 GATA4P43694 442 aa9.2□□□□□ -0.94
HDAC9-205ENST00000411993 EIF1AXP47813 144 aaKnown RBP9.2□□□□□ -0.94
HDAC9-205ENST00000411993 MTMR3Q13615 1198 aa9.2□□□□□ -0.94
HDAC9-205ENST00000411993 GRIK5Q16478 980 aa9.2□□□□□ -0.94
HDAC9-205ENST00000411993 B4GALNT3Q6L9W6 998 aa9.2□□□□□ -0.94
HDAC9-205ENST00000411993 OR13H1Q8NG92 308 aa9.2□□□□□ -0.94
HDAC9-205ENST00000411993 ABI2Q9NYB9 513 aaPredicted RBP9.2□□□□□ -0.94
HDAC9-205ENST00000411993 ABL1P00519 1130 aa9.19□□□□□ -0.94
HDAC9-205ENST00000411993 HYAL2Q12891 473 aa9.19□□□□□ -0.94
HDAC9-205ENST00000411993 AAMPQ13685 434 aa9.19□□□□□ -0.94
HDAC9-205ENST00000411993 ALKBH2Q6NS38 261 aa9.19□□□□□ -0.94
HDAC9-205ENST00000411993 ZNF438Q7Z4V0 828 aa9.19□□□□□ -0.94
HDAC9-205ENST00000411993 FMR1NBQ8N0W7 255 aaPredicted RBP9.19□□□□□ -0.94
HDAC9-205ENST00000411993 SPACA7Q96KW9 195 aa9.19□□□□□ -0.94
HDAC9-205ENST00000411993 C8orf34Q49A92 452 aa9.18□□□□□ -0.94
HDAC9-205ENST00000411993 GDF6Q6KF10 455 aaPredicted RBP9.18□□□□□ -0.94
HDAC9-205ENST00000411993 PDE12Q6L8Q7 609 aaKnown RBP9.18□□□□□ -0.94
HDAC9-205ENST00000411993 PHLDB3Q6NSJ2 640 aa9.18□□□□□ -0.94
HDAC9-205ENST00000411993 C9orf172C9J069 976 aa9.17□□□□□ -0.94
HDAC9-205ENST00000411993 PDGFAP04085 211 aa9.17□□□□□ -0.94
HDAC9-205ENST00000411993 FURINP09958 794 aa9.17□□□□□ -0.94
HDAC9-205ENST00000411993 DTWD1Q8N5C7 304 aa9.17□□□□□ -0.94
HDAC9-205ENST00000411993 ELP3Q9H9T3 547 aa9.17□□□□□ -0.94
HDAC9-205ENST00000411993 K7ELQ4 463 aaPredicted RBP9.16□□□□□ -0.94
HDAC9-205ENST00000411993 FAM13AO94988 1023 aa9.16□□□□□ -0.94
HDAC9-205ENST00000411993 MZF1P28698 734 aaPredicted RBP9.16□□□□□ -0.94
HDAC9-205ENST00000411993 ZNF211Q13398 564 aaPredicted RBP9.16□□□□□ -0.94
HDAC9-205ENST00000411993 SF3B2Q13435 895 aaKnown RBP9.16□□□□□ -0.94
HDAC9-205ENST00000411993 DOC2BQ14184 412 aa9.16□□□□□ -0.94
HDAC9-205ENST00000411993 TMEM63CQ9P1W3 806 aa9.16□□□□□ -0.94
HDAC9-205ENST00000411993 USP21Q9UK80 565 aa9.16□□□□□ -0.94
HDAC9-205ENST00000411993 COL13A1Q5TAT6 717 aaPredicted RBP9.15□□□□□ -0.94
HDAC9-205ENST00000411993 SHISA2Q6UWI4 295 aa9.15□□□□□ -0.94
HDAC9-205ENST00000411993 IL22RA1Q8N6P7 574 aa9.15□□□□□ -0.94
HDAC9-205ENST00000411993 ANO2Q9NQ90 1003 aa9.15□□□□□ -0.94
HDAC9-205ENST00000411993 ADAM23O75077 832 aa9.14□□□□□ -0.95
HDAC9-205ENST00000411993 CYP2E1P05181 493 aaPredicted RBP9.14□□□□□ -0.95
HDAC9-205ENST00000411993 SELPP16109 830 aa9.14□□□□□ -0.95
HDAC9-205ENST00000411993 NRG1Q02297 640 aaPredicted RBP9.14□□□□□ -0.95
HDAC9-205ENST00000411993 NCAPG2Q86XI2 1143 aa9.14□□□□□ -0.95
HDAC9-205ENST00000411993 FBXO11Q86XK2 927 aa9.14□□□□□ -0.95
HDAC9-205ENST00000411993 POLIQ9UNA4 740 aa9.14□□□□□ -0.95
HDAC9-205ENST00000411993 TRIM33Q9UPN9 1127 aa9.14□□□□□ -0.95
HDAC9-205ENST00000411993 A6NHS1 94 aa9.13□□□□□ -0.95
HDAC9-205ENST00000411993 SMNDC1O75940 238 aaKnown RBP eCLIP9.13□□□□□ -0.95
HDAC9-205ENST00000411993 ATP11AP98196 1134 aa9.13□□□□□ -0.95
HDAC9-205ENST00000411993 FKBP4Q02790 459 aaKnown RBP eCLIP9.13□□□□□ -0.95
HDAC9-205ENST00000411993 CEP135Q66GS9 1140 aa9.13□□□□□ -0.95
HDAC9-205ENST00000411993 RETREG2Q8NC44 543 aa9.13□□□□□ -0.95
HDAC9-205ENST00000411993 LENG1Q96BZ8 264 aaPredicted RBP9.13□□□□□ -0.95
HDAC9-205ENST00000411993 GGNBP2Q9H3C7 697 aa9.13□□□□□ -0.95
HDAC9-205ENST00000411993 KANSL3Q9P2N6 904 aa9.13□□□□□ -0.95
HDAC9-205ENST00000411993 KIF4AO95239 1232 aa9.12□□□□□ -0.95
HDAC9-205ENST00000411993 NPR3P17342 541 aa9.12□□□□□ -0.95
HDAC9-205ENST00000411993 MBTPS1Q14703 1052 aa9.12□□□□□ -0.95
HDAC9-205ENST00000411993 ILDR2Q71H61 639 aa9.12□□□□□ -0.95
HDAC9-205ENST00000411993 CES1P23141 567 aa9.11□□□□□ -0.95
HDAC9-205ENST00000411993 PDE4CQ08493 712 aa9.11□□□□□ -0.95
HDAC9-205ENST00000411993 ADGRE1Q14246 886 aa9.11□□□□□ -0.95
HDAC9-205ENST00000411993 XKR5Q6UX68 686 aa9.11□□□□□ -0.95
HDAC9-205ENST00000411993 CACTIN-AS1Q8N1I8 211 aa9.11□□□□□ -0.95
HDAC9-205ENST00000411993 LACRTQ9GZZ8 138 aa9.11□□□□□ -0.95
HDAC9-205ENST00000411993 RASSF4Q9H2L5 321 aa9.11□□□□□ -0.95
HDAC9-205ENST00000411993 CNTN3Q9P232 1028 aa9.11□□□□□ -0.95
HDAC9-205ENST00000411993 FAM177BA6PVY3 158 aa9.1□□□□□ -0.95
HDAC9-205ENST00000411993 USP5P45974 858 aa9.1□□□□□ -0.95
HDAC9-205ENST00000411993 TXNRD3Q86VQ6 643 aa9.1□□□□□ -0.95
HDAC9-205ENST00000411993 C1orf127Q8N9H9 656 aa9.1□□□□□ -0.95
HDAC9-205ENST00000411993 MUC3BQ9H195 1237 aa9.1□□□□□ -0.95
HDAC9-205ENST00000411993 H3BRB1 525 aa9.09□□□□□ -0.95
HDAC9-205ENST00000411993 DEAF1O75398 565 aaPredicted RBP9.09□□□□□ -0.95
HDAC9-205ENST00000411993 EHHADHQ08426 723 aa9.09□□□□□ -0.95
HDAC9-205ENST00000411993 GLYCTKQ8IVS8 523 aa9.09□□□□□ -0.95
HDAC9-205ENST00000411993 DCAF11Q8TEB1 546 aa9.09□□□□□ -0.95
HDAC9-205ENST00000411993 TUT1Q9H6E5 874 aaKnown RBP9.09□□□□□ -0.95
HDAC9-205ENST00000411993 SRA1Q9HD15 236 aaKnown RBP9.09□□□□□ -0.95
HDAC9-205ENST00000411993 TPSG1Q9NRR2 321 aa9.09□□□□□ -0.95
HDAC9-205ENST00000411993 EGFL7Q9UHF1 273 aa9.09□□□□□ -0.95
HDAC9-205ENST00000411993 PPME1Q9Y570 386 aa9.09□□□□□ -0.95
HDAC9-205ENST00000411993 FZD6O60353 706 aa9.08□□□□□ -0.96
HDAC9-205ENST00000411993 SERPINB4P48594 390 aa9.08□□□□□ -0.96
HDAC9-205ENST00000411993 IGF2-ASQ6U949 168 aa9.08□□□□□ -0.96
HDAC9-205ENST00000411993 MAP4K3Q8IVH8 894 aa9.08□□□□□ -0.96
HDAC9-205ENST00000411993 PMEPA1Q969W9 287 aa9.08□□□□□ -0.96
HDAC9-205ENST00000411993 PBX4Q9BYU1 374 aa9.08□□□□□ -0.96
HDAC9-205ENST00000411993 ICMTO60725 284 aa9.07□□□□□ -0.96
HDAC9-205ENST00000411993 PHACTR2O75167 634 aa9.07□□□□□ -0.96
HDAC9-205ENST00000411993 CDC27P30260 824 aa9.07□□□□□ -0.96
HDAC9-205ENST00000411993 CEP120Q8N960 986 aa9.07□□□□□ -0.96
HDAC9-205ENST00000411993 SNX29Q8TEQ0 813 aa9.07□□□□□ -0.96
HDAC9-205ENST00000411993 SEMA6BQ9H3T3 888 aa9.07□□□□□ -0.96
HDAC9-205ENST00000411993 CCDC87Q9NVE4 849 aa9.07□□□□□ -0.96
HDAC9-205ENST00000411993 DLL1O00548 723 aa9.06□□□□□ -0.96
HDAC9-205ENST00000411993 PTPRAP18433 802 aa9.06□□□□□ -0.96
HDAC9-205ENST00000411993 CHRDQ9H2X0 955 aa9.06□□□□□ -0.96
HDAC9-205ENST00000411993 SALL4Q9UJQ4 1053 aa9.06□□□□□ -0.96
HDAC9-205ENST00000411993 LINC01387J3KSC0 135 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms