RNA–Protein interactions for RNA: ENST00000407925.5

LTBP1-204, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-204ENST00000407925 SOS1Q07889 1333 aaPredicted RBP12.21□□□□□ -0.46
LTBP1-204ENST00000407925 GTF2F1P35269 517 aaKnown RBP eCLIP12.21□□□□□ -0.46
LTBP1-204ENST00000407925 KIF5AQ12840 1032 aa12.21□□□□□ -0.46
LTBP1-204ENST00000407925 CCDC6Q16204 474 aa12.21□□□□□ -0.46
LTBP1-204ENST00000407925 RFC4P35249 363 aa12.2□□□□□ -0.46
LTBP1-204ENST00000407925 TRIM75PA6NK02 468 aa12.2□□□□□ -0.46
LTBP1-204ENST00000407925 SLU7O95391 586 aaKnown RBP12.2□□□□□ -0.46
LTBP1-204ENST00000407925 MCMDC2Q4G0Z9 681 aa12.2□□□□□ -0.46
LTBP1-204ENST00000407925 CCDC110Q8TBZ0 833 aa12.2□□□□□ -0.46
LTBP1-204ENST00000407925 ANAPC4Q9UJX5 808 aa12.2□□□□□ -0.46
LTBP1-204ENST00000407925 STX8Q9UNK0 236 aa12.2□□□□□ -0.46
LTBP1-204ENST00000407925 CEP83Q9Y592 693 aa12.2□□□□□ -0.46
LTBP1-204ENST00000407925 EMILIN1Q9Y6C2 1016 aa12.2□□□□□ -0.46
LTBP1-204ENST00000407925 KRT79Q5XKE5 535 aa12.2□□□□□ -0.46
LTBP1-204ENST00000407925 TICAM2Q86XR7 235 aa12.2□□□□□ -0.46
LTBP1-204ENST00000407925 VAT1LQ9HCJ6 419 aa12.2□□□□□ -0.46
LTBP1-204ENST00000407925 CD109Q6YHK3 1445 aa12.2□□□□□ -0.46
LTBP1-204ENST00000407925 ATP2B3Q16720 1220 aa12.2□□□□□ -0.46
LTBP1-204ENST00000407925 WAPLQ7Z5K2 1190 aa12.2□□□□□ -0.46
LTBP1-204ENST00000407925 BRF1Q92994 677 aa12.2□□□□□ -0.46
LTBP1-204ENST00000407925 NGLY1Q96IV0 654 aa12.2□□□□□ -0.46
LTBP1-204ENST00000407925 PI4KAP2A4QPH2 592 aa12.19□□□□□ -0.46
LTBP1-204ENST00000407925 CCDC129Q6ZRS4 1044 aa12.19□□□□□ -0.46
LTBP1-204ENST00000407925 PI4KAP1Q8N8J0 262 aa12.19□□□□□ -0.46
LTBP1-204ENST00000407925 TTC41PQ6P2S7 1318 aa12.19□□□□□ -0.46
LTBP1-204ENST00000407925 SNAPC4Q5SXM2 1469 aa12.19□□□□□ -0.46
LTBP1-204ENST00000407925 CTAGE9A4FU28 777 aa12.19□□□□□ -0.46
LTBP1-204ENST00000407925 NDC80O14777 642 aa12.19□□□□□ -0.46
LTBP1-204ENST00000407925 NBPF6Q5VWK0 638 aa12.19□□□□□ -0.46
LTBP1-204ENST00000407925 DAAM2Q86T65 1068 aa12.19□□□□□ -0.46
LTBP1-204ENST00000407925 NBPF5PQ86XG9 351 aaPredicted RBP12.19□□□□□ -0.46
LTBP1-204ENST00000407925 OGFOD1Q8N543 542 aa12.19□□□□□ -0.46
LTBP1-204ENST00000407925 NBPF4Q96M43 638 aa12.19□□□□□ -0.46
LTBP1-204ENST00000407925 MTRF1LQ9UGC7 380 aaKnown RBP12.19□□□□□ -0.46
LTBP1-204ENST00000407925 GPTP24298 496 aa12.19□□□□□ -0.46
LTBP1-204ENST00000407925 GNA11P29992 359 aa12.19□□□□□ -0.46
LTBP1-204ENST00000407925 KRT28Q7Z3Y7 464 aa12.19□□□□□ -0.46
LTBP1-204ENST00000407925 NYXQ9GZU5 481 aa12.19□□□□□ -0.46
LTBP1-204ENST00000407925 RAD50Q92878 1312 aa12.19□□□□□ -0.46
LTBP1-204ENST00000407925 HS1BP3Q53T59 392 aa12.19□□□□□ -0.46
LTBP1-204ENST00000407925 BRAPQ7Z569 592 aa12.19□□□□□ -0.46
LTBP1-204ENST00000407925 TMX3Q96JJ7 454 aa12.19□□□□□ -0.46
LTBP1-204ENST00000407925 SKILP12757 684 aa12.18□□□□□ -0.46
LTBP1-204ENST00000407925 NUCB1Q02818 461 aa12.18□□□□□ -0.46
LTBP1-204ENST00000407925 ZNF804AQ7Z570 1209 aa12.18□□□□□ -0.46
LTBP1-204ENST00000407925 SMARCC2Q8TAQ2 1214 aa12.18□□□□□ -0.46
LTBP1-204ENST00000407925 TOPBP1Q92547 1522 aa12.18□□□□□ -0.46
LTBP1-204ENST00000407925 CYP7A1P22680 504 aa12.18□□□□□ -0.46
LTBP1-204ENST00000407925 ARID4AP29374 1257 aaPredicted RBP12.18□□□□□ -0.46
LTBP1-204ENST00000407925 ASIC1P78348 528 aa12.18□□□□□ -0.46
LTBP1-204ENST00000407925 GOLGA1Q92805 767 aa12.18□□□□□ -0.46
LTBP1-204ENST00000407925 NLRP3Q96P20 1036 aa12.18□□□□□ -0.46
LTBP1-204ENST00000407925 RPL13P26373 211 aaKnown RBP12.18□□□□□ -0.46
LTBP1-204ENST00000407925 SNX21Q969T3 373 aa12.18□□□□□ -0.46
LTBP1-204ENST00000407925 TIGD1Q96MW7 591 aa12.18□□□□□ -0.46
LTBP1-204ENST00000407925 MXRA7P84157 204 aa12.18□□□□□ -0.46
LTBP1-204ENST00000407925 NAA16Q6N069 864 aaPredicted RBP12.18□□□□□ -0.46
LTBP1-204ENST00000407925 DHX37Q8IY37 1157 aaKnown RBP12.18□□□□□ -0.46
LTBP1-204ENST00000407925 TUBB2AQ13885 445 aa12.17□□□□□ -0.46
LTBP1-204ENST00000407925 CCDC42Q96M95 316 aa12.17□□□□□ -0.46
LTBP1-204ENST00000407925 TUBB2BQ9BVA1 445 aa12.17□□□□□ -0.46
LTBP1-204ENST00000407925 MTUS1Q9ULD2 1270 aa12.17□□□□□ -0.46
LTBP1-204ENST00000407925 HMGB1P1B2RPK0 211 aaPredicted RBP12.17□□□□□ -0.46
LTBP1-204ENST00000407925 FOXO3O43524 673 aa12.17□□□□□ -0.46
LTBP1-204ENST00000407925 MAP7D1Q3KQU3 841 aa12.17□□□□□ -0.46
LTBP1-204ENST00000407925 ZSCAN23Q3MJ62 389 aa12.17□□□□□ -0.46
LTBP1-204ENST00000407925 TSGA10Q9BZW7 698 aa12.17□□□□□ -0.46
LTBP1-204ENST00000407925 CSRNP2Q9H175 543 aa12.17□□□□□ -0.46
LTBP1-204ENST00000407925 SLC4A4Q9Y6R1 1079 aa12.17□□□□□ -0.46
LTBP1-204ENST00000407925 SPDYE3A6NKU9 549 aa12.17□□□□□ -0.46
LTBP1-204ENST00000407925 NAPAP54920 295 aa12.17□□□□□ -0.46
LTBP1-204ENST00000407925 TNNC1P63316 161 aa12.17□□□□□ -0.46
LTBP1-204ENST00000407925 C14orf93Q9H972 538 aaKnown RBP12.17□□□□□ -0.46
LTBP1-204ENST00000407925 MBIPQ9NS73 344 aa12.17□□□□□ -0.46
LTBP1-204ENST00000407925 ADGRL1O94910 1474 aa12.17□□□□□ -0.46
LTBP1-204ENST00000407925 NPHP3Q7Z494 1330 aa12.17□□□□□ -0.46
LTBP1-204ENST00000407925 A6NNZ2 444 aa12.17□□□□□ -0.46
LTBP1-204ENST00000407925 HAND2P61296 217 aa12.17□□□□□ -0.46
LTBP1-204ENST00000407925 MRPS9P82933 396 aaKnown RBP12.17□□□□□ -0.46
LTBP1-204ENST00000407925 TUBB8Q3ZCM7 444 aa12.17□□□□□ -0.46
LTBP1-204ENST00000407925 ANKRD44Q8N8A2 993 aa12.17□□□□□ -0.46
LTBP1-204ENST00000407925 TXNDC16Q9P2K2 825 aa12.17□□□□□ -0.46
LTBP1-204ENST00000407925 STK24Q9Y6E0 443 aa12.17□□□□□ -0.46
LTBP1-204ENST00000407925 TOP2BQ02880 1626 aa12.17□□□□□ -0.46
LTBP1-204ENST00000407925 MNAT1P51948 309 aa12.16□□□□□ -0.46
LTBP1-204ENST00000407925 VAV2P52735 878 aa12.16□□□□□ -0.46
LTBP1-204ENST00000407925 USHBP1Q8N6Y0 703 aa12.16□□□□□ -0.46
LTBP1-204ENST00000407925 NEK11Q8NG66 645 aa12.16□□□□□ -0.46
LTBP1-204ENST00000407925 RRP36Q96EU6 259 aaKnown RBP12.16□□□□□ -0.46
LTBP1-204ENST00000407925 NAP1L3Q99457 506 aaPredicted RBP12.16□□□□□ -0.46
LTBP1-204ENST00000407925 PANK2Q9BZ23 570 aa12.16□□□□□ -0.46
LTBP1-204ENST00000407925 SNRKQ9NRH2 765 aa12.16□□□□□ -0.46
LTBP1-204ENST00000407925 CROCCP2Q86T23 111 aa12.16□□□□□ -0.46
LTBP1-204ENST00000407925 GABPB2Q8TAK5 448 aaPredicted RBP12.16□□□□□ -0.46
LTBP1-204ENST00000407925 ATP5DP30049 168 aa12.16□□□□□ -0.46
LTBP1-204ENST00000407925 MAP3K9P80192 1104 aa12.16□□□□□ -0.46
LTBP1-204ENST00000407925 ZBTB16Q05516 673 aa12.16□□□□□ -0.46
LTBP1-204ENST00000407925 VWA3BQ502W6 1294 aa12.16□□□□□ -0.46
LTBP1-204ENST00000407925 ESYT1Q9BSJ8 1104 aa12.16□□□□□ -0.46
LTBP1-204ENST00000407925 GLT8D2Q9H1C3 349 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms