RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 NPR3P17342 541 aa7.15□□□□□ -1.26
LSM5-205ENST00000409952 KANK3Q6NY19 840 aa7.15□□□□□ -1.26
LSM5-205ENST00000409952 TREML1Q86YW5 311 aa7.15□□□□□ -1.26
LSM5-205ENST00000409952 BEND7Q8N7W2 519 aaPredicted RBP7.15□□□□□ -1.26
LSM5-205ENST00000409952 ARMC5Q96C12 935 aa7.15□□□□□ -1.26
LSM5-205ENST00000409952 KRTAP4-8Q9BYQ9 185 aa7.15□□□□□ -1.26
LSM5-205ENST00000409952 TGIF2Q9GZN2 237 aa7.15□□□□□ -1.26
LSM5-205ENST00000409952 CCSER2Q9H7U1 834 aa7.15□□□□□ -1.26
LSM5-205ENST00000409952 CWC22Q9HCG8 908 aaKnown RBP7.15□□□□□ -1.26
LSM5-205ENST00000409952 MRS2Q9HD23 443 aa7.15□□□□□ -1.26
LSM5-205ENST00000409952 NLRP2Q9NX02 1062 aa7.15□□□□□ -1.26
LSM5-205ENST00000409952 PRKAG2Q9UGJ0 569 aa7.15□□□□□ -1.26
LSM5-205ENST00000409952 NDUFB5O43674 189 aa7.14□□□□□ -1.27
LSM5-205ENST00000409952 PRPF40AO75400 957 aaKnown RBP7.14□□□□□ -1.27
LSM5-205ENST00000409952 MAP3K6O95382 1288 aa7.14□□□□□ -1.27
LSM5-205ENST00000409952 EPB42P16452 691 aa7.14□□□□□ -1.27
LSM5-205ENST00000409952 BRD2P25440 801 aaKnown RBP7.14□□□□□ -1.27
LSM5-205ENST00000409952 CCINQ13939 588 aa7.14□□□□□ -1.27
LSM5-205ENST00000409952 CHSY3Q70JA7 882 aa7.14□□□□□ -1.27
LSM5-205ENST00000409952 POLR3GLQ9BT43 218 aa7.14□□□□□ -1.27
LSM5-205ENST00000409952 STARD13Q9Y3M8 1113 aa7.14□□□□□ -1.27
LSM5-205ENST00000409952 LDHBP07195 334 aaKnown RBP7.13□□□□□ -1.27
LSM5-205ENST00000409952 ATP2B1P20020 1258 aa7.13□□□□□ -1.27
LSM5-205ENST00000409952 FANCCQ00597 558 aa7.13□□□□□ -1.27
LSM5-205ENST00000409952 NEUROD1Q13562 356 aa7.13□□□□□ -1.27
LSM5-205ENST00000409952 NAA30Q147X3 362 aaPredicted RBP7.13□□□□□ -1.27
LSM5-205ENST00000409952 RNF34Q969K3 372 aa7.13□□□□□ -1.27
LSM5-205ENST00000409952 PRDM6Q9NQX0 595 aa7.13□□□□□ -1.27
LSM5-205ENST00000409952 STIM2Q9P246 746 aa7.13□□□□□ -1.27
LSM5-205ENST00000409952 PARP2Q9UGN5 583 aa7.13□□□□□ -1.27
LSM5-205ENST00000409952 RTCBQ9Y3I0 505 aaKnown RBP7.13□□□□□ -1.27
LSM5-205ENST00000409952 KCNMB2Q9Y691 235 aa7.13□□□□□ -1.27
LSM5-205ENST00000409952 PHF20L1A8MW92 1017 aa7.12□□□□□ -1.27
LSM5-205ENST00000409952 COL9A3Q14050 684 aaPredicted RBP7.12□□□□□ -1.27
LSM5-205ENST00000409952 C20orf204Q6ZNR8 217 aa7.12□□□□□ -1.27
LSM5-205ENST00000409952 TMC4Q7Z404 712 aa7.12□□□□□ -1.27
LSM5-205ENST00000409952 RAB44Q7Z6P3 723 aaPredicted RBP7.12□□□□□ -1.27
LSM5-205ENST00000409952 DHX38Q92620 1227 aaKnown RBP7.12□□□□□ -1.27
LSM5-205ENST00000409952 CITED4Q96RK1 184 aa7.12□□□□□ -1.27
LSM5-205ENST00000409952 CAPN10Q9HC96 672 aa7.12□□□□□ -1.27
LSM5-205ENST00000409952 ZFATQ9P243 1243 aa7.12□□□□□ -1.27
LSM5-205ENST00000409952 MKL2Q9ULH7 1088 aa7.12□□□□□ -1.27
LSM5-205ENST00000409952 ZBTB39O15060 712 aa7.11□□□□□ -1.27
LSM5-205ENST00000409952 SORBS3O60504 671 aa7.11□□□□□ -1.27
LSM5-205ENST00000409952 IGHA1P01876 353 aa7.11□□□□□ -1.27
LSM5-205ENST00000409952 GNL2Q13823 731 aaKnown RBP7.11□□□□□ -1.27
LSM5-205ENST00000409952 DSC3Q14574 896 aa7.11□□□□□ -1.27
LSM5-205ENST00000409952 GPAT2Q6NUI2 795 aa7.11□□□□□ -1.27
LSM5-205ENST00000409952 ZNF662Q6ZS27 426 aa7.11□□□□□ -1.27
LSM5-205ENST00000409952 BHMTQ93088 406 aa7.11□□□□□ -1.27
LSM5-205ENST00000409952 FAM161BQ96MY7 647 aa7.11□□□□□ -1.27
LSM5-205ENST00000409952 DUSP9Q99956 384 aaKnown RBP7.11□□□□□ -1.27
LSM5-205ENST00000409952 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.11□□□□□ -1.27
LSM5-205ENST00000409952 TLDC2A0PJX2 215 aa7.1□□□□□ -1.27
LSM5-205ENST00000409952 HOXD8P13378 290 aaPredicted RBP7.1□□□□□ -1.27
LSM5-205ENST00000409952 GTF2F1P35269 517 aaKnown RBP eCLIP7.1□□□□□ -1.27
LSM5-205ENST00000409952 ZNF76P36508 570 aa7.1□□□□□ -1.27
LSM5-205ENST00000409952 ADH7P40394 386 aa7.1□□□□□ -1.27
LSM5-205ENST00000409952 DAB2P98082 770 aa7.1□□□□□ -1.27
LSM5-205ENST00000409952 PLCB3Q01970 1234 aa7.1□□□□□ -1.27
LSM5-205ENST00000409952 PSMD2Q13200 908 aa7.1□□□□□ -1.27
LSM5-205ENST00000409952 ILDR2Q71H61 639 aa7.1□□□□□ -1.27
LSM5-205ENST00000409952 PODNQ7Z5L7 613 aa7.1□□□□□ -1.27
LSM5-205ENST00000409952 TMC1Q8TDI8 760 aa7.1□□□□□ -1.27
LSM5-205ENST00000409952 DMRTB1Q96MA1 342 aa7.1□□□□□ -1.27
LSM5-205ENST00000409952 VTI1BQ9UEU0 232 aa7.1□□□□□ -1.27
LSM5-205ENST00000409952 NFKB1P19838 968 aa7.09□□□□□ -1.27
LSM5-205ENST00000409952 ALAS2P22557 587 aa7.09□□□□□ -1.27
LSM5-205ENST00000409952 MPSTP25325 297 aa7.09□□□□□ -1.27
LSM5-205ENST00000409952 MAPK8P45983 427 aa7.09□□□□□ -1.27
LSM5-205ENST00000409952 CCDC144BQ3MJ40 725 aa7.09□□□□□ -1.27
LSM5-205ENST00000409952 ALYREFQ86V81 257 aaKnown RBP7.09□□□□□ -1.27
LSM5-205ENST00000409952 ABTB2Q8N961 1025 aa7.09□□□□□ -1.27
LSM5-205ENST00000409952 TRPM4Q8TD43 1214 aa7.09□□□□□ -1.27
LSM5-205ENST00000409952 GMLQ99445 158 aa7.09□□□□□ -1.27
LSM5-205ENST00000409952 GNB5O14775 395 aa7.08□□□□□ -1.28
LSM5-205ENST00000409952 XYLBO75191 536 aa7.08□□□□□ -1.28
LSM5-205ENST00000409952 AMPD1P23109 780 aa7.08□□□□□ -1.28
LSM5-205ENST00000409952 TARSP26639 723 aaKnown RBP7.08□□□□□ -1.28
LSM5-205ENST00000409952 COL8A1P27658 744 aa7.08□□□□□ -1.28
LSM5-205ENST00000409952 ZAP70P43403 619 aa7.08□□□□□ -1.28
LSM5-205ENST00000409952 ATP2B2Q01814 1243 aa7.08□□□□□ -1.28
LSM5-205ENST00000409952 EHHADHQ08426 723 aa7.08□□□□□ -1.28
LSM5-205ENST00000409952 TRIP4Q15650 581 aaPredicted RBP7.08□□□□□ -1.28
LSM5-205ENST00000409952 MICALL1Q8N3F8 863 aa7.08□□□□□ -1.28
LSM5-205ENST00000409952 DCAF5Q96JK2 942 aa7.08□□□□□ -1.28
LSM5-205ENST00000409952 ACBD3Q9H3P7 528 aa7.08□□□□□ -1.28
LSM5-205ENST00000409952 SLC6A14Q9UN76 642 aa7.08□□□□□ -1.28
LSM5-205ENST00000409952 USP20Q9Y2K6 914 aa7.08□□□□□ -1.28
LSM5-205ENST00000409952 ZBTB42B2RXF5 422 aa7.07□□□□□ -1.28
LSM5-205ENST00000409952 TRIM11Q96F44 468 aa7.07□□□□□ -1.28
LSM5-205ENST00000409952 SUV39H2Q9H5I1 410 aa7.07□□□□□ -1.28
LSM5-205ENST00000409952 RRAGCQ9HB90 399 aa7.07□□□□□ -1.28
LSM5-205ENST00000409952 DNAJB12Q9NXW2 375 aaKnown RBP7.07□□□□□ -1.28
LSM5-205ENST00000409952 FAM13BQ9NYF5 915 aa7.07□□□□□ -1.28
LSM5-205ENST00000409952 NAGPAQ9UK23 515 aa7.07□□□□□ -1.28
LSM5-205ENST00000409952 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.07□□□□□ -1.28
LSM5-205ENST00000409952 PIK3R2O00459 728 aa7.06□□□□□ -1.28
LSM5-205ENST00000409952 SASH3O75995 380 aa7.06□□□□□ -1.28
LSM5-205ENST00000409952 ALBP02768 609 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms