RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-222ENST00000406454 MRPS27Q92552 414 aaKnown RBP15.29■□□□□ 0.04
CACNA1C-222ENST00000406454 PRC1O43663 620 aa15.29■□□□□ 0.04
CACNA1C-222ENST00000406454 RRP9O43818 475 aaKnown RBP15.29■□□□□ 0.04
CACNA1C-222ENST00000406454 ENOX2Q16206 610 aaKnown RBP15.29■□□□□ 0.04
CACNA1C-222ENST00000406454 IFIT1BQ5T764 474 aaKnown RBP15.29■□□□□ 0.04
CACNA1C-222ENST00000406454 RAD50Q92878 1312 aa15.29■□□□□ 0.04
CACNA1C-222ENST00000406454 TFCP2Q12800 502 aa15.29■□□□□ 0.04
CACNA1C-222ENST00000406454 FAM114A1Q8IWE2 563 aa15.29■□□□□ 0.04
CACNA1C-222ENST00000406454 SIRT1Q96EB6 747 aa15.29■□□□□ 0.04
CACNA1C-222ENST00000406454 IL13P35225 146 aa15.28■□□□□ 0.04
CACNA1C-222ENST00000406454 ZNF622Q969S3 477 aaKnown RBP eCLIP15.28■□□□□ 0.04
CACNA1C-222ENST00000406454 TSPY3P0CV98 308 aa15.28■□□□□ 0.04
CACNA1C-222ENST00000406454 TSPY8P0CW00 308 aa15.28■□□□□ 0.04
CACNA1C-222ENST00000406454 CHMLP26374 656 aa15.28■□□□□ 0.04
CACNA1C-222ENST00000406454 FEZ1Q99689 392 aa15.28■□□□□ 0.04
CACNA1C-222ENST00000406454 ADGRL2O95490 1459 aa15.28■□□□□ 0.04
CACNA1C-222ENST00000406454 LRRC27Q9C0I9 530 aa15.28■□□□□ 0.04
CACNA1C-222ENST00000406454 CCDC150Q8NCX0 1101 aa15.28■□□□□ 0.04
CACNA1C-222ENST00000406454 DDX21Q9NR30 783 aaKnown RBP eCLIP15.28■□□□□ 0.04
CACNA1C-222ENST00000406454 AK2P54819 239 aa15.27■□□□□ 0.04
CACNA1C-222ENST00000406454 DNMT1P26358 1616 aaKnown RBP15.27■□□□□ 0.04
CACNA1C-222ENST00000406454 CREB3L3Q68CJ9 461 aa15.27■□□□□ 0.04
CACNA1C-222ENST00000406454 IRS4O14654 1257 aaPredicted RBP15.27■□□□□ 0.03
CACNA1C-222ENST00000406454 ANKRD62A6NC57 917 aa15.27■□□□□ 0.03
CACNA1C-222ENST00000406454 SCLT1Q96NL6 688 aa15.27■□□□□ 0.03
CACNA1C-222ENST00000406454 DNM1Q05193 864 aaKnown RBP15.27■□□□□ 0.03
CACNA1C-222ENST00000406454 MAP9Q49MG5 647 aa15.27■□□□□ 0.03
CACNA1C-222ENST00000406454 G2E3Q7L622 706 aa15.27■□□□□ 0.03
CACNA1C-222ENST00000406454 RMND1Q9NWS8 449 aa15.27■□□□□ 0.03
CACNA1C-222ENST00000406454 PAFAH1B1P43034 410 aa15.26■□□□□ 0.03
CACNA1C-222ENST00000406454 BABAM1Q9NWV8 329 aa15.26■□□□□ 0.03
CACNA1C-222ENST00000406454 GOLGA6L9A6NEM1 432 aa15.26■□□□□ 0.03
CACNA1C-222ENST00000406454 DACT1Q9NYF0 836 aa15.26■□□□□ 0.03
CACNA1C-222ENST00000406454 DISP1Q96F81 1524 aa15.26■□□□□ 0.03
CACNA1C-222ENST00000406454 GNAQP50148 359 aa15.26■□□□□ 0.03
CACNA1C-222ENST00000406454 PCDH11XQ9BZA7 1347 aa15.26■□□□□ 0.03
CACNA1C-222ENST00000406454 PCDH11YQ9BZA8 1340 aa15.26■□□□□ 0.03
CACNA1C-222ENST00000406454 EDC4Q6P2E9 1401 aaKnown RBP15.26■□□□□ 0.03
CACNA1C-222ENST00000406454 UNC13AQ9UPW8 1703 aa15.26■□□□□ 0.03
CACNA1C-222ENST00000406454 FAM200AQ8TCP9 573 aa15.26■□□□□ 0.03
CACNA1C-222ENST00000406454 ZRSR2Q15696 482 aaKnown RBP15.26■□□□□ 0.03
CACNA1C-222ENST00000406454 MCM3P25205 808 aa15.26■□□□□ 0.03
CACNA1C-222ENST00000406454 LUZP1Q86V48 1076 aa15.26■□□□□ 0.03
CACNA1C-222ENST00000406454 BICC1Q9H694 974 aaKnown RBP15.26■□□□□ 0.03
CACNA1C-222ENST00000406454 SBNO1A3KN83 1393 aa15.25■□□□□ 0.03
CACNA1C-222ENST00000406454 TCERG1LQ5VWI1 586 aa15.25■□□□□ 0.03
CACNA1C-222ENST00000406454 USP26Q9BXU7 913 aa15.25■□□□□ 0.03
CACNA1C-222ENST00000406454 GNAT2P19087 354 aa15.25■□□□□ 0.03
CACNA1C-222ENST00000406454 ANO6Q4KMQ2 910 aa15.25■□□□□ 0.03
CACNA1C-222ENST00000406454 TMX1Q9H3N1 280 aa15.25■□□□□ 0.03
CACNA1C-222ENST00000406454 MAGEB6P1A0A0J9YX57 407 aa15.25■□□□□ 0.03
CACNA1C-222ENST00000406454 SNW1Q13573 536 aaKnown RBP15.25■□□□□ 0.03
CACNA1C-222ENST00000406454 STXBP4Q6ZWJ1 553 aa15.25■□□□□ 0.03
CACNA1C-222ENST00000406454 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.25■□□□□ 0.03
CACNA1C-222ENST00000406454 CETN1Q12798 172 aa15.25■□□□□ 0.03
CACNA1C-222ENST00000406454 RAB3GAP1Q15042 981 aa15.25■□□□□ 0.03
CACNA1C-222ENST00000406454 RRAGBQ5VZM2 374 aa15.25■□□□□ 0.03
CACNA1C-222ENST00000406454 TRIM47Q96LD4 638 aa15.25■□□□□ 0.03
CACNA1C-222ENST00000406454 BCCIPQ9P287 314 aaKnown RBP eCLIP15.25■□□□□ 0.03
CACNA1C-222ENST00000406454 TAF3Q5VWG9 929 aa15.25■□□□□ 0.03
CACNA1C-222ENST00000406454 CGNQ9P2M7 1197 aaKnown RBP15.25■□□□□ 0.03
CACNA1C-222ENST00000406454 N4BP3O15049 544 aa15.24■□□□□ 0.03
CACNA1C-222ENST00000406454 TOM1O60784 492 aa15.24■□□□□ 0.03
CACNA1C-222ENST00000406454 GOLGA6L7A0A1B0GV03 622 aa15.24■□□□□ 0.03
CACNA1C-222ENST00000406454 TRIM21P19474 475 aaKnown RBP15.24■□□□□ 0.03
CACNA1C-222ENST00000406454 DNA2P51530 1060 aa15.24■□□□□ 0.03
CACNA1C-222ENST00000406454 ALS2CR12Q96Q35 445 aa15.24■□□□□ 0.03
CACNA1C-222ENST00000406454 NYXQ9GZU5 481 aa15.24■□□□□ 0.03
CACNA1C-222ENST00000406454 PLCD4Q9BRC7 762 aa15.24■□□□□ 0.03
CACNA1C-222ENST00000406454 EXOC1Q9NV70 894 aa15.24■□□□□ 0.03
CACNA1C-222ENST00000406454 MAST1Q9Y2H9 1570 aa15.24■□□□□ 0.03
CACNA1C-222ENST00000406454 HELBQ8NG08 1087 aaPredicted RBP15.24■□□□□ 0.03
CACNA1C-222ENST00000406454 INTS4Q96HW7 963 aaKnown RBP15.24■□□□□ 0.03
CACNA1C-222ENST00000406454 CCDC171Q6TFL3 1326 aa15.23■□□□□ 0.03
CACNA1C-222ENST00000406454 ZNF804AQ7Z570 1209 aa15.23■□□□□ 0.03
CACNA1C-222ENST00000406454 HOXB7P09629 217 aa15.23■□□□□ 0.03
CACNA1C-222ENST00000406454 AFMP43652 599 aa15.23■□□□□ 0.03
CACNA1C-222ENST00000406454 WDR78Q5VTH9 848 aa15.23■□□□□ 0.03
CACNA1C-222ENST00000406454 RUFY3Q7L099 469 aa15.23■□□□□ 0.03
CACNA1C-222ENST00000406454 APOBRQ0VD83 1088 aa15.23■□□□□ 0.03
CACNA1C-222ENST00000406454 DHX32Q7L7V1 743 aaKnown RBP15.23■□□□□ 0.03
CACNA1C-222ENST00000406454 CALM1P0DP23 149 aa15.23■□□□□ 0.03
CACNA1C-222ENST00000406454 CALM2P0DP24 149 aa15.23■□□□□ 0.03
CACNA1C-222ENST00000406454 CALM3P0DP25 149 aa15.23■□□□□ 0.03
CACNA1C-222ENST00000406454 PPP4R3BQ5MIZ7 849 aa15.23■□□□□ 0.03
CACNA1C-222ENST00000406454 CHL1O00533 1208 aa15.23■□□□□ 0.03
CACNA1C-222ENST00000406454 SEC24BO95487 1268 aa15.23■□□□□ 0.03
CACNA1C-222ENST00000406454 MARCKSP29966 332 aaPredicted RBP15.23■□□□□ 0.03
CACNA1C-222ENST00000406454 HEATR3Q7Z4Q2 680 aa15.23■□□□□ 0.03
CACNA1C-222ENST00000406454 TRIM35Q9UPQ4 493 aa15.23■□□□□ 0.03
CACNA1C-222ENST00000406454 TPTE2Q6XPS3 522 aa15.22■□□□□ 0.03
CACNA1C-222ENST00000406454 RTL9Q8NET4 1388 aa15.22■□□□□ 0.03
CACNA1C-222ENST00000406454 SPTLC2O15270 562 aa15.22■□□□□ 0.03
CACNA1C-222ENST00000406454 NEBLO76041 1014 aa15.22■□□□□ 0.03
CACNA1C-222ENST00000406454 UBASH3AP57075 661 aa15.22■□□□□ 0.03
CACNA1C-222ENST00000406454 DNAI2Q9GZS0 605 aa15.22■□□□□ 0.03
CACNA1C-222ENST00000406454 GBP2P32456 591 aaPredicted RBP15.22■□□□□ 0.03
CACNA1C-222ENST00000406454 PTPDC1A2A3K4 754 aa15.22■□□□□ 0.03
CACNA1C-222ENST00000406454 ERMNQ8TAM6 284 aa15.22■□□□□ 0.03
CACNA1C-222ENST00000406454 STAT6P42226 847 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms