RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 GGA1Q9UJY5 639 aa18.88■□□□□ 0.61
CBX3-203ENST00000409747 PSMD14O00487 310 aa18.88■□□□□ 0.61
CBX3-203ENST00000409747 UFL1O94874 794 aa18.88■□□□□ 0.61
CBX3-203ENST00000409747 PGAP2Q9UHJ9 254 aa18.88■□□□□ 0.61
CBX3-203ENST00000409747 NEURL1BA8MQ27 555 aa18.87■□□□□ 0.61
CBX3-203ENST00000409747 G3V3G9 751 aa18.87■□□□□ 0.61
CBX3-203ENST00000409747 DCAF8Q5TAQ9 597 aa18.87■□□□□ 0.61
CBX3-203ENST00000409747 MICALL2Q8IY33 904 aa18.87■□□□□ 0.61
CBX3-203ENST00000409747 TNS4Q8IZW8 715 aa18.87■□□□□ 0.61
CBX3-203ENST00000409747 JARID2Q92833 1246 aaPredicted RBP18.87■□□□□ 0.61
CBX3-203ENST00000409747 CCDC85AQ96PX6 553 aaPredicted RBP18.87■□□□□ 0.61
CBX3-203ENST00000409747 TRAF5O00463 557 aa18.86■□□□□ 0.61
CBX3-203ENST00000409747 FLIIQ13045 1269 aa18.86■□□□□ 0.61
CBX3-203ENST00000409747 XDHP47989 1333 aa18.86■□□□□ 0.61
CBX3-203ENST00000409747 ECE1P42892 770 aa18.86■□□□□ 0.61
CBX3-203ENST00000409747 DOK7Q18PE1 504 aa18.86■□□□□ 0.61
CBX3-203ENST00000409747 CWF19L2Q2TBE0 894 aaKnown RBP18.86■□□□□ 0.61
CBX3-203ENST00000409747 TRPM4Q8TD43 1214 aa18.86■□□□□ 0.61
CBX3-203ENST00000409747 ZBTB12Q9Y330 459 aaPredicted RBP18.86■□□□□ 0.61
CBX3-203ENST00000409747 WDR33Q9C0J8 1336 aaKnown RBP18.85■□□□□ 0.61
CBX3-203ENST00000409747 RTL9Q8NET4 1388 aa18.85■□□□□ 0.61
CBX3-203ENST00000409747 FKBP5Q13451 457 aaPredicted RBP18.85■□□□□ 0.61
CBX3-203ENST00000409747 G2E3Q7L622 706 aa18.85■□□□□ 0.61
CBX3-203ENST00000409747 MYH16Q9H6N6 1097 aa18.85■□□□□ 0.61
CBX3-203ENST00000409747 CDC37L1Q7L3B6 337 aa18.84■□□□□ 0.61
CBX3-203ENST00000409747 TTLL11Q8NHH1 800 aa18.84■□□□□ 0.61
CBX3-203ENST00000409747 GPR101Q96P66 508 aaPredicted RBP18.84■□□□□ 0.61
CBX3-203ENST00000409747 SALL2Q9Y467 1007 aaPredicted RBP18.84■□□□□ 0.61
CBX3-203ENST00000409747 THSD7BQ9C0I4 1608 aa18.84■□□□□ 0.61
CBX3-203ENST00000409747 ATP2B4P23634 1241 aa18.83■□□□□ 0.61
CBX3-203ENST00000409747 HIRAP54198 1017 aaPredicted RBP18.83■□□□□ 0.61
CBX3-203ENST00000409747 MAP2K1Q02750 393 aaPredicted RBP18.83■□□□□ 0.61
CBX3-203ENST00000409747 FMR1Q06787 632 aaKnown RBP eCLIP18.83■□□□□ 0.61
CBX3-203ENST00000409747 CST9Q5W186 159 aa18.83■□□□□ 0.61
CBX3-203ENST00000409747 PAXIP1Q6ZW49 1069 aaPredicted RBP18.83■□□□□ 0.61
CBX3-203ENST00000409747 UBE3BQ7Z3V4 1068 aa18.83■□□□□ 0.61
CBX3-203ENST00000409747 GLIS2Q9BZE0 524 aaPredicted RBP18.83■□□□□ 0.61
CBX3-203ENST00000409747 TLL2Q9Y6L7 1015 aa18.83■□□□□ 0.61
CBX3-203ENST00000409747 FOXN1O15353 648 aa18.83■□□□□ 0.6
CBX3-203ENST00000409747 CTCFP49711 727 aaPredicted RBP18.83■□□□□ 0.6
CBX3-203ENST00000409747 DNAAF4Q8WXU2 420 aa18.83■□□□□ 0.6
CBX3-203ENST00000409747 BSDC1Q9NW68 430 aaPredicted RBP18.83■□□□□ 0.6
CBX3-203ENST00000409747 SPEF2Q9C093 1822 aa18.82■□□□□ 0.6
CBX3-203ENST00000409747 ZNF609O15014 1411 aa18.82■□□□□ 0.6
CBX3-203ENST00000409747 H7C1W4 665 aa18.82■□□□□ 0.6
CBX3-203ENST00000409747 VAMP4O75379 141 aa18.82■□□□□ 0.6
CBX3-203ENST00000409747 CELF2O95319 508 aaKnown RBP18.82■□□□□ 0.6
CBX3-203ENST00000409747 GCKRQ14397 625 aa18.82■□□□□ 0.6
CBX3-203ENST00000409747 LINS1Q8NG48 757 aa18.82■□□□□ 0.6
CBX3-203ENST00000409747 CAPNS2Q96L46 248 aa18.82■□□□□ 0.6
CBX3-203ENST00000409747 GREM2Q9H772 168 aa18.82■□□□□ 0.6
CBX3-203ENST00000409747 WBP1LQ9NX94 342 aa18.82■□□□□ 0.6
CBX3-203ENST00000409747 PSME4Q14997 1843 aa18.81■□□□□ 0.6
CBX3-203ENST00000409747 SHTN1A0MZ66 631 aa18.81■□□□□ 0.6
CBX3-203ENST00000409747 VIL1P09327 827 aaKnown RBP18.81■□□□□ 0.6
CBX3-203ENST00000409747 EXOSC9Q06265 439 aaKnown RBP18.81■□□□□ 0.6
CBX3-203ENST00000409747 PLA2G12BQ9BX93 195 aa18.81■□□□□ 0.6
CBX3-203ENST00000409747 PRDM10Q9NQV6 1147 aa18.81■□□□□ 0.6
CBX3-203ENST00000409747 SCN9AQ15858 1988 aa18.81■□□□□ 0.6
CBX3-203ENST00000409747 IGHMBP2P38935 993 aaKnown RBP18.8■□□□□ 0.6
CBX3-203ENST00000409747 SAMD7Q7Z3H4 446 aa18.8■□□□□ 0.6
CBX3-203ENST00000409747 FAM9BQ8IZU0 186 aa18.8■□□□□ 0.6
CBX3-203ENST00000409747 KCNQ5Q9NR82 932 aa18.8■□□□□ 0.6
CBX3-203ENST00000409747 MED23Q9ULK4 1368 aa18.8■□□□□ 0.6
CBX3-203ENST00000409747 TBC1D10BQ4KMP7 808 aaPredicted RBP18.8■□□□□ 0.6
CBX3-203ENST00000409747 HHIPL1Q96JK4 782 aa18.8■□□□□ 0.6
CBX3-203ENST00000409747 KIF4BQ2VIQ3 1234 aa18.79■□□□□ 0.6
CBX3-203ENST00000409747 PODNQ7Z5L7 613 aa18.79■□□□□ 0.6
CBX3-203ENST00000409747 SAPCD2Q86UD0 394 aa18.79■□□□□ 0.6
CBX3-203ENST00000409747 AGBL3Q8NEM8 1001 aa18.79■□□□□ 0.6
CBX3-203ENST00000409747 ZNF408Q9H9D4 720 aa18.79■□□□□ 0.6
CBX3-203ENST00000409747 MINPP1Q9UNW1 487 aa18.79■□□□□ 0.6
CBX3-203ENST00000409747 CYP4F22Q6NT55 531 aa18.78■□□□□ 0.6
CBX3-203ENST00000409747 RSBN1LQ6PCB5 846 aaPredicted RBP18.78■□□□□ 0.6
CBX3-203ENST00000409747 DCPSQ96C86 337 aaKnown RBP18.78■□□□□ 0.6
CBX3-203ENST00000409747 GRM1Q13255 1194 aa18.77■□□□□ 0.6
CBX3-203ENST00000409747 KRT26Q7Z3Y9 468 aa18.77■□□□□ 0.6
CBX3-203ENST00000409747 BEGAINQ9BUH8 593 aa18.77■□□□□ 0.6
CBX3-203ENST00000409747 USP17L3A6NCW0 530 aa18.77■□□□□ 0.59
CBX3-203ENST00000409747 USP17L4A6NCW7 530 aa18.77■□□□□ 0.59
CBX3-203ENST00000409747 ITGA6P23229 1130 aa18.77■□□□□ 0.59
CBX3-203ENST00000409747 CCT4P50991 539 aaKnown RBP18.77■□□□□ 0.59
CBX3-203ENST00000409747 CASP7P55210 303 aa18.77■□□□□ 0.59
CBX3-203ENST00000409747 RBM26Q5T8P6 1007 aaKnown RBP18.77■□□□□ 0.59
CBX3-203ENST00000409747 USP17L1Q7RTZ2 530 aa18.77■□□□□ 0.59
CBX3-203ENST00000409747 USP48Q86UV5 1035 aa18.77■□□□□ 0.59
CBX3-203ENST00000409747 MPHOSPH8Q99549 860 aa18.77■□□□□ 0.59
CBX3-203ENST00000409747 MAP2K2P36507 400 aa18.76■□□□□ 0.59
CBX3-203ENST00000409747 ANKRD2Q9GZV1 360 aa18.76■□□□□ 0.59
CBX3-203ENST00000409747 LEMD3Q9Y2U8 911 aa18.76■□□□□ 0.59
CBX3-203ENST00000409747 EGFRP00533 1210 aa18.75■□□□□ 0.59
CBX3-203ENST00000409747 CSF1RP07333 972 aa18.75■□□□□ 0.59
CBX3-203ENST00000409747 ZNF280AP59817 542 aaPredicted RBP18.75■□□□□ 0.59
CBX3-203ENST00000409747 FAM161AQ3B820 660 aa18.75■□□□□ 0.59
CBX3-203ENST00000409747 SULF1Q8IWU6 871 aa18.74■□□□□ 0.59
CBX3-203ENST00000409747 SPINK5Q9NQ38 1064 aaPredicted RBP18.74■□□□□ 0.59
CBX3-203ENST00000409747 USP17L8P0C7I0 530 aa18.74■□□□□ 0.59
CBX3-203ENST00000409747 LBX1P52954 281 aa18.74■□□□□ 0.59
CBX3-203ENST00000409747 COA1Q9GZY4 146 aa18.74■□□□□ 0.59
CBX3-203ENST00000409747 GGA3Q9NZ52 723 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms