RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 NKX1-1Q15270 411 aaPredicted RBP3.91□□□□□ -1.78
RGPD3-202ENST00000409886 ERCC4Q92889 916 aaPredicted RBP3.91□□□□□ -1.78
RGPD3-202ENST00000409886 UBR2Q8IWV8 1755 aa3.91□□□□□ -1.78
RGPD3-202ENST00000409886 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.91□□□□□ -1.78
RGPD3-202ENST00000409886 DAXXQ9UER7 740 aaPredicted RBP3.91□□□□□ -1.78
RGPD3-202ENST00000409886 A0A1B0GUL6 1792 aa3.91□□□□□ -1.78
RGPD3-202ENST00000409886 BAG4O95429 457 aaKnown RBP3.91□□□□□ -1.78
RGPD3-202ENST00000409886 CNTROBQ8N137 903 aa3.91□□□□□ -1.78
RGPD3-202ENST00000409886 RGS20O76081 388 aa3.9□□□□□ -1.78
RGPD3-202ENST00000409886 COL9A1P20849 921 aa3.9□□□□□ -1.78
RGPD3-202ENST00000409886 CAVIN1Q6NZI2 390 aaKnown RBP3.9□□□□□ -1.78
RGPD3-202ENST00000409886 PAXIP1Q6ZW49 1069 aaPredicted RBP3.9□□□□□ -1.78
RGPD3-202ENST00000409886 TMEM57Q8N5G2 664 aa3.9□□□□□ -1.78
RGPD3-202ENST00000409886 CCDC102AQ96A19 550 aa3.9□□□□□ -1.78
RGPD3-202ENST00000409886 C22orf23Q9BZE7 217 aa3.9□□□□□ -1.78
RGPD3-202ENST00000409886 CELSR1Q9NYQ6 3014 aa3.9□□□□□ -1.78
RGPD3-202ENST00000409886 BMP8BP34820 402 aa3.9□□□□□ -1.78
RGPD3-202ENST00000409886 GYS2P54840 703 aa3.9□□□□□ -1.78
RGPD3-202ENST00000409886 RAB3GAP1Q15042 981 aa3.9□□□□□ -1.78
RGPD3-202ENST00000409886 ABT1Q9ULW3 272 aaKnown RBP3.9□□□□□ -1.78
RGPD3-202ENST00000409886 EXOC6BQ9Y2D4 811 aa3.9□□□□□ -1.78
RGPD3-202ENST00000409886 KALRNO60229 2985 aa3.9□□□□□ -1.79
RGPD3-202ENST00000409886 NFKBIEO00221 500 aa3.9□□□□□ -1.79
RGPD3-202ENST00000409886 TMEM132EQ6IEE7 984 aa3.9□□□□□ -1.79
RGPD3-202ENST00000409886 ARMC5Q96C12 935 aa3.9□□□□□ -1.79
RGPD3-202ENST00000409886 VPS33BQ9H267 617 aa3.9□□□□□ -1.79
RGPD3-202ENST00000409886 COLQQ9Y215 455 aaPredicted RBP3.9□□□□□ -1.79
RGPD3-202ENST00000409886 AXIN2Q9Y2T1 843 aa3.9□□□□□ -1.79
RGPD3-202ENST00000409886 SYCE3A1L190 88 aa3.9□□□□□ -1.79
RGPD3-202ENST00000409886 USP27XA6NNY8 438 aa3.9□□□□□ -1.79
RGPD3-202ENST00000409886 PPFIA3O75145 1194 aa3.9□□□□□ -1.79
RGPD3-202ENST00000409886 SLFN14P0C7P3 912 aa3.9□□□□□ -1.79
RGPD3-202ENST00000409886 CSB-PGBD3P0DP91 1061 aa3.9□□□□□ -1.79
RGPD3-202ENST00000409886 EPHX2P34913 555 aa3.9□□□□□ -1.79
RGPD3-202ENST00000409886 RASSF7Q02833 373 aa3.9□□□□□ -1.79
RGPD3-202ENST00000409886 UPF3BQ9BZI7 483 aaKnown RBP3.9□□□□□ -1.79
RGPD3-202ENST00000409886 BCL2L12Q9HB09 334 aa3.9□□□□□ -1.79
RGPD3-202ENST00000409886 CSMD3Q7Z407 3707 aa3.9□□□□□ -1.79
RGPD3-202ENST00000409886 RIC1Q4ADV7 1423 aa3.9□□□□□ -1.79
RGPD3-202ENST00000409886 GOLGA2Q08379 1002 aa3.89□□□□□ -1.79
RGPD3-202ENST00000409886 DCTN1Q14203 1278 aa3.89□□□□□ -1.79
RGPD3-202ENST00000409886 STYK1Q6J9G0 422 aa3.89□□□□□ -1.79
RGPD3-202ENST00000409886 SMC5Q8IY18 1101 aa3.89□□□□□ -1.79
RGPD3-202ENST00000409886 KCNH6Q9H252 994 aa3.89□□□□□ -1.79
RGPD3-202ENST00000409886 ZNF219Q9P2Y4 722 aaPredicted RBP3.89□□□□□ -1.79
RGPD3-202ENST00000409886 NAP1L2Q9ULW6 460 aaPredicted RBP3.89□□□□□ -1.79
RGPD3-202ENST00000409886 RGL2O15211 777 aa3.89□□□□□ -1.79
RGPD3-202ENST00000409886 CALD1Q05682 793 aaKnown RBP3.89□□□□□ -1.79
RGPD3-202ENST00000409886 TBC1D9Q6ZT07 1266 aa3.89□□□□□ -1.79
RGPD3-202ENST00000409886 TTLL6Q8N841 843 aa3.89□□□□□ -1.79
RGPD3-202ENST00000409886 ZBTB40Q9NUA8 1239 aa3.89□□□□□ -1.79
RGPD3-202ENST00000409886 LARGE1O95461 756 aa3.89□□□□□ -1.79
RGPD3-202ENST00000409886 PDE4CQ08493 712 aa3.89□□□□□ -1.79
RGPD3-202ENST00000409886 NKX2-3Q8TAU0 364 aa3.89□□□□□ -1.79
RGPD3-202ENST00000409886 ZC3H15Q8WU90 426 aaKnown RBP3.89□□□□□ -1.79
RGPD3-202ENST00000409886 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.89□□□□□ -1.79
RGPD3-202ENST00000409886 PPP4R3BQ5MIZ7 849 aa3.89□□□□□ -1.79
RGPD3-202ENST00000409886 GPC2Q8N158 579 aa3.89□□□□□ -1.79
RGPD3-202ENST00000409886 TMX1Q9H3N1 280 aa3.89□□□□□ -1.79
RGPD3-202ENST00000409886 GOLGA6L3A6NEY3 463 aa3.89□□□□□ -1.79
RGPD3-202ENST00000409886 RPS6KA4O75676 772 aa3.89□□□□□ -1.79
RGPD3-202ENST00000409886 GYS1P13807 737 aa3.89□□□□□ -1.79
RGPD3-202ENST00000409886 ZCRB1Q8TBF4 217 aaKnown RBP3.89□□□□□ -1.79
RGPD3-202ENST00000409886 PSME4Q14997 1843 aa3.88□□□□□ -1.79
RGPD3-202ENST00000409886 ZNFX1Q9P2E3 1918 aaKnown RBP3.88□□□□□ -1.79
RGPD3-202ENST00000409886 SNED1Q8TER0 1413 aa3.88□□□□□ -1.79
RGPD3-202ENST00000409886 TRIM66O15016 1216 aa3.88□□□□□ -1.79
RGPD3-202ENST00000409886 TM4SF1P30408 202 aa3.88□□□□□ -1.79
RGPD3-202ENST00000409886 TRAPPC3LQ5T215 181 aa3.88□□□□□ -1.79
RGPD3-202ENST00000409886 FAM155AB1AL88 458 aaPredicted RBP3.88□□□□□ -1.79
RGPD3-202ENST00000409886 HSP90AA1P07900 732 aaKnown RBP3.88□□□□□ -1.79
RGPD3-202ENST00000409886 SAPCD2Q86UD0 394 aa3.88□□□□□ -1.79
RGPD3-202ENST00000409886 LINC00116Q8NCU8 138 aa3.88□□□□□ -1.79
RGPD3-202ENST00000409886 LRRC37AA6NMS7 1700 aa3.88□□□□□ -1.79
RGPD3-202ENST00000409886 UQCRHLA0A096LP55 91 aa3.88□□□□□ -1.79
RGPD3-202ENST00000409886 UQCRHP07919 91 aa3.88□□□□□ -1.79
RGPD3-202ENST00000409886 MTHFSP49914 203 aa3.88□□□□□ -1.79
RGPD3-202ENST00000409886 IRX5P78411 483 aaPredicted RBP3.88□□□□□ -1.79
RGPD3-202ENST00000409886 P2RX7Q99572 595 aaKnown RBP3.88□□□□□ -1.79
RGPD3-202ENST00000409886 CDK19Q9BWU1 502 aa3.88□□□□□ -1.79
RGPD3-202ENST00000409886 RNF186Q9NXI6 227 aa3.88□□□□□ -1.79
RGPD3-202ENST00000409886 EXOSC9Q06265 439 aaKnown RBP3.88□□□□□ -1.79
RGPD3-202ENST00000409886 ZSCAN23Q3MJ62 389 aa3.88□□□□□ -1.79
RGPD3-202ENST00000409886 FAM53CQ9NYF3 392 aa3.88□□□□□ -1.79
RGPD3-202ENST00000409886 USP42Q9H9J4 1324 aaKnown RBP3.88□□□□□ -1.79
RGPD3-202ENST00000409886 POLRMTO00411 1230 aaKnown RBP3.87□□□□□ -1.79
RGPD3-202ENST00000409886 A1BGP04217 495 aa3.87□□□□□ -1.79
RGPD3-202ENST00000409886 HCLS1P14317 486 aaPredicted RBP3.87□□□□□ -1.79
RGPD3-202ENST00000409886 RBM25P49756 843 aaKnown RBP3.87□□□□□ -1.79
RGPD3-202ENST00000409886 ZSCAN30Q86W11 494 aa3.87□□□□□ -1.79
RGPD3-202ENST00000409886 USP25Q9UHP3 1055 aa3.87□□□□□ -1.79
RGPD3-202ENST00000409886 NOL7Q9UMY1 257 aaKnown RBP3.87□□□□□ -1.79
RGPD3-202ENST00000409886 RTCBQ9Y3I0 505 aaKnown RBP3.87□□□□□ -1.79
RGPD3-202ENST00000409886 A0A0U1RQJ8 604 aa3.87□□□□□ -1.79
RGPD3-202ENST00000409886 NBPF7P0C2Y1 421 aaPredicted RBP3.87□□□□□ -1.79
RGPD3-202ENST00000409886 ATRIPQ8WXE1 791 aa3.87□□□□□ -1.79
RGPD3-202ENST00000409886 TAOK3Q9H2K8 898 aa3.87□□□□□ -1.79
RGPD3-202ENST00000409886 MYH14Q7Z406 1995 aaKnown RBP3.87□□□□□ -1.79
RGPD3-202ENST00000409886 TTC21BQ7Z4L5 1316 aa3.87□□□□□ -1.79
RGPD3-202ENST00000409886 SLX4Q8IY92 1834 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms