RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 EFCC1Q9HA90 598 aa3.64□□□□□ -1.83
RNU2-55P-201ENST00000411146 FRRS1LQ9P0K9 344 aa3.64□□□□□ -1.83
RNU2-55P-201ENST00000411146 A6NJR5 290 aa3.63□□□□□ -1.83
RNU2-55P-201ENST00000411146 DDX3YO15523 660 aaKnown RBP3.63□□□□□ -1.83
RNU2-55P-201ENST00000411146 EGFRP00533 1210 aa3.63□□□□□ -1.83
RNU2-55P-201ENST00000411146 SSTR4P31391 388 aa3.63□□□□□ -1.83
RNU2-55P-201ENST00000411146 NRLP54845 237 aa3.63□□□□□ -1.83
RNU2-55P-201ENST00000411146 SRPK2P78362 688 aaKnown RBP3.63□□□□□ -1.83
RNU2-55P-201ENST00000411146 ATP11AP98196 1134 aa3.63□□□□□ -1.83
RNU2-55P-201ENST00000411146 IGF2-ASQ6U949 168 aa3.63□□□□□ -1.83
RNU2-55P-201ENST00000411146 PRR23CQ6ZRP0 262 aa3.63□□□□□ -1.83
RNU2-55P-201ENST00000411146 DZIP1LQ8IYY4 767 aaKnown RBP3.63□□□□□ -1.83
RNU2-55P-201ENST00000411146 FAM200AQ8TCP9 573 aa3.63□□□□□ -1.83
RNU2-55P-201ENST00000411146 STK32AQ8WU08 396 aa3.63□□□□□ -1.83
RNU2-55P-201ENST00000411146 TTC9Q92623 222 aa3.63□□□□□ -1.83
RNU2-55P-201ENST00000411146 COL26A1Q96A83 441 aa3.63□□□□□ -1.83
RNU2-55P-201ENST00000411146 MKNK1Q9BUB5 465 aa3.63□□□□□ -1.83
RNU2-55P-201ENST00000411146 F8W735 103 aaPredicted RBP3.62□□□□□ -1.83
RNU2-55P-201ENST00000411146 LINC01387J3KSC0 135 aa3.62□□□□□ -1.83
RNU2-55P-201ENST00000411146 FOXO3O43524 673 aa3.62□□□□□ -1.83
RNU2-55P-201ENST00000411146 TRPA1O75762 1119 aa3.62□□□□□ -1.83
RNU2-55P-201ENST00000411146 ACPPP15309 386 aa3.62□□□□□ -1.83
RNU2-55P-201ENST00000411146 HIF1AQ16665 826 aa3.62□□□□□ -1.83
RNU2-55P-201ENST00000411146 HGSNATQ68CP4 663 aa3.62□□□□□ -1.83
RNU2-55P-201ENST00000411146 DTWD1Q8N5C7 304 aa3.62□□□□□ -1.83
RNU2-55P-201ENST00000411146 LACRTQ9GZZ8 138 aa3.62□□□□□ -1.83
RNU2-55P-201ENST00000411146 AKTIPQ9H8T0 292 aa3.62□□□□□ -1.83
RNU2-55P-201ENST00000411146 SH2B1Q9NRF2 756 aaPredicted RBP3.62□□□□□ -1.83
RNU2-55P-201ENST00000411146 RNF112Q9ULX5 631 aa3.62□□□□□ -1.83
RNU2-55P-201ENST00000411146 NOVA2Q9UNW9 492 aaKnown RBP3.62□□□□□ -1.83
RNU2-55P-201ENST00000411146 KRTAP4-8A0A0G2JLE6 195 aa3.61□□□□□ -1.83
RNU2-55P-201ENST00000411146 EPB42P16452 691 aa3.61□□□□□ -1.83
RNU2-55P-201ENST00000411146 VTI1AQ96AJ9 217 aa3.61□□□□□ -1.83
RNU2-55P-201ENST00000411146 CARD10Q9BWT7 1032 aa3.61□□□□□ -1.83
RNU2-55P-201ENST00000411146 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.6□□□□□ -1.83
RNU2-55P-201ENST00000411146 PSAPP07602 524 aa3.6□□□□□ -1.83
RNU2-55P-201ENST00000411146 FSTP19883 344 aa3.6□□□□□ -1.83
RNU2-55P-201ENST00000411146 ATCAYQ86WG3 371 aa3.6□□□□□ -1.83
RNU2-55P-201ENST00000411146 ARMC10Q8N2F6 343 aa3.6□□□□□ -1.83
RNU2-55P-201ENST00000411146 TMEM130Q8N3G9 435 aa3.6□□□□□ -1.83
RNU2-55P-201ENST00000411146 GPR152Q8TDT2 470 aa3.6□□□□□ -1.83
RNU2-55P-201ENST00000411146 RASSF4Q9H2L5 321 aa3.6□□□□□ -1.83
RNU2-55P-201ENST00000411146 GOLGA2P5Q9HBQ8 144 aa3.6□□□□□ -1.83
RNU2-55P-201ENST00000411146 CNTN3Q9P232 1028 aa3.6□□□□□ -1.83
RNU2-55P-201ENST00000411146 SEPT3Q9UH03 358 aa3.6□□□□□ -1.83
RNU2-55P-201ENST00000411146 A6NHS1 94 aa3.59□□□□□ -1.83
RNU2-55P-201ENST00000411146 UBAP1LF5GYI3 381 aa3.59□□□□□ -1.83
RNU2-55P-201ENST00000411146 ADAM11O75078 769 aa3.59□□□□□ -1.83
RNU2-55P-201ENST00000411146 TGFB1P01137 390 aa3.59□□□□□ -1.83
RNU2-55P-201ENST00000411146 GHRHP01286 108 aa3.59□□□□□ -1.83
RNU2-55P-201ENST00000411146 PCSK7Q16549 785 aa3.59□□□□□ -1.83
RNU2-55P-201ENST00000411146 TMEM132AQ24JP5 1023 aa3.59□□□□□ -1.83
RNU2-55P-201ENST00000411146 TMEM164Q5U3C3 297 aa3.59□□□□□ -1.83
RNU2-55P-201ENST00000411146 CEP135Q66GS9 1140 aa3.59□□□□□ -1.83
RNU2-55P-201ENST00000411146 MCTP1Q6DN14 999 aa3.59□□□□□ -1.83
RNU2-55P-201ENST00000411146 KIAA1211Q6ZU35 1233 aa3.59□□□□□ -1.83
RNU2-55P-201ENST00000411146 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.59□□□□□ -1.83
RNU2-55P-201ENST00000411146 NLRP13Q86W25 1043 aa3.59□□□□□ -1.83
RNU2-55P-201ENST00000411146 SHISA5Q8N114 240 aa3.59□□□□□ -1.83
RNU2-55P-201ENST00000411146 OR13H1Q8NG92 308 aa3.59□□□□□ -1.83
RNU2-55P-201ENST00000411146 KLHDC7BQ96G42 594 aa3.59□□□□□ -1.83
RNU2-55P-201ENST00000411146 HHIPQ96QV1 700 aa3.59□□□□□ -1.83
RNU2-55P-201ENST00000411146 POP1Q99575 1024 aaKnown RBP3.59□□□□□ -1.83
RNU2-55P-201ENST00000411146 HMX2A2RU54 273 aa3.58□□□□□ -1.84
RNU2-55P-201ENST00000411146 HOXD8P13378 290 aaPredicted RBP3.58□□□□□ -1.84
RNU2-55P-201ENST00000411146 GLB1P16278 677 aa3.58□□□□□ -1.84
RNU2-55P-201ENST00000411146 EPHA1P21709 976 aa3.58□□□□□ -1.84
RNU2-55P-201ENST00000411146 ZAP70P43403 619 aa3.58□□□□□ -1.84
RNU2-55P-201ENST00000411146 C16orf46Q6P387 395 aa3.58□□□□□ -1.84
RNU2-55P-201ENST00000411146 Q6ZS46 218 aa3.58□□□□□ -1.84
RNU2-55P-201ENST00000411146 UBASH3BQ8TF42 649 aa3.58□□□□□ -1.84
RNU2-55P-201ENST00000411146 FOXD4L4Q8WXT5 416 aaPredicted RBP3.58□□□□□ -1.84
RNU2-55P-201ENST00000411146 MRPL18Q9H0U6 180 aaKnown RBP3.58□□□□□ -1.84
RNU2-55P-201ENST00000411146 GGNBP2Q9H3C7 697 aa3.58□□□□□ -1.84
RNU2-55P-201ENST00000411146 C11orf16Q9NQ32 467 aa3.58□□□□□ -1.84
RNU2-55P-201ENST00000411146 CXXC1Q9P0U4 656 aaPredicted RBP3.58□□□□□ -1.84
RNU2-55P-201ENST00000411146 TMEM63CQ9P1W3 806 aa3.58□□□□□ -1.84
RNU2-55P-201ENST00000411146 KANSL3Q9P2N6 904 aa3.58□□□□□ -1.84
RNU2-55P-201ENST00000411146 PPME1Q9Y570 386 aa3.58□□□□□ -1.84
RNU2-55P-201ENST00000411146 ACIN1Q9UKV3 1341 aaKnown RBP3.58□□□□□ -1.84
RNU2-55P-201ENST00000411146 COL17A1Q9UMD9 1497 aaPredicted RBP3.58□□□□□ -1.84
RNU2-55P-201ENST00000411146 ARID1BQ8NFD5 2236 aaPredicted RBP3.58□□□□□ -1.84
RNU2-55P-201ENST00000411146 BTBD11A6QL63 1104 aa3.57□□□□□ -1.84
RNU2-55P-201ENST00000411146 NFKBIEO00221 500 aa3.57□□□□□ -1.84
RNU2-55P-201ENST00000411146 BRD2P25440 801 aaKnown RBP3.57□□□□□ -1.84
RNU2-55P-201ENST00000411146 SOX18P35713 384 aa3.57□□□□□ -1.84
RNU2-55P-201ENST00000411146 CD97P48960 835 aa3.57□□□□□ -1.84
RNU2-55P-201ENST00000411146 SLC51AQ86UW1 340 aa3.57□□□□□ -1.84
RNU2-55P-201ENST00000411146 TRIM42Q8IWZ5 723 aa3.57□□□□□ -1.84
RNU2-55P-201ENST00000411146 CEP120Q8N960 986 aa3.57□□□□□ -1.84
RNU2-55P-201ENST00000411146 PCMTD2Q9NV79 361 aa3.57□□□□□ -1.84
RNU2-55P-201ENST00000411146 RAXQ9Y2V3 346 aa3.57□□□□□ -1.84
RNU2-55P-201ENST00000411146 OAS3Q9Y6K5 1087 aaKnown RBP3.57□□□□□ -1.84
RNU2-55P-201ENST00000411146 PRR19A6NJB7 356 aa3.56□□□□□ -1.84
RNU2-55P-201ENST00000411146 FSCN2O14926 492 aa3.56□□□□□ -1.84
RNU2-55P-201ENST00000411146 CD68P34810 354 aaPredicted RBP3.56□□□□□ -1.84
RNU2-55P-201ENST00000411146 ACAD11Q709F0 780 aa3.56□□□□□ -1.84
RNU2-55P-201ENST00000411146 ZDHHC13Q8IUH4 622 aa3.56□□□□□ -1.84
RNU2-55P-201ENST00000411146 C1orf127Q8N9H9 656 aa3.56□□□□□ -1.84
RNU2-55P-201ENST00000411146 CARNS1A5YM72 827 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms