RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 SOS1Q07889 1333 aaPredicted RBP19.98■□□□□ 0.79
PTPRA-205ENST00000399903 AMOTQ4VCS5 1084 aa19.98■□□□□ 0.79
PTPRA-205ENST00000399903 AEBP2Q6ZN18 517 aaPredicted RBP19.98■□□□□ 0.79
PTPRA-205ENST00000399903 MNS1Q8NEH6 495 aa19.98■□□□□ 0.79
PTPRA-205ENST00000399903 C9orf78Q9NZ63 289 aaPredicted RBP19.98■□□□□ 0.79
PTPRA-205ENST00000399903 NPHP3Q7Z494 1330 aa19.98■□□□□ 0.79
PTPRA-205ENST00000399903 GYS2P54840 703 aa19.98■□□□□ 0.79
PTPRA-205ENST00000399903 ZRSR1Q15695 479 aaKnown RBP19.98■□□□□ 0.79
PTPRA-205ENST00000399903 TMCO3Q6UWJ1 677 aa19.98■□□□□ 0.79
PTPRA-205ENST00000399903 AOPEPQ8N6M6 819 aa19.98■□□□□ 0.79
PTPRA-205ENST00000399903 UBXN4Q92575 508 aa19.98■□□□□ 0.79
PTPRA-205ENST00000399903 BEND3Q5T5X7 828 aa19.97■□□□□ 0.79
PTPRA-205ENST00000399903 PGBD1Q96JS3 809 aa19.97■□□□□ 0.79
PTPRA-205ENST00000399903 FTOQ9C0B1 505 aaKnown RBP eCLIP19.97■□□□□ 0.79
PTPRA-205ENST00000399903 VPS53Q5VIR6 699 aa19.97■□□□□ 0.79
PTPRA-205ENST00000399903 JAK2O60674 1132 aa19.97■□□□□ 0.79
PTPRA-205ENST00000399903 PDCP20941 246 aa19.97■□□□□ 0.79
PTPRA-205ENST00000399903 DNAI1Q9UI46 699 aa19.97■□□□□ 0.79
PTPRA-205ENST00000399903 PNMA6AP0CW24 399 aaPredicted RBP19.96■□□□□ 0.79
PTPRA-205ENST00000399903 RUFY2Q8WXA3 655 aa19.96■□□□□ 0.79
PTPRA-205ENST00000399903 RSPH14Q9UHP6 348 aa19.96■□□□□ 0.79
PTPRA-205ENST00000399903 URI1O94763 535 aaPredicted RBP19.96■□□□□ 0.79
PTPRA-205ENST00000399903 CYP2C19P33261 490 aa19.96■□□□□ 0.79
PTPRA-205ENST00000399903 ST5P78524 1137 aa19.96■□□□□ 0.79
PTPRA-205ENST00000399903 PI4K2BQ8TCG2 481 aa19.96■□□□□ 0.79
PTPRA-205ENST00000399903 RBM8AQ9Y5S9 174 aaKnown RBP19.96■□□□□ 0.79
PTPRA-205ENST00000399903 TMC6Q7Z403 805 aa19.96■□□□□ 0.79
PTPRA-205ENST00000399903 FEZ2Q9UHY8 353 aaPredicted RBP19.96■□□□□ 0.79
PTPRA-205ENST00000399903 KLHDC4Q8TBB5 520 aa19.95■□□□□ 0.78
PTPRA-205ENST00000399903 NYAP1Q6ZVC0 841 aa19.95■□□□□ 0.78
PTPRA-205ENST00000399903 SIL1Q9H173 461 aa19.95■□□□□ 0.78
PTPRA-205ENST00000399903 DBF4Q9UBU7 674 aaPredicted RBP19.95■□□□□ 0.78
PTPRA-205ENST00000399903 ADCY9O60503 1353 aa19.94■□□□□ 0.78
PTPRA-205ENST00000399903 BLOC1S2Q6QNY1 142 aa19.94■□□□□ 0.78
PTPRA-205ENST00000399903 BIN1O00499 593 aa19.94■□□□□ 0.78
PTPRA-205ENST00000399903 TRIM66O15016 1216 aa19.94■□□□□ 0.78
PTPRA-205ENST00000399903 PTPN21Q16825 1174 aa19.94■□□□□ 0.78
PTPRA-205ENST00000399903 ISM2Q6H9L7 571 aa19.94■□□□□ 0.78
PTPRA-205ENST00000399903 TATP17735 454 aaPredicted RBP19.94■□□□□ 0.78
PTPRA-205ENST00000399903 CCZ1BP86790 482 aa19.94■□□□□ 0.78
PTPRA-205ENST00000399903 CCZ1P86791 482 aaPredicted RBP19.94■□□□□ 0.78
PTPRA-205ENST00000399903 GUCY1B3Q02153 619 aa19.94■□□□□ 0.78
PTPRA-205ENST00000399903 FAM227BQ96M60 508 aa19.94■□□□□ 0.78
PTPRA-205ENST00000399903 LRRC2Q9BYS8 371 aa19.94■□□□□ 0.78
PTPRA-205ENST00000399903 ARGLU1Q9NWB6 273 aaPredicted RBP19.94■□□□□ 0.78
PTPRA-205ENST00000399903 CCAR1Q8IX12 1150 aaKnown RBP19.93■□□□□ 0.78
PTPRA-205ENST00000399903 ZNF496Q96IT1 587 aaPredicted RBP19.93■□□□□ 0.78
PTPRA-205ENST00000399903 FHOD1Q9Y613 1164 aa19.93■□□□□ 0.78
PTPRA-205ENST00000399903 CCDC191Q8NCU4 936 aa19.93■□□□□ 0.78
PTPRA-205ENST00000399903 SDF4Q9BRK5 362 aa19.93■□□□□ 0.78
PTPRA-205ENST00000399903 KINO60870 393 aaKnown RBP19.92■□□□□ 0.78
PTPRA-205ENST00000399903 PLA2G4AP47712 749 aa19.92■□□□□ 0.78
PTPRA-205ENST00000399903 IRX3P78415 501 aaPredicted RBP19.92■□□□□ 0.78
PTPRA-205ENST00000399903 CCDC73Q6ZRK6 1079 aa19.92■□□□□ 0.78
PTPRA-205ENST00000399903 BRF1Q92994 677 aa19.92■□□□□ 0.78
PTPRA-205ENST00000399903 CHMP4CQ96CF2 233 aa19.92■□□□□ 0.78
PTPRA-205ENST00000399903 STRN4Q9NRL3 753 aa19.92■□□□□ 0.78
PTPRA-205ENST00000399903 CREB3L3Q68CJ9 461 aa19.92■□□□□ 0.78
PTPRA-205ENST00000399903 KIF1BPQ96EK5 621 aa19.92■□□□□ 0.78
PTPRA-205ENST00000399903 ZNF790Q6PG37 636 aa19.92■□□□□ 0.78
PTPRA-205ENST00000399903 ZSWIM6Q9HCJ5 1215 aa19.92■□□□□ 0.78
PTPRA-205ENST00000399903 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.92■□□□□ 0.78
PTPRA-205ENST00000399903 TAF6LQ9Y6J9 622 aa19.92■□□□□ 0.78
PTPRA-205ENST00000399903 NEMFO60524 1076 aa19.91■□□□□ 0.78
PTPRA-205ENST00000399903 IFIT2P09913 472 aaKnown RBP19.91■□□□□ 0.78
PTPRA-205ENST00000399903 STX1AQ16623 288 aa19.91■□□□□ 0.78
PTPRA-205ENST00000399903 SKIDA1Q1XH10 827 aa19.91■□□□□ 0.78
PTPRA-205ENST00000399903 RIC3Q7Z5B4 369 aa19.91■□□□□ 0.78
PTPRA-205ENST00000399903 SMARCE1Q969G3 411 aa19.91■□□□□ 0.78
PTPRA-205ENST00000399903 CCDC9Q9Y3X0 531 aaKnown RBP19.91■□□□□ 0.78
PTPRA-205ENST00000399903 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.91■□□□□ 0.78
PTPRA-205ENST00000399903 CYP27B1O15528 508 aa19.91■□□□□ 0.78
PTPRA-205ENST00000399903 TPM4P67936 248 aa19.91■□□□□ 0.78
PTPRA-205ENST00000399903 SFPQP23246 707 aaKnown RBP eCLIP19.91■□□□□ 0.78
PTPRA-205ENST00000399903 ME1P48163 572 aa19.91■□□□□ 0.78
PTPRA-205ENST00000399903 LMAN1P49257 510 aa19.91■□□□□ 0.78
PTPRA-205ENST00000399903 IQCB1Q15051 598 aa19.91■□□□□ 0.78
PTPRA-205ENST00000399903 SSH3Q8TE77 659 aa19.91■□□□□ 0.78
PTPRA-205ENST00000399903 BABAM1Q9NWV8 329 aa19.91■□□□□ 0.78
PTPRA-205ENST00000399903 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.9■□□□□ 0.786e-7■■■□□ 15.6
PTPRA-205ENST00000399903 ZNF142P52746 1687 aaPredicted RBP19.9■□□□□ 0.78
PTPRA-205ENST00000399903 PPP1R13BQ96KQ4 1090 aa19.9■□□□□ 0.78
PTPRA-205ENST00000399903 CARD6Q9BX69 1037 aa19.9■□□□□ 0.78
PTPRA-205ENST00000399903 NRDCO43847 1150 aa19.89■□□□□ 0.78
PTPRA-205ENST00000399903 PHKG2P15735 406 aa19.89■□□□□ 0.78
PTPRA-205ENST00000399903 CLASRPQ8N2M8 674 aaKnown RBP19.89■□□□□ 0.78
PTPRA-205ENST00000399903 XAGE3Q8WTP9 111 aa19.89■□□□□ 0.78
PTPRA-205ENST00000399903 ZSWIM4Q9H7M6 989 aa19.89■□□□□ 0.78
PTPRA-205ENST00000399903 IFNKQ9P0W0 207 aa19.89■□□□□ 0.78
PTPRA-205ENST00000399903 RGPD5Q99666 1765 aa19.89■□□□□ 0.77
PTPRA-205ENST00000399903 ATP5J2-PTCD1G3V325 749 aa19.89■□□□□ 0.77
PTPRA-205ENST00000399903 TULP2O00295 520 aa19.89■□□□□ 0.77
PTPRA-205ENST00000399903 PTCD1O75127 700 aaKnown RBP19.89■□□□□ 0.77
PTPRA-205ENST00000399903 OAS2P29728 719 aaKnown RBP19.89■□□□□ 0.77
PTPRA-205ENST00000399903 COPS6Q7L5N1 327 aa19.89■□□□□ 0.77
PTPRA-205ENST00000399903 MRFAP1L1Q96HT8 127 aa19.89■□□□□ 0.77
PTPRA-205ENST00000399903 PRDM11Q9NQV5 511 aa19.89■□□□□ 0.77
PTPRA-205ENST00000399903 CADPS2Q86UW7 1296 aa19.89■□□□□ 0.77
PTPRA-205ENST00000399903 CEP57L1Q8IYX8 460 aa19.89■□□□□ 0.77
PTPRA-205ENST00000399903 ZNF330Q9Y3S2 320 aaPredicted RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms