RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 TRPM7Q96QT4 1865 aa18.96■□□□□ 0.63
VAMP1-203ENST00000400911 HOXB7P09629 217 aa18.95■□□□□ 0.62
VAMP1-203ENST00000400911 TRIM28Q13263 835 aaKnown RBP18.95■□□□□ 0.62
VAMP1-203ENST00000400911 KIF4BQ2VIQ3 1234 aa18.95■□□□□ 0.62
VAMP1-203ENST00000400911 HYPKQ9NX55 129 aa18.95■□□□□ 0.62
VAMP1-203ENST00000400911 VIL1P09327 827 aaKnown RBP18.94■□□□□ 0.62
VAMP1-203ENST00000400911 DUSP27Q5VZP5 1158 aa18.94■□□□□ 0.62
VAMP1-203ENST00000400911 RUNDC1Q96C34 613 aa18.94■□□□□ 0.62
VAMP1-203ENST00000400911 SEC31BQ9NQW1 1179 aa18.94■□□□□ 0.62
VAMP1-203ENST00000400911 ASTN2O75129 1339 aaPredicted RBP18.94■□□□□ 0.62
VAMP1-203ENST00000400911 TRPA1O75762 1119 aa18.93■□□□□ 0.62
VAMP1-203ENST00000400911 SULF1Q8IWU6 871 aa18.93■□□□□ 0.62
VAMP1-203ENST00000400911 RNF186Q9NXI6 227 aa18.93■□□□□ 0.62
VAMP1-203ENST00000400911 SAGE1Q9NXZ1 904 aa18.93■□□□□ 0.62
VAMP1-203ENST00000400911 GGA3Q9NZ52 723 aa18.93■□□□□ 0.62
VAMP1-203ENST00000400911 ANKIB1Q9P2G1 1089 aa18.93■□□□□ 0.62
VAMP1-203ENST00000400911 G3V3G9 751 aa18.92■□□□□ 0.62
VAMP1-203ENST00000400911 UFL1O94874 794 aa18.92■□□□□ 0.62
VAMP1-203ENST00000400911 DCAF8Q5TAQ9 597 aa18.92■□□□□ 0.62
VAMP1-203ENST00000400911 RIC3Q7Z5B4 369 aa18.92■□□□□ 0.62
VAMP1-203ENST00000400911 ZBTB38Q8NAP3 1195 aaPredicted RBP18.92■□□□□ 0.62
VAMP1-203ENST00000400911 PODXL2Q9NZ53 605 aa18.92■□□□□ 0.62
VAMP1-203ENST00000400911 ANKRD36CQ5JPF3 1778 aa18.91■□□□□ 0.62
VAMP1-203ENST00000400911 CSRNP1Q96S65 589 aa18.91■□□□□ 0.62
VAMP1-203ENST00000400911 GGA1Q9UJY5 639 aa18.91■□□□□ 0.62
VAMP1-203ENST00000400911 ADAMTS8Q9UP79 889 aa18.91■□□□□ 0.62
VAMP1-203ENST00000400911 COL4A1P02462 1669 aa18.91■□□□□ 0.62
VAMP1-203ENST00000400911 LAMB2P55268 1798 aa18.91■□□□□ 0.62
VAMP1-203ENST00000400911 SCARF1Q14162 830 aa18.9■□□□□ 0.62
VAMP1-203ENST00000400911 WDR43Q15061 677 aaKnown RBP eCLIP18.9■□□□□ 0.62
VAMP1-203ENST00000400911 JARID2Q92833 1246 aaPredicted RBP18.9■□□□□ 0.62
VAMP1-203ENST00000400911 CDCA5Q96FF9 252 aa18.9■□□□□ 0.62
VAMP1-203ENST00000400911 PHAXQ9H814 394 aaKnown RBP18.9■□□□□ 0.62
VAMP1-203ENST00000400911 MBIPQ9NS73 344 aa18.9■□□□□ 0.62
VAMP1-203ENST00000400911 SLC10A3P09131 477 aa18.89■□□□□ 0.61
VAMP1-203ENST00000400911 ZNF280AP59817 542 aaPredicted RBP18.89■□□□□ 0.61
VAMP1-203ENST00000400911 GOLGA2Q08379 1002 aa18.89■□□□□ 0.61
VAMP1-203ENST00000400911 ANGEL2Q5VTE6 544 aaKnown RBP18.89■□□□□ 0.61
VAMP1-203ENST00000400911 RSBN1LQ6PCB5 846 aaPredicted RBP18.89■□□□□ 0.61
VAMP1-203ENST00000400911 CCDC85AQ96PX6 553 aaPredicted RBP18.89■□□□□ 0.61
VAMP1-203ENST00000400911 MYD88Q99836 296 aa18.89■□□□□ 0.61
VAMP1-203ENST00000400911 MYBBP1AQ9BQG0 1328 aaKnown RBP18.89■□□□□ 0.61
VAMP1-203ENST00000400911 HSP90B1P14625 803 aaKnown RBP18.88■□□□□ 0.61
VAMP1-203ENST00000400911 CCDC152Q4G0S7 254 aa18.88■□□□□ 0.61
VAMP1-203ENST00000400911 AGBL3Q8NEM8 1001 aa18.88■□□□□ 0.61
VAMP1-203ENST00000400911 LRRC37AA6NMS7 1700 aa18.88■□□□□ 0.61
VAMP1-203ENST00000400911 TAF1P21675 1872 aa18.88■□□□□ 0.61
VAMP1-203ENST00000400911 ELL2O00472 640 aaPredicted RBP18.87■□□□□ 0.61
VAMP1-203ENST00000400911 SOX10P56693 466 aa18.86■□□□□ 0.61
VAMP1-203ENST00000400911 DDX10Q13206 875 aaKnown RBP18.86■□□□□ 0.61
VAMP1-203ENST00000400911 CCDC191Q8NCU4 936 aa18.86■□□□□ 0.61
VAMP1-203ENST00000400911 DDX60Q8IY21 1712 aaKnown RBP18.86■□□□□ 0.61
VAMP1-203ENST00000400911 TNRC18O15417 2968 aaPredicted RBP18.85■□□□□ 0.61
VAMP1-203ENST00000400911 PDE8AO60658 829 aa18.85■□□□□ 0.61
VAMP1-203ENST00000400911 PCCAP05165 728 aaPredicted RBP18.85■□□□□ 0.61
VAMP1-203ENST00000400911 USP17L8P0C7I0 530 aa18.85■□□□□ 0.61
VAMP1-203ENST00000400911 ZNF853P0CG23 659 aa18.85■□□□□ 0.61
VAMP1-203ENST00000400911 RASAL3Q86YV0 1011 aa18.85■□□□□ 0.61
VAMP1-203ENST00000400911 GMLQ99445 158 aa18.85■□□□□ 0.61
VAMP1-203ENST00000400911 MYOZ2Q9NPC6 264 aa18.85■□□□□ 0.61
VAMP1-203ENST00000400911 SCAF8Q9UPN6 1271 aaKnown RBP18.85■□□□□ 0.61
VAMP1-203ENST00000400911 CASP8AP2Q9UKL3 1982 aa18.84■□□□□ 0.61
VAMP1-203ENST00000400911 WTIPA6NIX2 430 aaPredicted RBP18.84■□□□□ 0.61
VAMP1-203ENST00000400911 ANKRD18AQ8IVF6 992 aa18.84■□□□□ 0.61
VAMP1-203ENST00000400911 CWC25Q9NXE8 425 aaPredicted RBP18.84■□□□□ 0.61
VAMP1-203ENST00000400911 XDHP47989 1333 aa18.83■□□□□ 0.61
VAMP1-203ENST00000400911 USP17L3A6NCW0 530 aa18.83■□□□□ 0.6
VAMP1-203ENST00000400911 USP17L4A6NCW7 530 aa18.83■□□□□ 0.6
VAMP1-203ENST00000400911 PRAMEF18Q5VWM3 479 aa18.83■□□□□ 0.6
VAMP1-203ENST00000400911 MOB2Q70IA6 237 aa18.83■□□□□ 0.6
VAMP1-203ENST00000400911 USP17L1Q7RTZ2 530 aa18.83■□□□□ 0.6
VAMP1-203ENST00000400911 REM2Q8IYK8 340 aaPredicted RBP18.83■□□□□ 0.6
VAMP1-203ENST00000400911 ATP2B4P23634 1241 aa18.82■□□□□ 0.6
VAMP1-203ENST00000400911 FKBP1BP68106 108 aa18.82■□□□□ 0.6
VAMP1-203ENST00000400911 PODNQ7Z5L7 613 aa18.82■□□□□ 0.6
VAMP1-203ENST00000400911 CTU1Q7Z7A3 348 aaKnown RBP18.82■□□□□ 0.6
VAMP1-203ENST00000400911 METTL22Q9BUU2 404 aaPredicted RBP18.82■□□□□ 0.6
VAMP1-203ENST00000400911 IFT57Q9NWB7 429 aa18.82■□□□□ 0.6
VAMP1-203ENST00000400911 UBE2Q2LH0YL09 131 aa18.81■□□□□ 0.6
VAMP1-203ENST00000400911 NBPF9Q3BBW0 867 aa18.81■□□□□ 0.6
VAMP1-203ENST00000400911 C8orf58Q8NAV2 365 aa18.81■□□□□ 0.6
VAMP1-203ENST00000400911 ZNF609O15014 1411 aa18.81■□□□□ 0.6
VAMP1-203ENST00000400911 PITPNM2Q9BZ72 1349 aa18.8■□□□□ 0.6
VAMP1-203ENST00000400911 APAF1O14727 1248 aa18.8■□□□□ 0.6
VAMP1-203ENST00000400911 GNAI1P63096 354 aa18.8■□□□□ 0.6
VAMP1-203ENST00000400911 MXD3Q9BW11 206 aa18.8■□□□□ 0.6
VAMP1-203ENST00000400911 DDX58O95786 925 aaKnown RBP18.79■□□□□ 0.6
VAMP1-203ENST00000400911 CTSWP56202 376 aa18.79■□□□□ 0.6
VAMP1-203ENST00000400911 MINPP1Q9UNW1 487 aa18.79■□□□□ 0.6
VAMP1-203ENST00000400911 MAP3K2Q9Y2U5 619 aa18.79■□□□□ 0.6
VAMP1-203ENST00000400911 TBC1D8O95759 1140 aa18.78■□□□□ 0.6
VAMP1-203ENST00000400911 TTLL12Q14166 644 aaPredicted RBP18.78■□□□□ 0.6
VAMP1-203ENST00000400911 CDC5LQ99459 802 aaKnown RBP18.78■□□□□ 0.6
VAMP1-203ENST00000400911 BSDC1Q9NW68 430 aaPredicted RBP18.78■□□□□ 0.6
VAMP1-203ENST00000400911 HPS5Q9UPZ3 1129 aa18.78■□□□□ 0.6
VAMP1-203ENST00000400911 IGKV5-2P06315 115 aa18.77■□□□□ 0.6
VAMP1-203ENST00000400911 CALD1Q05682 793 aaKnown RBP18.77■□□□□ 0.6
VAMP1-203ENST00000400911 DACT2Q5SW24 774 aa18.77■□□□□ 0.6
VAMP1-203ENST00000400911 CCDC30Q5VVM6 783 aa18.77■□□□□ 0.6
VAMP1-203ENST00000400911 OGFOD1Q8N543 542 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms