RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 SP8Q8IXZ3 490 aa23.02■■□□□ 1.28
CDC42-204ENST00000411827 TTLL6Q8N841 843 aa23.02■■□□□ 1.28
CDC42-204ENST00000411827 KLHDC4Q8TBB5 520 aa23.02■■□□□ 1.28
CDC42-204ENST00000411827 SIL1Q9H173 461 aa23.02■■□□□ 1.28
CDC42-204ENST00000411827 DPEP1P16444 411 aa23.01■■□□□ 1.27
CDC42-204ENST00000411827 NUCB1Q02818 461 aa23.01■■□□□ 1.27
CDC42-204ENST00000411827 CLASRPQ8N2M8 674 aaKnown RBP23.01■■□□□ 1.27
CDC42-204ENST00000411827 RHPN1Q8TCX5 695 aa23.01■■□□□ 1.27
CDC42-204ENST00000411827 ATP6V0A2Q9Y487 856 aa23.01■■□□□ 1.27
CDC42-204ENST00000411827 PPEF1O14829 653 aaPredicted RBP23■■□□□ 1.27
CDC42-204ENST00000411827 CHRNA5P30532 468 aa23■■□□□ 1.27
CDC42-204ENST00000411827 METTL24Q5JXM2 366 aa23■■□□□ 1.27
CDC42-204ENST00000411827 PDE8BO95263 885 aa22.99■■□□□ 1.27
CDC42-204ENST00000411827 LRRC24Q50LG9 513 aa22.99■■□□□ 1.27
CDC42-204ENST00000411827 MINPP1Q9UNW1 487 aa22.99■■□□□ 1.27
CDC42-204ENST00000411827 A0A0G2JLW4 131 aa22.98■■□□□ 1.27
CDC42-204ENST00000411827 SASH1O94885 1247 aa22.98■■□□□ 1.27
CDC42-204ENST00000411827 KCNA3P22001 575 aa22.98■■□□□ 1.27
CDC42-204ENST00000411827 ANKRD45Q5TZF3 282 aa22.98■■□□□ 1.27
CDC42-204ENST00000411827 PRPF40BQ6NWY9 871 aaKnown RBP22.98■■□□□ 1.27
CDC42-204ENST00000411827 PUS3Q9BZE2 481 aaKnown RBP22.98■■□□□ 1.27
CDC42-204ENST00000411827 DLEC1Q9Y238 1755 aa22.97■■□□□ 1.27
CDC42-204ENST00000411827 CHRNDQ07001 517 aa22.97■■□□□ 1.27
CDC42-204ENST00000411827 DALRD3Q5D0E6 543 aaKnown RBP22.97■■□□□ 1.27
CDC42-204ENST00000411827 CHD1LQ86WJ1 897 aa22.97■■□□□ 1.27
CDC42-204ENST00000411827 PODXL2Q9NZ53 605 aa22.97■■□□□ 1.27
CDC42-204ENST00000411827 LEMD3Q9Y2U8 911 aa22.97■■□□□ 1.27
CDC42-204ENST00000411827 XDHP47989 1333 aa22.97■■□□□ 1.27
CDC42-204ENST00000411827 UTRNP46939 3433 aa22.96■■□□□ 1.27
CDC42-204ENST00000411827 COL11A2P13942 1736 aaPredicted RBP22.96■■□□□ 1.27
CDC42-204ENST00000411827 UBE4AQ14139 1066 aa22.96■■□□□ 1.27
CDC42-204ENST00000411827 PUM3Q15397 648 aaKnown RBP22.96■■□□□ 1.27
CDC42-204ENST00000411827 KLHL34Q8N239 644 aa22.96■■□□□ 1.27
CDC42-204ENST00000411827 TFCP2Q12800 502 aa22.95■■□□□ 1.26
CDC42-204ENST00000411827 VGLL2Q8N8G2 317 aa22.95■■□□□ 1.26
CDC42-204ENST00000411827 FHDC1Q9C0D6 1143 aaPredicted RBP22.95■■□□□ 1.26
CDC42-204ENST00000411827 ATP2B4P23634 1241 aa22.94■■□□□ 1.26
CDC42-204ENST00000411827 RTKN2Q8IZC4 609 aa22.94■■□□□ 1.26
CDC42-204ENST00000411827 LPIN2Q92539 896 aa22.94■■□□□ 1.26
CDC42-204ENST00000411827 ANKIB1Q9P2G1 1089 aa22.94■■□□□ 1.26
CDC42-204ENST00000411827 IFIT1P09914 478 aaKnown RBP22.93■■□□□ 1.26
CDC42-204ENST00000411827 C7orf43Q8WVR3 580 aa22.93■■□□□ 1.26
CDC42-204ENST00000411827 APBB1O00213 710 aa22.92■■□□□ 1.26
CDC42-204ENST00000411827 IFIT2P09913 472 aaKnown RBP22.92■■□□□ 1.26
CDC42-204ENST00000411827 SLC5A1P13866 664 aa22.92■■□□□ 1.26
CDC42-204ENST00000411827 KCNJ4P48050 445 aa22.92■■□□□ 1.26
CDC42-204ENST00000411827 ATP2B3Q16720 1220 aa22.92■■□□□ 1.26
CDC42-204ENST00000411827 TNNI3KQ59H18 835 aa22.92■■□□□ 1.26
CDC42-204ENST00000411827 SUPT20HQ8NEM7 779 aa22.92■■□□□ 1.26
CDC42-204ENST00000411827 GPATCH3Q96I76 525 aa22.92■■□□□ 1.26
CDC42-204ENST00000411827 SYT17Q9BSW7 474 aa22.92■■□□□ 1.26
CDC42-204ENST00000411827 FPGT-TNNI3KV9GXZ4 949 aa22.92■■□□□ 1.26
CDC42-204ENST00000411827 KIAA1551Q9HCM1 1747 aa22.91■■□□□ 1.26
CDC42-204ENST00000411827 CCDC93Q567U6 631 aa22.91■■□□□ 1.26
CDC42-204ENST00000411827 MPNDQ8N594 471 aa22.91■■□□□ 1.26
CDC42-204ENST00000411827 GGA1Q9UJY5 639 aa22.91■■□□□ 1.26
CDC42-204ENST00000411827 NSFL1CQ9UNZ2 370 aaKnown RBP22.91■■□□□ 1.26
CDC42-204ENST00000411827 LRRC37AA6NMS7 1700 aa22.91■■□□□ 1.26
CDC42-204ENST00000411827 FGFR2P21802 821 aa22.9■■□□□ 1.26
CDC42-204ENST00000411827 C15orf52Q6ZUT6 534 aaKnown RBP22.9■■□□□ 1.26
CDC42-204ENST00000411827 VPS33BQ9H267 617 aa22.9■■□□□ 1.26
CDC42-204ENST00000411827 IL1RAPL2Q9NP60 686 aa22.9■■□□□ 1.26
CDC42-204ENST00000411827 ZNF804BA4D1E1 1349 aa22.89■■□□□ 1.26
CDC42-204ENST00000411827 A0A1B0GUL7 405 aa22.89■■□□□ 1.25
CDC42-204ENST00000411827 DPP8Q6V1X1 898 aaPredicted RBP22.89■■□□□ 1.25
CDC42-204ENST00000411827 AACSQ86V21 672 aa22.89■■□□□ 1.25
CDC42-204ENST00000411827 EYA3Q99504 573 aa22.89■■□□□ 1.25
CDC42-204ENST00000411827 LNPKQ9C0E8 428 aa22.89■■□□□ 1.25
CDC42-204ENST00000411827 ZBTB22O15209 634 aa22.88■■□□□ 1.25
CDC42-204ENST00000411827 EAF2Q96CJ1 260 aaPredicted RBP22.88■■□□□ 1.25
CDC42-204ENST00000411827 RTFDC1Q9BY42 306 aaPredicted RBP22.88■■□□□ 1.25
CDC42-204ENST00000411827 ZNF609O15014 1411 aa22.88■■□□□ 1.25
CDC42-204ENST00000411827 TAF1P21675 1872 aa22.88■■□□□ 1.25
CDC42-204ENST00000411827 TAF5LO75529 589 aa22.87■■□□□ 1.25
CDC42-204ENST00000411827 GPSM2P81274 684 aa22.87■■□□□ 1.25
CDC42-204ENST00000411827 CAVIN4Q5BKX8 364 aa22.87■■□□□ 1.25
CDC42-204ENST00000411827 HELBQ8NG08 1087 aaPredicted RBP22.87■■□□□ 1.25
CDC42-204ENST00000411827 PSMD1Q99460 953 aa22.87■■□□□ 1.25
CDC42-204ENST00000411827 SLX4Q8IY92 1834 aa22.87■■□□□ 1.25
CDC42-204ENST00000411827 AOX1Q06278 1338 aa22.86■■□□□ 1.25
CDC42-204ENST00000411827 TTC41PQ6P2S7 1318 aa22.86■■□□□ 1.25
CDC42-204ENST00000411827 SMARCA5O60264 1052 aaPredicted RBP22.86■■□□□ 1.25
CDC42-204ENST00000411827 CCDC158Q5M9N0 1113 aa22.86■■□□□ 1.25
CDC42-204ENST00000411827 GORABQ5T7V8 394 aa22.86■■□□□ 1.25
CDC42-204ENST00000411827 NLGN2Q8NFZ4 835 aa22.86■■□□□ 1.25
CDC42-204ENST00000411827 NEUROD6Q96NK8 337 aa22.86■■□□□ 1.25
CDC42-204ENST00000411827 STAP2Q9UGK3 403 aa22.86■■□□□ 1.25
CDC42-204ENST00000411827 SPEF2Q9C093 1822 aa22.86■■□□□ 1.25
CDC42-204ENST00000411827 COL4A1P02462 1669 aa22.85■■□□□ 1.25
CDC42-204ENST00000411827 ERC2O15083 957 aa22.85■■□□□ 1.25
CDC42-204ENST00000411827 C21orf2O43822 256 aa22.85■■□□□ 1.25
CDC42-204ENST00000411827 UFL1O94874 794 aa22.85■■□□□ 1.25
CDC42-204ENST00000411827 TIMM10P62072 90 aa22.85■■□□□ 1.25
CDC42-204ENST00000411827 TBC1D16Q8TBP0 767 aa22.85■■□□□ 1.25
CDC42-204ENST00000411827 ZNF512BQ96KM6 892 aaPredicted RBP22.85■■□□□ 1.25
CDC42-204ENST00000411827 OSBPL3Q9H4L5 887 aa22.85■■□□□ 1.25
CDC42-204ENST00000411827 GNL3LQ9NVN8 582 aaKnown RBP22.85■■□□□ 1.25
CDC42-204ENST00000411827 BCS1LQ9Y276 419 aa22.85■■□□□ 1.25
CDC42-204ENST00000411827 BRCA1P38398 1863 aaKnown RBP22.85■■□□□ 1.25
CDC42-204ENST00000411827 C6orf229H3BNL8 230 aa22.84■■□□□ 1.25
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