RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 SH2B1Q9NRF2 756 aaPredicted RBP24.09■■□□□ 1.45
USP39-204ENST00000409766 BRPF3Q9ULD4 1205 aa24.09■■□□□ 1.45
USP39-204ENST00000409766 UBN2Q6ZU65 1347 aa24.09■■□□□ 1.45
USP39-204ENST00000409766 CICQ96RK0 1608 aaPredicted RBP24.09■■□□□ 1.45
USP39-204ENST00000409766 RREB1Q92766 1687 aa24.09■■□□□ 1.45
USP39-204ENST00000409766 ITGA6P23229 1130 aa24.08■■□□□ 1.45
USP39-204ENST00000409766 COL9A3Q14050 684 aaPredicted RBP24.08■■□□□ 1.45
USP39-204ENST00000409766 CCDC87Q9NVE4 849 aa24.08■■□□□ 1.45
USP39-204ENST00000409766 RIPOR2Q9Y4F9 1068 aa24.08■■□□□ 1.45
USP39-204ENST00000409766 LOC102724428A0A0B4J2F2 783 aa24.08■■□□□ 1.44
USP39-204ENST00000409766 ATP6V1AP38606 617 aa24.08■■□□□ 1.44
USP39-204ENST00000409766 SIK1P57059 783 aa24.08■■□□□ 1.44
USP39-204ENST00000409766 XAGE2Q96GT9 111 aa24.08■■□□□ 1.44
USP39-204ENST00000409766 CHAMP1Q96JM3 812 aa24.08■■□□□ 1.44
USP39-204ENST00000409766 HELLSQ9NRZ9 838 aa24.08■■□□□ 1.44
USP39-204ENST00000409766 ISY1Q9ULR0 285 aaKnown RBP24.08■■□□□ 1.44
USP39-204ENST00000409766 RIC1Q4ADV7 1423 aa24.07■■□□□ 1.44
USP39-204ENST00000409766 WDR33Q9C0J8 1336 aaKnown RBP24.07■■□□□ 1.44
USP39-204ENST00000409766 CRKLP46109 303 aaKnown RBP24.07■■□□□ 1.44
USP39-204ENST00000409766 BLOC1S2Q6QNY1 142 aa24.07■■□□□ 1.44
USP39-204ENST00000409766 CERKQ8TCT0 537 aa24.07■■□□□ 1.44
USP39-204ENST00000409766 ALDH8A1Q9H2A2 487 aaPredicted RBP24.07■■□□□ 1.44
USP39-204ENST00000409766 U3KPZ7 1027 aaPredicted RBP24.07■■□□□ 1.44
USP39-204ENST00000409766 A0A0G2JS52 829 aa24.06■■□□□ 1.44
USP39-204ENST00000409766 PRPF40AO75400 957 aaKnown RBP24.06■■□□□ 1.44
USP39-204ENST00000409766 ADORA1P30542 326 aa24.06■■□□□ 1.44
USP39-204ENST00000409766 CCDC158Q5M9N0 1113 aa24.06■■□□□ 1.44
USP39-204ENST00000409766 PDE8AO60658 829 aa24.06■■□□□ 1.44
USP39-204ENST00000409766 RPS6KB1P23443 525 aa24.06■■□□□ 1.44
USP39-204ENST00000409766 ZMYM1Q5SVZ6 1142 aa24.06■■□□□ 1.44
USP39-204ENST00000409766 ANKRD18BA2A2Z9 1011 aa24.05■■□□□ 1.44
USP39-204ENST00000409766 XRCC6P12956 609 aaKnown RBP eCLIP24.05■■□□□ 1.44
USP39-204ENST00000409766 ME3Q16798 604 aa24.05■■□□□ 1.44
USP39-204ENST00000409766 LDHAL6AQ6ZMR3 332 aa24.05■■□□□ 1.44
USP39-204ENST00000409766 MYH14Q7Z406 1995 aaKnown RBP24.05■■□□□ 1.44
USP39-204ENST00000409766 ITPK1Q13572 414 aa24.05■■□□□ 1.44
USP39-204ENST00000409766 KRT32Q14532 448 aa24.05■■□□□ 1.44
USP39-204ENST00000409766 CCDC83Q8IWF9 413 aa24.05■■□□□ 1.44
USP39-204ENST00000409766 TPCN1Q9ULQ1 816 aa24.05■■□□□ 1.44
USP39-204ENST00000409766 SMC3Q9UQE7 1217 aa24.05■■□□□ 1.44
USP39-204ENST00000409766 SLFNL1Q499Z3 407 aa24.04■■□□□ 1.44
USP39-204ENST00000409766 GORABQ5T7V8 394 aa24.04■■□□□ 1.44
USP39-204ENST00000409766 ST3GAL1Q11201 340 aa24.03■■□□□ 1.44
USP39-204ENST00000409766 ANKRD1Q15327 319 aa24.03■■□□□ 1.44
USP39-204ENST00000409766 TTC39AQ5SRH9 613 aa24.03■■□□□ 1.44
USP39-204ENST00000409766 RNF113AO15541 343 aaKnown RBP24.03■■□□□ 1.44
USP39-204ENST00000409766 METTL24Q5JXM2 366 aa24.03■■□□□ 1.44
USP39-204ENST00000409766 CYP21A2P08686 494 aa24.02■■□□□ 1.44
USP39-204ENST00000409766 MRE11P49959 708 aa24.02■■□□□ 1.44
USP39-204ENST00000409766 ATP2B3Q16720 1220 aa24.02■■□□□ 1.44
USP39-204ENST00000409766 AK7Q96M32 723 aa24.02■■□□□ 1.44
USP39-204ENST00000409766 SYT1P21579 422 aa24.01■■□□□ 1.43
USP39-204ENST00000409766 FKBP4Q02790 459 aaKnown RBP eCLIP24.01■■□□□ 1.43
USP39-204ENST00000409766 VGLL2Q8N8G2 317 aa24.01■■□□□ 1.43
USP39-204ENST00000409766 DSCC1Q9BVC3 393 aa24.01■■□□□ 1.43
USP39-204ENST00000409766 TOB2Q14106 344 aaPredicted RBP24.01■■□□□ 1.43
USP39-204ENST00000409766 GAS2L3Q86XJ1 694 aa24.01■■□□□ 1.43
USP39-204ENST00000409766 GPT2Q8TD30 523 aa24.01■■□□□ 1.43
USP39-204ENST00000409766 TCEANC2Q96MN5 208 aa24.01■■□□□ 1.43
USP39-204ENST00000409766 CNNM1Q9NRU3 951 aa24.01■■□□□ 1.43
USP39-204ENST00000409766 ABCC12Q96J65 1359 aa24.01■■□□□ 1.43
USP39-204ENST00000409766 BCL9LQ86UU0 1499 aa24■■□□□ 1.43
USP39-204ENST00000409766 KCNQ2O43526 872 aa24■■□□□ 1.43
USP39-204ENST00000409766 STX6O43752 255 aa24■■□□□ 1.43
USP39-204ENST00000409766 CAMTA2O94983 1202 aa24■■□□□ 1.43
USP39-204ENST00000409766 SCARF1Q14162 830 aa24■■□□□ 1.43
USP39-204ENST00000409766 SUSD4Q5VX71 490 aa24■■□□□ 1.43
USP39-204ENST00000409766 C8orf37Q96NL8 207 aa24■■□□□ 1.43
USP39-204ENST00000409766 NEK1Q96PY6 1258 aa24■■□□□ 1.43
USP39-204ENST00000409766 MAST3O60307 1309 aa24■■□□□ 1.43
USP39-204ENST00000409766 ZSCAN22P10073 491 aaPredicted RBP24■■□□□ 1.43
USP39-204ENST00000409766 GJB2P29033 226 aa24■■□□□ 1.43
USP39-204ENST00000409766 SMARCC1Q92922 1105 aaPredicted RBP24■■□□□ 1.43
USP39-204ENST00000409766 GRPEL1Q9HAV7 217 aa24■■□□□ 1.43
USP39-204ENST00000409766 LRP5O75197 1615 aa23.99■■□□□ 1.43
USP39-204ENST00000409766 NECAB1Q8N987 351 aa23.99■■□□□ 1.43
USP39-204ENST00000409766 NGLY1Q96IV0 654 aa23.99■■□□□ 1.43
USP39-204ENST00000409766 COL5A3P25940 1745 aaPredicted RBP23.99■■□□□ 1.43
USP39-204ENST00000409766 AKAP11Q9UKA4 1901 aa23.98■■□□□ 1.43
USP39-204ENST00000409766 FAM98CQ17RN3 349 aaKnown RBP23.98■■□□□ 1.43
USP39-204ENST00000409766 TCHHQ07283 1943 aa23.98■■□□□ 1.43
USP39-204ENST00000409766 ZNF831Q5JPB2 1677 aa23.98■■□□□ 1.43
USP39-204ENST00000409766 HSPD1P10809 573 aaKnown RBP23.98■■□□□ 1.43
USP39-204ENST00000409766 NCLP19338 710 aaKnown RBP23.98■■□□□ 1.43
USP39-204ENST00000409766 LRRFIP1Q32MZ4 808 aaKnown RBP23.98■■□□□ 1.43
USP39-204ENST00000409766 CAVIN1Q6NZI2 390 aaKnown RBP23.98■■□□□ 1.43
USP39-204ENST00000409766 SPATA31A6Q5VVP1 1343 aa23.97■■□□□ 1.43
USP39-204ENST00000409766 PDE8BO95263 885 aa23.97■■□□□ 1.43
USP39-204ENST00000409766 ZAP70P43403 619 aa23.97■■□□□ 1.43
USP39-204ENST00000409766 ZNF512BQ96KM6 892 aaPredicted RBP23.97■■□□□ 1.43
USP39-204ENST00000409766 LAMA4Q16363 1823 aa23.97■■□□□ 1.43
USP39-204ENST00000409766 ZFYP08048 801 aaPredicted RBP23.96■■□□□ 1.43
USP39-204ENST00000409766 VPS72Q15906 364 aa23.96■■□□□ 1.43
USP39-204ENST00000409766 PARP10Q53GL7 1025 aa23.96■■□□□ 1.43
USP39-204ENST00000409766 FNBP4Q8N3X1 1017 aaPredicted RBP23.96■■□□□ 1.43
USP39-204ENST00000409766 OSBP2Q969R2 916 aa23.96■■□□□ 1.43
USP39-204ENST00000409766 UTP14AQ9BVJ6 771 aaKnown RBP23.96■■□□□ 1.43
USP39-204ENST00000409766 MYH7P12883 1935 aa23.96■■□□□ 1.43
USP39-204ENST00000409766 M0R2C6 588 aa23.96■■□□□ 1.43
USP39-204ENST00000409766 DDX60Q8IY21 1712 aaKnown RBP23.95■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms