RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 MYOM2P54296 1465 aa13.61□□□□□ -0.23
RAPGEF3-204ENST00000405493 MAGEB6P1A0A0J9YX57 407 aa13.61□□□□□ -0.23
RAPGEF3-204ENST00000405493 XRCC6P12956 609 aaKnown RBP eCLIP13.61□□□□□ -0.23
RAPGEF3-204ENST00000405493 CHMP4BP1P59074 171 aa13.61□□□□□ -0.23
RAPGEF3-204ENST00000405493 ATP8B2P98198 1209 aa13.61□□□□□ -0.23
RAPGEF3-204ENST00000405493 JARID2Q92833 1246 aaPredicted RBP13.61□□□□□ -0.23
RAPGEF3-204ENST00000405493 CAMK4Q16566 473 aa13.61□□□□□ -0.23
RAPGEF3-204ENST00000405493 NCOA7Q8NI08 942 aa13.61□□□□□ -0.23
RAPGEF3-204ENST00000405493 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.61□□□□□ -0.23
RAPGEF3-204ENST00000405493 PPP1R12BO60237 982 aaPredicted RBP13.61□□□□□ -0.23
RAPGEF3-204ENST00000405493 TNFAIP1Q13829 316 aa13.61□□□□□ -0.23
RAPGEF3-204ENST00000405493 ARHGAP27Q6ZUM4 889 aa13.61□□□□□ -0.23
RAPGEF3-204ENST00000405493 PDCL2Q8N4E4 241 aa13.61□□□□□ -0.23
RAPGEF3-204ENST00000405493 ZMYND15Q9H091 742 aa13.61□□□□□ -0.23
RAPGEF3-204ENST00000405493 GOLGA8AA7E2F4 631 aa13.61□□□□□ -0.23
RAPGEF3-204ENST00000405493 GOLGA8BA8MQT2 603 aa13.61□□□□□ -0.23
RAPGEF3-204ENST00000405493 PICALMQ13492 652 aa13.61□□□□□ -0.23
RAPGEF3-204ENST00000405493 C2CD5Q86YS7 1000 aa13.61□□□□□ -0.23
RAPGEF3-204ENST00000405493 SH2B1Q9NRF2 756 aaPredicted RBP13.61□□□□□ -0.23
RAPGEF3-204ENST00000405493 SKIDA1Q1XH10 827 aa13.6□□□□□ -0.23
RAPGEF3-204ENST00000405493 FERMT3Q86UX7 667 aa13.6□□□□□ -0.23
RAPGEF3-204ENST00000405493 C8orf58Q8NAV2 365 aa13.6□□□□□ -0.23
RAPGEF3-204ENST00000405493 SLC4A4Q9Y6R1 1079 aa13.6□□□□□ -0.23
RAPGEF3-204ENST00000405493 SPATA31A3Q5VYP0 1347 aa13.6□□□□□ -0.23
RAPGEF3-204ENST00000405493 KIF20AO95235 890 aa13.6□□□□□ -0.23
RAPGEF3-204ENST00000405493 SSRP1Q08945 709 aaKnown RBP13.6□□□□□ -0.23
RAPGEF3-204ENST00000405493 ARHGEF6Q15052 776 aa13.6□□□□□ -0.23
RAPGEF3-204ENST00000405493 LOC102724428A0A0B4J2F2 783 aa13.6□□□□□ -0.23
RAPGEF3-204ENST00000405493 CBFA2T2O43439 604 aa13.6□□□□□ -0.23
RAPGEF3-204ENST00000405493 SIK1P57059 783 aa13.6□□□□□ -0.23
RAPGEF3-204ENST00000405493 TMOD4Q9NZQ9 345 aa13.6□□□□□ -0.23
RAPGEF3-204ENST00000405493 SSFA2P28290 1259 aa13.6□□□□□ -0.23
RAPGEF3-204ENST00000405493 MRPL50Q8N5N7 158 aaKnown RBP13.6□□□□□ -0.23
RAPGEF3-204ENST00000405493 MAP3K4Q9Y6R4 1608 aa13.59□□□□□ -0.23
RAPGEF3-204ENST00000405493 ROBO2Q9HCK4 1378 aa13.59□□□□□ -0.23
RAPGEF3-204ENST00000405493 IGHDP01880 384 aa13.59□□□□□ -0.23
RAPGEF3-204ENST00000405493 CEP57L1Q8IYX8 460 aa13.59□□□□□ -0.23
RAPGEF3-204ENST00000405493 ERCC4Q92889 916 aaPredicted RBP13.59□□□□□ -0.23
RAPGEF3-204ENST00000405493 PTPRTO14522 1441 aa13.59□□□□□ -0.23
RAPGEF3-204ENST00000405493 PPIP5K2O43314 1243 aa13.59□□□□□ -0.23
RAPGEF3-204ENST00000405493 TMEM67Q5HYA8 995 aa13.59□□□□□ -0.23
RAPGEF3-204ENST00000405493 DEF6Q9H4E7 631 aa13.59□□□□□ -0.23
RAPGEF3-204ENST00000405493 RBM27Q9P2N5 1060 aaKnown RBP13.59□□□□□ -0.23
RAPGEF3-204ENST00000405493 BIN2Q9UBW5 565 aaPredicted RBP13.59□□□□□ -0.23
RAPGEF3-204ENST00000405493 STX8Q9UNK0 236 aa13.59□□□□□ -0.23
RAPGEF3-204ENST00000405493 NLRP5P59047 1200 aa13.59□□□□□ -0.23
RAPGEF3-204ENST00000405493 C8orf34Q49A92 452 aa13.59□□□□□ -0.23
RAPGEF3-204ENST00000405493 PUM3Q15397 648 aaKnown RBP13.58□□□□□ -0.23
RAPGEF3-204ENST00000405493 VTI1AQ96AJ9 217 aa13.58□□□□□ -0.23
RAPGEF3-204ENST00000405493 ATP7BP35670 1465 aa13.58□□□□□ -0.23
RAPGEF3-204ENST00000405493 MCM5P33992 734 aa13.58□□□□□ -0.24
RAPGEF3-204ENST00000405493 LUC7LQ9NQ29 371 aaKnown RBP13.58□□□□□ -0.24
RAPGEF3-204ENST00000405493 FAM177A1Q8N128 213 aaPredicted RBP13.58□□□□□ -0.24
RAPGEF3-204ENST00000405493 PHACTR3Q96KR7 559 aa13.58□□□□□ -0.24
RAPGEF3-204ENST00000405493 SLC9C2Q5TAH2 1124 aa13.58□□□□□ -0.24
RAPGEF3-204ENST00000405493 IQSEC3Q9UPP2 1182 aaPredicted RBP13.58□□□□□ -0.24
RAPGEF3-204ENST00000405493 TXLNBQ8N3L3 684 aa13.58□□□□□ -0.24
RAPGEF3-204ENST00000405493 SHROOM2Q13796 1616 aa13.57□□□□□ -0.24
RAPGEF3-204ENST00000405493 A1BGP04217 495 aa13.57□□□□□ -0.24
RAPGEF3-204ENST00000405493 ITGA6P23229 1130 aa13.57□□□□□ -0.24
RAPGEF3-204ENST00000405493 DHX8Q14562 1220 aaKnown RBP13.57□□□□□ -0.24
RAPGEF3-204ENST00000405493 CC2D2BQ6DHV5 1058 aa13.57□□□□□ -0.24
RAPGEF3-204ENST00000405493 FAM89AQ96GI7 184 aa13.57□□□□□ -0.24
RAPGEF3-204ENST00000405493 MAP3K11Q16584 847 aa13.57□□□□□ -0.24
RAPGEF3-204ENST00000405493 MYO6Q9UM54 1294 aa13.57□□□□□ -0.24
RAPGEF3-204ENST00000405493 ADGRL3Q9HAR2 1447 aa13.57□□□□□ -0.24
RAPGEF3-204ENST00000405493 CCDC148Q8NFR7 591 aa13.57□□□□□ -0.24
RAPGEF3-204ENST00000405493 LARP6Q9BRS8 491 aaKnown RBP13.57□□□□□ -0.24
RAPGEF3-204ENST00000405493 ZNF408Q9H9D4 720 aa13.57□□□□□ -0.24
RAPGEF3-204ENST00000405493 SPDYE4A6NLX3 237 aa13.56□□□□□ -0.24
RAPGEF3-204ENST00000405493 EYA2O00167 538 aa13.56□□□□□ -0.24
RAPGEF3-204ENST00000405493 BRDTQ58F21 947 aaPredicted RBP13.56□□□□□ -0.24
RAPGEF3-204ENST00000405493 ZNF496Q96IT1 587 aaPredicted RBP13.56□□□□□ -0.24
RAPGEF3-204ENST00000405493 AATKQ6ZMQ8 1374 aa13.56□□□□□ -0.24
RAPGEF3-204ENST00000405493 DLGAP5Q15398 846 aa13.56□□□□□ -0.24
RAPGEF3-204ENST00000405493 TAF3Q5VWG9 929 aa13.56□□□□□ -0.24
RAPGEF3-204ENST00000405493 MROH5Q6ZUA9 1318 aa13.56□□□□□ -0.24
RAPGEF3-204ENST00000405493 CALM1P0DP23 149 aa13.56□□□□□ -0.24
RAPGEF3-204ENST00000405493 CALM2P0DP24 149 aa13.56□□□□□ -0.24
RAPGEF3-204ENST00000405493 CALM3P0DP25 149 aa13.56□□□□□ -0.24
RAPGEF3-204ENST00000405493 HCLS1P14317 486 aaPredicted RBP13.56□□□□□ -0.24
RAPGEF3-204ENST00000405493 ATP2B4P23634 1241 aa13.56□□□□□ -0.24
RAPGEF3-204ENST00000405493 ANKRD44Q8N8A2 993 aa13.56□□□□□ -0.24
RAPGEF3-204ENST00000405493 TTC41PQ6P2S7 1318 aa13.56□□□□□ -0.24
RAPGEF3-204ENST00000405493 GUCY1B3Q02153 619 aa13.56□□□□□ -0.24
RAPGEF3-204ENST00000405493 KLHL40Q2TBA0 621 aa13.56□□□□□ -0.24
RAPGEF3-204ENST00000405493 TSHZ3Q63HK5 1081 aa13.56□□□□□ -0.24
RAPGEF3-204ENST00000405493 STXBP4Q6ZWJ1 553 aa13.56□□□□□ -0.24
RAPGEF3-204ENST00000405493 WTAPQ15007 396 aa13.56□□□□□ -0.24
RAPGEF3-204ENST00000405493 RPS8P62241 208 aaKnown RBP13.55□□□□□ -0.24
RAPGEF3-204ENST00000405493 MSL1Q68DK7 614 aa13.55□□□□□ -0.24
RAPGEF3-204ENST00000405493 LGR6Q9HBX8 967 aa13.55□□□□□ -0.24
RAPGEF3-204ENST00000405493 VAMP4O75379 141 aa13.55□□□□□ -0.24
RAPGEF3-204ENST00000405493 POTEJP0CG39 1038 aa13.55□□□□□ -0.24
RAPGEF3-204ENST00000405493 TBC1D9Q6ZT07 1266 aa13.55□□□□□ -0.24
RAPGEF3-204ENST00000405493 C8orf76Q96K31 380 aa13.55□□□□□ -0.24
RAPGEF3-204ENST00000405493 SMTNL1A8MU46 457 aa13.55□□□□□ -0.24
RAPGEF3-204ENST00000405493 CWF19L2Q2TBE0 894 aaKnown RBP13.55□□□□□ -0.24
RAPGEF3-204ENST00000405493 EAPPQ56P03 285 aaPredicted RBP13.55□□□□□ -0.24
RAPGEF3-204ENST00000405493 TEX11Q8IYF3 940 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms