RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 ANKRD45Q5TZF3 282 aa18.84■□□□□ 0.61
AP1S3-204ENST00000409375 TTLL6Q8N841 843 aa18.84■□□□□ 0.61
AP1S3-204ENST00000409375 RHPN1Q8TCX5 695 aa18.84■□□□□ 0.61
AP1S3-204ENST00000409375 ANKRD2Q9GZV1 360 aa18.84■□□□□ 0.61
AP1S3-204ENST00000409375 AKAP2Q9Y2D5 859 aa18.84■□□□□ 0.61
AP1S3-204ENST00000409375 DPEP1P16444 411 aa18.83■□□□□ 0.6
AP1S3-204ENST00000409375 LRRC24Q50LG9 513 aa18.83■□□□□ 0.6
AP1S3-204ENST00000409375 ATG9AQ7Z3C6 839 aa18.83■□□□□ 0.6
AP1S3-204ENST00000409375 CLASRPQ8N2M8 674 aaKnown RBP18.83■□□□□ 0.6
AP1S3-204ENST00000409375 PUS3Q9BZE2 481 aaKnown RBP18.83■□□□□ 0.6
AP1S3-204ENST00000409375 PIM2Q9P1W9 311 aa18.83■□□□□ 0.6
AP1S3-204ENST00000409375 RIPOR2Q9Y4F9 1068 aa18.83■□□□□ 0.6
AP1S3-204ENST00000409375 TAF1P21675 1872 aa18.83■□□□□ 0.6
AP1S3-204ENST00000409375 A0A0G2JLW4 131 aa18.82■□□□□ 0.6
AP1S3-204ENST00000409375 CC2D2BQ6DHV5 1058 aa18.82■□□□□ 0.6
AP1S3-204ENST00000409375 SP8Q8IXZ3 490 aa18.82■□□□□ 0.6
AP1S3-204ENST00000409375 GPR108Q9NPR9 543 aa18.82■□□□□ 0.6
AP1S3-204ENST00000409375 NUCB1Q02818 461 aa18.81■□□□□ 0.6
AP1S3-204ENST00000409375 GRIPAP1Q4V328 841 aa18.81■□□□□ 0.6
AP1S3-204ENST00000409375 PRPF40BQ6NWY9 871 aaKnown RBP18.81■□□□□ 0.6
AP1S3-204ENST00000409375 CHD1LQ86WJ1 897 aa18.81■□□□□ 0.6
AP1S3-204ENST00000409375 ATP6V0A2Q9Y487 856 aa18.81■□□□□ 0.6
AP1S3-204ENST00000409375 CACNA1SQ13698 1873 aa18.81■□□□□ 0.6
AP1S3-204ENST00000409375 KIAA1551Q9HCM1 1747 aa18.8■□□□□ 0.6
AP1S3-204ENST00000409375 SASH1O94885 1247 aa18.8■□□□□ 0.6
AP1S3-204ENST00000409375 PDE8BO95263 885 aa18.8■□□□□ 0.6
AP1S3-204ENST00000409375 CHRNDQ07001 517 aa18.8■□□□□ 0.6
AP1S3-204ENST00000409375 TFCP2Q12800 502 aa18.8■□□□□ 0.6
AP1S3-204ENST00000409375 SOGA3Q5TF21 947 aa18.8■□□□□ 0.6
AP1S3-204ENST00000409375 MINPP1Q9UNW1 487 aa18.8■□□□□ 0.6
AP1S3-204ENST00000409375 XDHP47989 1333 aa18.79■□□□□ 0.6
AP1S3-204ENST00000409375 KCNJ4P48050 445 aa18.79■□□□□ 0.6
AP1S3-204ENST00000409375 DALRD3Q5D0E6 543 aaKnown RBP18.79■□□□□ 0.6
AP1S3-204ENST00000409375 ANKIB1Q9P2G1 1089 aa18.79■□□□□ 0.6
AP1S3-204ENST00000409375 LRRC37AA6NMS7 1700 aa18.79■□□□□ 0.6
AP1S3-204ENST00000409375 PUM3Q15397 648 aaKnown RBP18.78■□□□□ 0.6
AP1S3-204ENST00000409375 FHDC1Q9C0D6 1143 aaPredicted RBP18.78■□□□□ 0.6
AP1S3-204ENST00000409375 IL1RAPL2Q9NP60 686 aa18.78■□□□□ 0.6
AP1S3-204ENST00000409375 IFIT2P09913 472 aaKnown RBP18.77■□□□□ 0.6
AP1S3-204ENST00000409375 IFIT1P09914 478 aaKnown RBP18.77■□□□□ 0.6
AP1S3-204ENST00000409375 SLC5A1P13866 664 aa18.77■□□□□ 0.6
AP1S3-204ENST00000409375 KCNA3P22001 575 aa18.77■□□□□ 0.6
AP1S3-204ENST00000409375 UBE4AQ14139 1066 aa18.77■□□□□ 0.6
AP1S3-204ENST00000409375 ATP2B3Q16720 1220 aa18.77■□□□□ 0.6
AP1S3-204ENST00000409375 TNNI3KQ59H18 835 aa18.77■□□□□ 0.6
AP1S3-204ENST00000409375 GPATCH3Q96I76 525 aa18.77■□□□□ 0.6
AP1S3-204ENST00000409375 LNPKQ9C0E8 428 aa18.77■□□□□ 0.6
AP1S3-204ENST00000409375 LEMD3Q9Y2U8 911 aa18.77■□□□□ 0.6
AP1S3-204ENST00000409375 FPGT-TNNI3KV9GXZ4 949 aa18.77■□□□□ 0.6
AP1S3-204ENST00000409375 SLX4Q8IY92 1834 aa18.77■□□□□ 0.59
AP1S3-204ENST00000409375 COL4A1P02462 1669 aa18.76■□□□□ 0.59
AP1S3-204ENST00000409375 A0A1B0GUL6 1792 aa18.76■□□□□ 0.59
AP1S3-204ENST00000409375 BRCA1P38398 1863 aaKnown RBP18.76■□□□□ 0.59
AP1S3-204ENST00000409375 ATP2B4P23634 1241 aa18.76■□□□□ 0.59
AP1S3-204ENST00000409375 AACSQ86V21 672 aa18.76■□□□□ 0.59
AP1S3-204ENST00000409375 VGLL2Q8N8G2 317 aa18.76■□□□□ 0.59
AP1S3-204ENST00000409375 LPIN2Q92539 896 aa18.76■□□□□ 0.59
AP1S3-204ENST00000409375 BCL11AQ9H165 835 aa18.76■□□□□ 0.59
AP1S3-204ENST00000409375 PODXL2Q9NZ53 605 aa18.76■□□□□ 0.59
AP1S3-204ENST00000409375 NSFL1CQ9UNZ2 370 aaKnown RBP18.76■□□□□ 0.59
AP1S3-204ENST00000409375 ZNF609O15014 1411 aa18.75■□□□□ 0.59
AP1S3-204ENST00000409375 SMARCA5O60264 1052 aaPredicted RBP18.75■□□□□ 0.59
AP1S3-204ENST00000409375 CCDC93Q567U6 631 aa18.75■□□□□ 0.59
AP1S3-204ENST00000409375 MPNDQ8N594 471 aa18.75■□□□□ 0.59
AP1S3-204ENST00000409375 HELBQ8NG08 1087 aaPredicted RBP18.75■□□□□ 0.59
AP1S3-204ENST00000409375 NEUROD6Q96NK8 337 aa18.75■□□□□ 0.59
AP1S3-204ENST00000409375 SYT17Q9BSW7 474 aa18.75■□□□□ 0.59
AP1S3-204ENST00000409375 GGA1Q9UJY5 639 aa18.75■□□□□ 0.59
AP1S3-204ENST00000409375 A0A1B0GUL7 405 aa18.74■□□□□ 0.59
AP1S3-204ENST00000409375 TAF5LO75529 589 aa18.74■□□□□ 0.59
AP1S3-204ENST00000409375 GORABQ5T7V8 394 aa18.74■□□□□ 0.59
AP1S3-204ENST00000409375 DPP8Q6V1X1 898 aaPredicted RBP18.74■□□□□ 0.59
AP1S3-204ENST00000409375 RTKN2Q8IZC4 609 aa18.74■□□□□ 0.59
AP1S3-204ENST00000409375 ZNF804BA4D1E1 1349 aa18.74■□□□□ 0.59
AP1S3-204ENST00000409375 C21orf2O43822 256 aa18.73■□□□□ 0.59
AP1S3-204ENST00000409375 GPSM2P81274 684 aa18.73■□□□□ 0.59
AP1S3-204ENST00000409375 SUPT20HQ8NEM7 779 aa18.73■□□□□ 0.59
AP1S3-204ENST00000409375 NLGN2Q8NFZ4 835 aa18.73■□□□□ 0.59
AP1S3-204ENST00000409375 BCS1LQ9Y276 419 aa18.73■□□□□ 0.59
AP1S3-204ENST00000409375 UFL1O94874 794 aa18.72■□□□□ 0.59
AP1S3-204ENST00000409375 CAVIN4Q5BKX8 364 aa18.72■□□□□ 0.59
AP1S3-204ENST00000409375 C7orf43Q8WVR3 580 aa18.72■□□□□ 0.59
AP1S3-204ENST00000409375 EAF2Q96CJ1 260 aaPredicted RBP18.72■□□□□ 0.59
AP1S3-204ENST00000409375 EYA3Q99504 573 aa18.72■□□□□ 0.59
AP1S3-204ENST00000409375 ZNF219Q9P2Y4 722 aaPredicted RBP18.72■□□□□ 0.59
AP1S3-204ENST00000409375 C6orf229H3BNL8 230 aa18.71■□□□□ 0.59
AP1S3-204ENST00000409375 FGFR2P21802 821 aa18.71■□□□□ 0.59
AP1S3-204ENST00000409375 CCDC158Q5M9N0 1113 aa18.71■□□□□ 0.59
AP1S3-204ENST00000409375 ARFGEF1Q9Y6D6 1849 aa18.71■□□□□ 0.59
AP1S3-204ENST00000409375 ARAP2Q8WZ64 1704 aa18.71■□□□□ 0.59
AP1S3-204ENST00000409375 TTC41PQ6P2S7 1318 aa18.71■□□□□ 0.59
AP1S3-204ENST00000409375 ERC2O15083 957 aa18.7■□□□□ 0.58
AP1S3-204ENST00000409375 MX1P20591 662 aa18.7■□□□□ 0.58
AP1S3-204ENST00000409375 VPS37DQ86XT2 251 aa18.7■□□□□ 0.58
AP1S3-204ENST00000409375 CCDC8Q9H0W5 538 aaPredicted RBP18.7■□□□□ 0.58
AP1S3-204ENST00000409375 GNL3LQ9NVN8 582 aaKnown RBP18.7■□□□□ 0.58
AP1S3-204ENST00000409375 TIMM10P62072 90 aa18.69■□□□□ 0.58
AP1S3-204ENST00000409375 C15orf52Q6ZUT6 534 aaKnown RBP18.69■□□□□ 0.58
AP1S3-204ENST00000409375 ZNF804AQ7Z570 1209 aa18.69■□□□□ 0.58
AP1S3-204ENST00000409375 TBC1D16Q8TBP0 767 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms