RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 ITGA6P23229 1130 aa17.34■□□□□ 0.37
MINDY4-202ENST00000409881 IFIT5Q13325 482 aaKnown RBP17.34■□□□□ 0.37
MINDY4-202ENST00000409881 APBB1O00213 710 aa17.33■□□□□ 0.37
MINDY4-202ENST00000409881 CD2BP2O95400 341 aaKnown RBP17.33■□□□□ 0.37
MINDY4-202ENST00000409881 PPP1R9BQ96SB3 815 aa17.33■□□□□ 0.37
MINDY4-202ENST00000409881 SIL1Q9H173 461 aa17.33■□□□□ 0.37
MINDY4-202ENST00000409881 NRXN2Q9P2S2 1712 aa17.33■□□□□ 0.37
MINDY4-202ENST00000409881 RFX5P48382 616 aaPredicted RBP17.33■□□□□ 0.36
MINDY4-202ENST00000409881 TAF7LQ5H9L4 462 aa17.33■□□□□ 0.36
MINDY4-202ENST00000409881 ZNF594Q96JF6 807 aaPredicted RBP17.33■□□□□ 0.36
MINDY4-202ENST00000409881 DCTPP1Q9H773 170 aa17.33■□□□□ 0.36
MINDY4-202ENST00000409881 ANKRD18BA2A2Z9 1011 aa17.32■□□□□ 0.36
MINDY4-202ENST00000409881 OFD1O75665 1012 aa17.32■□□□□ 0.36
MINDY4-202ENST00000409881 SF3B3Q15393 1217 aaKnown RBP17.32■□□□□ 0.36
MINDY4-202ENST00000409881 POLD1P28340 1107 aa17.32■□□□□ 0.36
MINDY4-202ENST00000409881 OS9Q13438 667 aaPredicted RBP17.32■□□□□ 0.36
MINDY4-202ENST00000409881 GCC1Q96CN9 775 aa17.32■□□□□ 0.36
MINDY4-202ENST00000409881 SEC31BQ9NQW1 1179 aa17.32■□□□□ 0.36
MINDY4-202ENST00000409881 RIC1Q4ADV7 1423 aa17.32■□□□□ 0.36
MINDY4-202ENST00000409881 PTPN12Q05209 780 aaKnown RBP17.31■□□□□ 0.36
MINDY4-202ENST00000409881 LNPKQ9C0E8 428 aa17.31■□□□□ 0.36
MINDY4-202ENST00000409881 MSNP26038 577 aaKnown RBP17.31■□□□□ 0.36
MINDY4-202ENST00000409881 BRIP1Q9BX63 1249 aa17.31■□□□□ 0.36
MINDY4-202ENST00000409881 COPRSQ9NQ92 184 aa17.31■□□□□ 0.36
MINDY4-202ENST00000409881 ANP32BQ92688 251 aaKnown RBP17.3■□□□□ 0.36
MINDY4-202ENST00000409881 KIF2CQ99661 725 aa17.3■□□□□ 0.36
MINDY4-202ENST00000409881 RTL9Q8NET4 1388 aa17.3■□□□□ 0.36
MINDY4-202ENST00000409881 PTMSP20962 102 aa17.29■□□□□ 0.36
MINDY4-202ENST00000409881 G3BP1Q13283 466 aaKnown RBP eCLIP17.29■□□□□ 0.36
MINDY4-202ENST00000409881 RPGRQ92834 1020 aaKnown RBP17.29■□□□□ 0.36
MINDY4-202ENST00000409881 ANKRD45Q5TZF3 282 aa17.29■□□□□ 0.36
MINDY4-202ENST00000409881 DDX46Q7L014 1031 aaKnown RBP17.29■□□□□ 0.36
MINDY4-202ENST00000409881 DDX49Q9Y6V7 483 aaKnown RBP17.29■□□□□ 0.36
MINDY4-202ENST00000409881 ANKRD31Q8N7Z5 1873 aa17.28■□□□□ 0.36
MINDY4-202ENST00000409881 PDE6BP35913 854 aa17.28■□□□□ 0.36
MINDY4-202ENST00000409881 HSP90AB4PQ58FF6 505 aa17.28■□□□□ 0.36
MINDY4-202ENST00000409881 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.28■□□□□ 0.36
MINDY4-202ENST00000409881 CDC5LQ99459 802 aaKnown RBP17.28■□□□□ 0.36
MINDY4-202ENST00000409881 FAM13BQ9NYF5 915 aa17.28■□□□□ 0.36
MINDY4-202ENST00000409881 R3HCC1Q9Y3T6 440 aaKnown RBP17.28■□□□□ 0.36
MINDY4-202ENST00000409881 SOCS7O14512 581 aa17.27■□□□□ 0.36
MINDY4-202ENST00000409881 CRY2Q49AN0 593 aa17.27■□□□□ 0.36
MINDY4-202ENST00000409881 LRRC24Q50LG9 513 aa17.27■□□□□ 0.36
MINDY4-202ENST00000409881 PUS3Q9BZE2 481 aaKnown RBP17.27■□□□□ 0.36
MINDY4-202ENST00000409881 K7ELQ4 463 aaPredicted RBP17.27■□□□□ 0.35
MINDY4-202ENST00000409881 EYA2O00167 538 aa17.27■□□□□ 0.35
MINDY4-202ENST00000409881 SMARCA5O60264 1052 aaPredicted RBP17.27■□□□□ 0.35
MINDY4-202ENST00000409881 IGHMBP2P38935 993 aaKnown RBP17.27■□□□□ 0.35
MINDY4-202ENST00000409881 LDHAL6AQ6ZMR3 332 aa17.27■□□□□ 0.35
MINDY4-202ENST00000409881 CELF1Q92879 486 aaKnown RBP17.27■□□□□ 0.35
MINDY4-202ENST00000409881 MPHOSPH8Q99549 860 aa17.27■□□□□ 0.35
MINDY4-202ENST00000409881 CNNM1Q9NRU3 951 aa17.27■□□□□ 0.35
MINDY4-202ENST00000409881 GOLGA6L22H0YM25 854 aa17.26■□□□□ 0.35
MINDY4-202ENST00000409881 RAB11FIP3O75154 756 aa17.26■□□□□ 0.35
MINDY4-202ENST00000409881 NUCB1Q02818 461 aa17.26■□□□□ 0.35
MINDY4-202ENST00000409881 ANKRD18AQ8IVF6 992 aa17.26■□□□□ 0.35
MINDY4-202ENST00000409881 C10orf71Q711Q0 1435 aa17.26■□□□□ 0.35
MINDY4-202ENST00000409881 COL4A1P02462 1669 aa17.26■□□□□ 0.35
MINDY4-202ENST00000409881 KLRG2A4D1S0 409 aaPredicted RBP17.26■□□□□ 0.35
MINDY4-202ENST00000409881 RBM17Q96I25 401 aaKnown RBP17.26■□□□□ 0.35
MINDY4-202ENST00000409881 LRRCC1Q9C099 1032 aa17.26■□□□□ 0.35
MINDY4-202ENST00000409881 C2CD5Q86YS7 1000 aa17.25■□□□□ 0.35
MINDY4-202ENST00000409881 ERC1Q8IUD2 1116 aa17.25■□□□□ 0.35
MINDY4-202ENST00000409881 TAF1P21675 1872 aa17.25■□□□□ 0.35
MINDY4-202ENST00000409881 BAG4O95429 457 aaKnown RBP17.25■□□□□ 0.35
MINDY4-202ENST00000409881 PTGER2P43116 358 aa17.25■□□□□ 0.35
MINDY4-202ENST00000409881 KLHL40Q2TBA0 621 aa17.25■□□□□ 0.35
MINDY4-202ENST00000409881 ATG9AQ7Z3C6 839 aa17.25■□□□□ 0.35
MINDY4-202ENST00000409881 RHPN1Q8TCX5 695 aa17.25■□□□□ 0.35
MINDY4-202ENST00000409881 KIF1BPQ96EK5 621 aa17.25■□□□□ 0.35
MINDY4-202ENST00000409881 SGIP1Q9BQI5 828 aa17.25■□□□□ 0.35
MINDY4-202ENST00000409881 IL1RAPL2Q9NP60 686 aa17.25■□□□□ 0.35
MINDY4-202ENST00000409881 CIAO1O76071 339 aa17.24■□□□□ 0.35
MINDY4-202ENST00000409881 SRGNP10124 158 aa17.24■□□□□ 0.35
MINDY4-202ENST00000409881 IL15P40933 162 aaPredicted RBP17.24■□□□□ 0.35
MINDY4-202ENST00000409881 CHD1LQ86WJ1 897 aa17.24■□□□□ 0.35
MINDY4-202ENST00000409881 KLHL34Q8N239 644 aa17.24■□□□□ 0.35
MINDY4-202ENST00000409881 PPP1R1BQ9UD71 204 aaPredicted RBP17.24■□□□□ 0.35
MINDY4-202ENST00000409881 H0YIN7 160 aa17.24■□□□□ 0.35
MINDY4-202ENST00000409881 SASH1O94885 1247 aa17.24■□□□□ 0.35
MINDY4-202ENST00000409881 NCLP19338 710 aaKnown RBP17.24■□□□□ 0.35
MINDY4-202ENST00000409881 CHRNA5P30532 468 aa17.24■□□□□ 0.35
MINDY4-202ENST00000409881 RPS8P62241 208 aaKnown RBP17.24■□□□□ 0.35
MINDY4-202ENST00000409881 GRAPQ13588 217 aa17.24■□□□□ 0.35
MINDY4-202ENST00000409881 GRAPLQ8TC17 118 aaPredicted RBP17.24■□□□□ 0.35
MINDY4-202ENST00000409881 SPON1Q9HCB6 807 aa17.24■□□□□ 0.35
MINDY4-202ENST00000409881 SPEF2Q9C093 1822 aa17.24■□□□□ 0.35
MINDY4-202ENST00000409881 LRP5O75197 1615 aa17.23■□□□□ 0.35
MINDY4-202ENST00000409881 COL11A2P13942 1736 aaPredicted RBP17.23■□□□□ 0.35
MINDY4-202ENST00000409881 NPR1P16066 1061 aa17.23■□□□□ 0.35
MINDY4-202ENST00000409881 TFCP2Q12800 502 aa17.23■□□□□ 0.35
MINDY4-202ENST00000409881 FBXO3Q9UK99 471 aa17.23■□□□□ 0.35
MINDY4-202ENST00000409881 PRDM4Q9UKN5 801 aa17.23■□□□□ 0.35
MINDY4-202ENST00000409881 HOXA10P31260 410 aaPredicted RBP17.23■□□□□ 0.35
MINDY4-202ENST00000409881 ZNF622Q969S3 477 aaKnown RBP eCLIP17.23■□□□□ 0.35
MINDY4-202ENST00000409881 METTL24Q5JXM2 366 aa17.22■□□□□ 0.35
MINDY4-202ENST00000409881 MASTLQ96GX5 879 aa17.22■□□□□ 0.35
MINDY4-202ENST00000409881 ARID3AQ99856 593 aa17.22■□□□□ 0.35
MINDY4-202ENST00000409881 RIPOR2Q9Y4F9 1068 aa17.22■□□□□ 0.35
MINDY4-202ENST00000409881 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms