RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 CDC37L1Q7L3B6 337 aa16.68■□□□□ 0.26
ATG3-202ENST00000402314 SYTL4Q96C24 671 aaPredicted RBP16.68■□□□□ 0.26
ATG3-202ENST00000402314 BLOC1S2Q6QNY1 142 aa16.67■□□□□ 0.26
ATG3-202ENST00000402314 TRIM5Q9C035 493 aa16.67■□□□□ 0.26
ATG3-202ENST00000402314 COPRSQ9NQ92 184 aa16.67■□□□□ 0.26
ATG3-202ENST00000402314 ADAMTSL3P82987 1691 aa16.67■□□□□ 0.26
ATG3-202ENST00000402314 A0A087WWV3 80 aa16.67■□□□□ 0.26
ATG3-202ENST00000402314 TAF5LO75529 589 aa16.67■□□□□ 0.26
ATG3-202ENST00000402314 LETM1O95202 739 aaPredicted RBP16.67■□□□□ 0.26
ATG3-202ENST00000402314 TOM1L2Q6ZVM7 507 aa16.67■□□□□ 0.26
ATG3-202ENST00000402314 A0A0G2JLW4 131 aa16.67■□□□□ 0.26
ATG3-202ENST00000402314 TNNT1P13805 278 aa16.67■□□□□ 0.26
ATG3-202ENST00000402314 LARP1BQ659C4 914 aaKnown RBP16.67■□□□□ 0.26
ATG3-202ENST00000402314 KCNB2Q92953 911 aa16.67■□□□□ 0.26
ATG3-202ENST00000402314 LIG1P18858 919 aa16.66■□□□□ 0.26
ATG3-202ENST00000402314 ARID5BQ14865 1188 aa16.66■□□□□ 0.26
ATG3-202ENST00000402314 TM6SF1Q9BZW5 370 aa16.66■□□□□ 0.26
ATG3-202ENST00000402314 PRDM11Q9NQV5 511 aa16.66■□□□□ 0.26
ATG3-202ENST00000402314 SIPA1L3O60292 1781 aaPredicted RBP16.66■□□□□ 0.26
ATG3-202ENST00000402314 KIF20AO95235 890 aa16.66■□□□□ 0.26
ATG3-202ENST00000402314 FOSBP53539 338 aa16.66■□□□□ 0.26
ATG3-202ENST00000402314 TOB2Q14106 344 aaPredicted RBP16.66■□□□□ 0.26
ATG3-202ENST00000402314 ST7Q9NRC1 585 aa16.66■□□□□ 0.26
ATG3-202ENST00000402314 STRN4Q9NRL3 753 aa16.66■□□□□ 0.26
ATG3-202ENST00000402314 GTF2E1P29083 439 aaPredicted RBP16.65■□□□□ 0.26
ATG3-202ENST00000402314 CRYBG1Q9Y4K1 1723 aa16.65■□□□□ 0.26
ATG3-202ENST00000402314 JAK2O60674 1132 aa16.65■□□□□ 0.26
ATG3-202ENST00000402314 TPD52L1Q16890 204 aaPredicted RBP16.65■□□□□ 0.26
ATG3-202ENST00000402314 MED23Q9ULK4 1368 aa16.65■□□□□ 0.26
ATG3-202ENST00000402314 CASP7P55210 303 aa16.64■□□□□ 0.26
ATG3-202ENST00000402314 LRRC24Q50LG9 513 aa16.64■□□□□ 0.26
ATG3-202ENST00000402314 TRMT1Q9NXH9 659 aaKnown RBP16.64■□□□□ 0.26
ATG3-202ENST00000402314 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.64■□□□□ 0.264e-11■■■■■ 34.8
ATG3-202ENST00000402314 HIP1O00291 1037 aa16.64■□□□□ 0.25
ATG3-202ENST00000402314 GOLIM4O00461 696 aa16.64■□□□□ 0.25
ATG3-202ENST00000402314 RPS6KB1P23443 525 aa16.64■□□□□ 0.25
ATG3-202ENST00000402314 ANKRD7Q92527 254 aa16.64■□□□□ 0.25
ATG3-202ENST00000402314 DDX11Q96FC9 970 aa16.64■□□□□ 0.25
ATG3-202ENST00000402314 CCDC192P0DO97 292 aa16.64■□□□□ 0.25
ATG3-202ENST00000402314 ATP5JP18859 108 aa16.64■□□□□ 0.25
ATG3-202ENST00000402314 ZSCAN31Q96LW9 406 aaPredicted RBP16.64■□□□□ 0.25
ATG3-202ENST00000402314 PUS3Q9BZE2 481 aaKnown RBP16.64■□□□□ 0.25
ATG3-202ENST00000402314 SH2B1Q9NRF2 756 aaPredicted RBP16.64■□□□□ 0.25
ATG3-202ENST00000402314 SPATA31A3Q5VYP0 1347 aa16.63■□□□□ 0.25
ATG3-202ENST00000402314 ANO6Q4KMQ2 910 aa16.63■□□□□ 0.25
ATG3-202ENST00000402314 PLBD2Q8NHP8 589 aa16.63■□□□□ 0.25
ATG3-202ENST00000402314 FUCA2Q9BTY2 467 aa16.63■□□□□ 0.25
ATG3-202ENST00000402314 GOLGA6L6A8MZA4 724 aa16.63■□□□□ 0.25
ATG3-202ENST00000402314 FOXO4P98177 505 aa16.63■□□□□ 0.25
ATG3-202ENST00000402314 RABL6Q3YEC7 729 aaPredicted RBP16.63■□□□□ 0.25
ATG3-202ENST00000402314 PLCD3Q8N3E9 789 aa16.63■□□□□ 0.25
ATG3-202ENST00000402314 ZBTB9Q96C00 473 aa16.63■□□□□ 0.25
ATG3-202ENST00000402314 ZNF609O15014 1411 aa16.63■□□□□ 0.25
ATG3-202ENST00000402314 CEBPZQ03701 1054 aaKnown RBP16.62■□□□□ 0.25
ATG3-202ENST00000402314 TTC6Q86TZ1 520 aa16.62■□□□□ 0.25
ATG3-202ENST00000402314 TMEM87AQ8NBN3 555 aa16.62■□□□□ 0.25
ATG3-202ENST00000402314 CAMTA1Q9Y6Y1 1673 aa16.62■□□□□ 0.25
ATG3-202ENST00000402314 CYP21A2P08686 494 aa16.62■□□□□ 0.25
ATG3-202ENST00000402314 PSMA5P28066 241 aa16.62■□□□□ 0.25
ATG3-202ENST00000402314 RNF20Q5VTR2 975 aa16.62■□□□□ 0.25
ATG3-202ENST00000402314 CADPS2Q86UW7 1296 aa16.62■□□□□ 0.25
ATG3-202ENST00000402314 ZCRB1Q8TBF4 217 aaKnown RBP16.62■□□□□ 0.25
ATG3-202ENST00000402314 DACT1Q9NYF0 836 aa16.62■□□□□ 0.25
ATG3-202ENST00000402314 ALS2Q96Q42 1657 aa16.62■□□□□ 0.25
ATG3-202ENST00000402314 SCN11AQ9UI33 1791 aa16.62■□□□□ 0.25
ATG3-202ENST00000402314 USP27XA6NNY8 438 aa16.62■□□□□ 0.25
ATG3-202ENST00000402314 ATG9AQ7Z3C6 839 aa16.62■□□□□ 0.25
ATG3-202ENST00000402314 GOLGA6L4A6NEF3 574 aa16.61■□□□□ 0.25
ATG3-202ENST00000402314 TYRO3Q06418 890 aa16.61■□□□□ 0.25
ATG3-202ENST00000402314 CCDC112Q8NEF3 446 aa16.61■□□□□ 0.25
ATG3-202ENST00000402314 SNRKQ9NRH2 765 aa16.61■□□□□ 0.25
ATG3-202ENST00000402314 BRINP3Q76B58 766 aa16.61■□□□□ 0.25
ATG3-202ENST00000402314 CHST3Q7LGC8 479 aa16.61■□□□□ 0.25
ATG3-202ENST00000402314 DNAJC25Q9H1X3 360 aa16.61■□□□□ 0.25
ATG3-202ENST00000402314 CTNNA3Q9UI47 895 aa16.61■□□□□ 0.25
ATG3-202ENST00000402314 TNS3Q68CZ2 1445 aa16.6■□□□□ 0.25
ATG3-202ENST00000402314 HSP90B1P14625 803 aaKnown RBP16.6■□□□□ 0.25
ATG3-202ENST00000402314 STOX1Q6ZVD7 989 aa16.6■□□□□ 0.25
ATG3-202ENST00000402314 CBX8Q9HC52 389 aa16.6■□□□□ 0.25
ATG3-202ENST00000402314 MRVI1Q9Y6F6 885 aa16.6■□□□□ 0.25
ATG3-202ENST00000402314 Q6ZUG5 572 aa16.6■□□□□ 0.25
ATG3-202ENST00000402314 SYNE4Q8N205 404 aa16.6■□□□□ 0.25
ATG3-202ENST00000402314 NUP62CLQ9H1M0 184 aa16.6■□□□□ 0.25
ATG3-202ENST00000402314 CCDC144BQ3MJ40 725 aa16.59■□□□□ 0.25
ATG3-202ENST00000402314 HSP90AB3PQ58FF7 597 aa16.59■□□□□ 0.25
ATG3-202ENST00000402314 CCDC144CPQ8IYA2 1237 aa16.59■□□□□ 0.25
ATG3-202ENST00000402314 CACTINQ8WUQ7 758 aaKnown RBP16.59■□□□□ 0.25
ATG3-202ENST00000402314 BRF1Q92994 677 aa16.59■□□□□ 0.25
ATG3-202ENST00000402314 NEK1Q96PY6 1258 aa16.59■□□□□ 0.25
ATG3-202ENST00000402314 TNMDQ9H2S6 317 aa16.59■□□□□ 0.25
ATG3-202ENST00000402314 OGFRQ9NZT2 677 aa16.59■□□□□ 0.25
ATG3-202ENST00000402314 ATP6V1DQ9Y5K8 247 aa16.59■□□□□ 0.25
ATG3-202ENST00000402314 ADAMTS7Q9UKP4 1686 aa16.59■□□□□ 0.25
ATG3-202ENST00000402314 CTIFO43310 598 aaKnown RBP16.59■□□□□ 0.25
ATG3-202ENST00000402314 MAP3K11Q16584 847 aa16.59■□□□□ 0.25
ATG3-202ENST00000402314 FILIP1Q7Z7B0 1213 aa16.59■□□□□ 0.25
ATG3-202ENST00000402314 ERCC4Q92889 916 aaPredicted RBP16.59■□□□□ 0.25
ATG3-202ENST00000402314 HAUS7Q99871 368 aa16.59■□□□□ 0.25
ATG3-202ENST00000402314 CWC25Q9NXE8 425 aaPredicted RBP16.59■□□□□ 0.25
ATG3-202ENST00000402314 NAP1L2Q9ULW6 460 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms