RNA–Protein interactions for RNA: ENST00000399516.7

LAMA3-203, Transcript of laminin subunit alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA3, Length 9,834 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-203ENST00000399516 CCDC97Q96F63 343 aaPredicted RBP12.82□□□□□ -0.36
LAMA3-203ENST00000399516 CTTNBP2Q8WZ74 1663 aa12.82□□□□□ -0.36
LAMA3-203ENST00000399516 ZPR1O75312 459 aa12.81□□□□□ -0.36
LAMA3-203ENST00000399516 TSNARE1Q96NA8 513 aa12.81□□□□□ -0.36
LAMA3-203ENST00000399516 LRRC2Q9BYS8 371 aa12.81□□□□□ -0.36
LAMA3-203ENST00000399516 IQCGQ9H095 443 aaKnown RBP12.81□□□□□ -0.36
LAMA3-203ENST00000399516 BIVM-ERCC5R4GMW8 1640 aa12.81□□□□□ -0.36
LAMA3-203ENST00000399516 FERP16591 822 aa12.81□□□□□ -0.36
LAMA3-203ENST00000399516 PRPHP41219 470 aa12.81□□□□□ -0.36
LAMA3-203ENST00000399516 WTAPQ15007 396 aa12.81□□□□□ -0.36
LAMA3-203ENST00000399516 EBAG9O00559 213 aa12.81□□□□□ -0.36
LAMA3-203ENST00000399516 KRT86O43790 486 aa12.81□□□□□ -0.36
LAMA3-203ENST00000399516 MARCKSP29966 332 aaPredicted RBP12.81□□□□□ -0.36
LAMA3-203ENST00000399516 ZC3H6P61129 1189 aaKnown RBP12.81□□□□□ -0.36
LAMA3-203ENST00000399516 CCDC6Q16204 474 aa12.81□□□□□ -0.36
LAMA3-203ENST00000399516 SREK1Q8WXA9 508 aaKnown RBP12.81□□□□□ -0.36
LAMA3-203ENST00000399516 FEZ1Q99689 392 aa12.81□□□□□ -0.36
LAMA3-203ENST00000399516 ALG1Q9BT22 464 aa12.81□□□□□ -0.36
LAMA3-203ENST00000399516 ADGRF5Q8IZF2 1346 aa12.81□□□□□ -0.36
LAMA3-203ENST00000399516 RBM8AQ9Y5S9 174 aaKnown RBP12.81□□□□□ -0.36
LAMA3-203ENST00000399516 KRT83P78385 493 aa12.8□□□□□ -0.36
LAMA3-203ENST00000399516 SPAG5Q96R06 1193 aa12.8□□□□□ -0.36
LAMA3-203ENST00000399516 KRT13P13646 458 aa12.8□□□□□ -0.36
LAMA3-203ENST00000399516 ANKLE2Q86XL3 938 aa12.8□□□□□ -0.36
LAMA3-203ENST00000399516 PAIP2Q9BPZ3 127 aaKnown RBP12.8□□□□□ -0.36
LAMA3-203ENST00000399516 SNRKQ9NRH2 765 aa12.8□□□□□ -0.36
LAMA3-203ENST00000399516 CEP57Q86XR8 500 aa12.8□□□□□ -0.36
LAMA3-203ENST00000399516 FAM76AQ8TAV0 307 aa12.8□□□□□ -0.36
LAMA3-203ENST00000399516 PPP1R1BQ9UD71 204 aaPredicted RBP12.8□□□□□ -0.36
LAMA3-203ENST00000399516 WASLO00401 505 aaPredicted RBP12.8□□□□□ -0.36
LAMA3-203ENST00000399516 ZBTB43O43298 467 aa12.8□□□□□ -0.36
LAMA3-203ENST00000399516 RAPGEF3O95398 923 aa12.8□□□□□ -0.36
LAMA3-203ENST00000399516 ACTN2P35609 894 aa12.8□□□□□ -0.36
LAMA3-203ENST00000399516 MXRA7P84157 204 aa12.8□□□□□ -0.36
LAMA3-203ENST00000399516 DDX46Q7L014 1031 aaKnown RBP12.8□□□□□ -0.36
LAMA3-203ENST00000399516 SMAP1Q8IYB5 467 aaPredicted RBP12.8□□□□□ -0.36
LAMA3-203ENST00000399516 IRX3P78415 501 aaPredicted RBP12.8□□□□□ -0.36
LAMA3-203ENST00000399516 GTF3C6Q969F1 213 aa12.8□□□□□ -0.36
LAMA3-203ENST00000399516 SPTLC2O15270 562 aa12.8□□□□□ -0.36
LAMA3-203ENST00000399516 CNNM2Q9H8M5 875 aa12.8□□□□□ -0.36
LAMA3-203ENST00000399516 HDXQ7Z353 690 aa12.79□□□□□ -0.36
LAMA3-203ENST00000399516 TCEANC2Q96MN5 208 aa12.79□□□□□ -0.36
LAMA3-203ENST00000399516 LMOD1P29536 600 aaPredicted RBP12.79□□□□□ -0.36
LAMA3-203ENST00000399516 UBXN1Q04323 297 aa12.79□□□□□ -0.36
LAMA3-203ENST00000399516 RTN1Q16799 776 aa12.79□□□□□ -0.36
LAMA3-203ENST00000399516 PUF60Q9UHX1 559 aaKnown RBP12.79□□□□□ -0.36
LAMA3-203ENST00000399516 PI4KAP2A4QPH2 592 aa12.79□□□□□ -0.36
LAMA3-203ENST00000399516 PI4KAP1Q8N8J0 262 aa12.79□□□□□ -0.36
LAMA3-203ENST00000399516 TSPY2A6NKD2 308 aa12.79□□□□□ -0.36
LAMA3-203ENST00000399516 PSMA7O14818 248 aa12.79□□□□□ -0.36
LAMA3-203ENST00000399516 ASIC1P78348 528 aa12.79□□□□□ -0.36
LAMA3-203ENST00000399516 SELENOSQ9BQE4 189 aa12.79□□□□□ -0.36
LAMA3-203ENST00000399516 RHOXF2BP0C7M4 288 aa12.79□□□□□ -0.36
LAMA3-203ENST00000399516 ANKRD44Q8N8A2 993 aa12.79□□□□□ -0.36
LAMA3-203ENST00000399516 RHOXF2Q9BQY4 288 aa12.79□□□□□ -0.36
LAMA3-203ENST00000399516 GUCA1BQ9UMX6 200 aa12.79□□□□□ -0.36
LAMA3-203ENST00000399516 FERMT1Q9BQL6 677 aa12.79□□□□□ -0.36
LAMA3-203ENST00000399516 ANKRD24Q8TF21 1146 aa12.79□□□□□ -0.36
LAMA3-203ENST00000399516 LZTFL1Q9NQ48 299 aa12.79□□□□□ -0.36
LAMA3-203ENST00000399516 MEIS3Q99687 375 aa12.79□□□□□ -0.36
LAMA3-203ENST00000399516 ZMYM4Q5VZL5 1548 aa12.78□□□□□ -0.36
LAMA3-203ENST00000399516 TTC41PQ6P2S7 1318 aa12.78□□□□□ -0.36
LAMA3-203ENST00000399516 NUP160Q12769 1436 aa12.78□□□□□ -0.36
LAMA3-203ENST00000399516 TSGA10Q9BZW7 698 aa12.78□□□□□ -0.36
LAMA3-203ENST00000399516 RTL9Q8NET4 1388 aa12.78□□□□□ -0.36
LAMA3-203ENST00000399516 NPHP3Q7Z494 1330 aa12.78□□□□□ -0.36
LAMA3-203ENST00000399516 NMIQ13287 307 aaPredicted RBP12.78□□□□□ -0.36
LAMA3-203ENST00000399516 ZBTB3Q9H5J0 574 aa12.78□□□□□ -0.36
LAMA3-203ENST00000399516 MMRN2Q9H8L6 949 aa12.78□□□□□ -0.36
LAMA3-203ENST00000399516 PLB1Q6P1J6 1458 aa12.78□□□□□ -0.36
LAMA3-203ENST00000399516 SERPINA10Q9UK55 444 aa12.78□□□□□ -0.36
LAMA3-203ENST00000399516 PHACTR2O75167 634 aa12.78□□□□□ -0.36
LAMA3-203ENST00000399516 CCDC77Q9BR77 488 aa12.78□□□□□ -0.36
LAMA3-203ENST00000399516 RASSF4Q9H2L5 321 aa12.78□□□□□ -0.36
LAMA3-203ENST00000399516 SYT10Q6XYQ8 523 aa12.78□□□□□ -0.36
LAMA3-203ENST00000399516 ZFYP08048 801 aaPredicted RBP12.77□□□□□ -0.36
LAMA3-203ENST00000399516 LMBR1Q8WVP7 490 aa12.77□□□□□ -0.36
LAMA3-203ENST00000399516 IFNKQ9P0W0 207 aa12.77□□□□□ -0.36
LAMA3-203ENST00000399516 CHPF2Q9P2E5 772 aa12.77□□□□□ -0.36
LAMA3-203ENST00000399516 KARSQ15046 597 aaKnown RBP12.77□□□□□ -0.36
LAMA3-203ENST00000399516 MCMDC2Q4G0Z9 681 aa12.77□□□□□ -0.36
LAMA3-203ENST00000399516 INTS4Q96HW7 963 aaKnown RBP12.77□□□□□ -0.36
LAMA3-203ENST00000399516 CCDC174Q6PII3 467 aa12.77□□□□□ -0.37
LAMA3-203ENST00000399516 COMMD10Q9Y6G5 202 aa12.77□□□□□ -0.37
LAMA3-203ENST00000399516 ZGPATQ8N5A5 531 aaKnown RBP12.77□□□□□ -0.37
LAMA3-203ENST00000399516 RPGRQ92834 1020 aaKnown RBP12.77□□□□□ -0.37
LAMA3-203ENST00000399516 SAMD15Q9P1V8 674 aa12.77□□□□□ -0.37
LAMA3-203ENST00000399516 BICDL2A1A5D9 508 aa12.77□□□□□ -0.37
LAMA3-203ENST00000399516 NUTM2BA6NNL0 878 aaPredicted RBP12.77□□□□□ -0.37
LAMA3-203ENST00000399516 NUTM2EB1AL46 878 aaPredicted RBP12.77□□□□□ -0.37
LAMA3-203ENST00000399516 KIF5AQ12840 1032 aa12.77□□□□□ -0.37
LAMA3-203ENST00000399516 NUTM2AQ8IVF1 878 aaPredicted RBP12.77□□□□□ -0.37
LAMA3-203ENST00000399516 MRPL50Q8N5N7 158 aaKnown RBP12.77□□□□□ -0.37
LAMA3-203ENST00000399516 RAPGEF6Q8TEU7 1601 aa12.77□□□□□ -0.37
LAMA3-203ENST00000399516 BICD1Q96G01 975 aa12.77□□□□□ -0.37
LAMA3-203ENST00000399516 CRNKL1Q9BZJ0 848 aaKnown RBP12.77□□□□□ -0.37
LAMA3-203ENST00000399516 MSH6P52701 1360 aa12.76□□□□□ -0.37
LAMA3-203ENST00000399516 AK2P54819 239 aa12.76□□□□□ -0.37
LAMA3-203ENST00000399516 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.76□□□□□ -0.37
LAMA3-203ENST00000399516 DNAJC21Q5F1R6 531 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms