RNA–Protein interactions for RNA: ENST00000399273.5

CCDC144A-206, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC144A, Length 8,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-206ENST00000399273 CCDC102BQ68D86 513 aa13.21□□□□□ -0.3
CCDC144A-206ENST00000399273 MAK16Q9BXY0 300 aaKnown RBP13.21□□□□□ -0.3
CCDC144A-206ENST00000399273 ZSCAN16Q9H4T2 348 aaPredicted RBP13.21□□□□□ -0.3
CCDC144A-206ENST00000399273 HAUS2Q9NVX0 235 aa13.21□□□□□ -0.3
CCDC144A-206ENST00000399273 RNF187Q5TA31 235 aaPredicted RBP13.21□□□□□ -0.3
CCDC144A-206ENST00000399273 ATP5J2-PTCD1G3V325 749 aa13.2□□□□□ -0.3
CCDC144A-206ENST00000399273 RRP36Q96EU6 259 aaKnown RBP13.2□□□□□ -0.3
CCDC144A-206ENST00000399273 EYA3Q99504 573 aa13.2□□□□□ -0.3
CCDC144A-206ENST00000399273 ECHDC1Q9NTX5 307 aa13.2□□□□□ -0.3
CCDC144A-206ENST00000399273 NOD1Q9Y239 953 aa13.2□□□□□ -0.3
CCDC144A-206ENST00000399273 ACSBG1Q96GR2 724 aa13.2□□□□□ -0.3
CCDC144A-206ENST00000399273 FANCAO15360 1455 aa13.2□□□□□ -0.3
CCDC144A-206ENST00000399273 SLC8A3P57103 927 aa13.2□□□□□ -0.3
CCDC144A-206ENST00000399273 SPAG5Q96R06 1193 aa13.2□□□□□ -0.3
CCDC144A-206ENST00000399273 STMN4Q9H169 189 aaPredicted RBP13.2□□□□□ -0.3
CCDC144A-206ENST00000399273 ABCC5O15440 1437 aa13.2□□□□□ -0.3
CCDC144A-206ENST00000399273 FAM13AO94988 1023 aa13.2□□□□□ -0.3
CCDC144A-206ENST00000399273 THUMPD2Q9BTF0 503 aaKnown RBP13.2□□□□□ -0.3
CCDC144A-206ENST00000399273 HSF2BPO75031 334 aa13.2□□□□□ -0.3
CCDC144A-206ENST00000399273 NME9Q86XW9 330 aa13.2□□□□□ -0.3
CCDC144A-206ENST00000399273 NEK1Q96PY6 1258 aa13.2□□□□□ -0.3
CCDC144A-206ENST00000399273 UNC13AQ9UPW8 1703 aa13.2□□□□□ -0.3
CCDC144A-206ENST00000399273 GNAT2P19087 354 aa13.2□□□□□ -0.3
CCDC144A-206ENST00000399273 HAND2P61296 217 aa13.2□□□□□ -0.3
CCDC144A-206ENST00000399273 DDB1Q16531 1140 aa13.2□□□□□ -0.3
CCDC144A-206ENST00000399273 RTL9Q8NET4 1388 aa13.2□□□□□ -0.3
CCDC144A-206ENST00000399273 ZBTB43O43298 467 aa13.19□□□□□ -0.3
CCDC144A-206ENST00000399273 SH2D4AQ9H788 454 aa13.19□□□□□ -0.3
CCDC144A-206ENST00000399273 SLC4A4Q9Y6R1 1079 aa13.19□□□□□ -0.3
CCDC144A-206ENST00000399273 CAVIN2O95810 425 aa13.19□□□□□ -0.3
CCDC144A-206ENST00000399273 FMNL3Q8IVF7 1028 aa13.19□□□□□ -0.3
CCDC144A-206ENST00000399273 PSMC4P43686 418 aa13.19□□□□□ -0.3
CCDC144A-206ENST00000399273 RBM27Q9P2N5 1060 aaKnown RBP13.19□□□□□ -0.3
CCDC144A-206ENST00000399273 NCOA1Q15788 1441 aa13.19□□□□□ -0.3
CCDC144A-206ENST00000399273 F6X3S4 739 aa13.19□□□□□ -0.3
CCDC144A-206ENST00000399273 ANKRD13DQ6ZTN6 518 aa13.19□□□□□ -0.3
CCDC144A-206ENST00000399273 SMC1BQ8NDV3 1235 aa13.19□□□□□ -0.3
CCDC144A-206ENST00000399273 ARAP1Q96P48 1450 aa13.19□□□□□ -0.3
CCDC144A-206ENST00000399273 RBM25P49756 843 aaKnown RBP13.19□□□□□ -0.3
CCDC144A-206ENST00000399273 TMC6Q7Z403 805 aa13.19□□□□□ -0.3
CCDC144A-206ENST00000399273 CCDC63Q8NA47 563 aa13.19□□□□□ -0.3
CCDC144A-206ENST00000399273 ORC3Q9UBD5 711 aaPredicted RBP13.19□□□□□ -0.3
CCDC144A-206ENST00000399273 KIAA0586Q9BVV6 1533 aa13.19□□□□□ -0.3
CCDC144A-206ENST00000399273 CALML3P27482 149 aa13.19□□□□□ -0.3
CCDC144A-206ENST00000399273 NSRP1Q9H0G5 558 aaKnown RBP13.19□□□□□ -0.3
CCDC144A-206ENST00000399273 GPHNQ9NQX3 736 aaPredicted RBP13.19□□□□□ -0.3
CCDC144A-206ENST00000399273 NIP7Q9Y221 180 aaKnown RBP eCLIP13.19□□□□□ -0.3
CCDC144A-206ENST00000399273 KMT5BQ4FZB7 885 aa13.19□□□□□ -0.3
CCDC144A-206ENST00000399273 EEF2P13639 858 aaKnown RBP13.18□□□□□ -0.3
CCDC144A-206ENST00000399273 MAGEB6P1A0A0J9YX57 407 aa13.18□□□□□ -0.3
CCDC144A-206ENST00000399273 MXRA7P84157 204 aa13.18□□□□□ -0.3
CCDC144A-206ENST00000399273 ATP2A2P16615 1042 aaKnown RBP13.18□□□□□ -0.3
CCDC144A-206ENST00000399273 GJB2P29033 226 aa13.18□□□□□ -0.3
CCDC144A-206ENST00000399273 TPTE2Q6XPS3 522 aa13.18□□□□□ -0.3
CCDC144A-206ENST00000399273 SLFN5Q08AF3 891 aa13.18□□□□□ -0.3
CCDC144A-206ENST00000399273 CCDC50Q8IVM0 306 aa13.18□□□□□ -0.3
CCDC144A-206ENST00000399273 IL27Q8NEV9 243 aa13.18□□□□□ -0.3
CCDC144A-206ENST00000399273 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.18□□□□□ -0.3
CCDC144A-206ENST00000399273 TMOD4Q9NZQ9 345 aa13.18□□□□□ -0.3
CCDC144A-206ENST00000399273 CYLC1P35663 651 aaPredicted RBP13.18□□□□□ -0.3
CCDC144A-206ENST00000399273 SYKP43405 635 aa13.18□□□□□ -0.3
CCDC144A-206ENST00000399273 BIRC2Q13490 618 aa13.18□□□□□ -0.3
CCDC144A-206ENST00000399273 PAIP2Q9BPZ3 127 aaKnown RBP13.18□□□□□ -0.3
CCDC144A-206ENST00000399273 JAKMIP2Q96AA8 810 aa13.17□□□□□ -0.3
CCDC144A-206ENST00000399273 PRPF31Q8WWY3 499 aaKnown RBP13.17□□□□□ -0.3
CCDC144A-206ENST00000399273 CGNQ9P2M7 1197 aaKnown RBP13.17□□□□□ -0.3
CCDC144A-206ENST00000399273 RBM26Q5T8P6 1007 aaKnown RBP13.17□□□□□ -0.3
CCDC144A-206ENST00000399273 HAUS7Q99871 368 aa13.17□□□□□ -0.3
CCDC144A-206ENST00000399273 ANAPC4Q9UJX5 808 aa13.17□□□□□ -0.3
CCDC144A-206ENST00000399273 N4BP3O15049 544 aa13.17□□□□□ -0.3
CCDC144A-206ENST00000399273 MCM4P33991 863 aa13.17□□□□□ -0.3
CCDC144A-206ENST00000399273 CFAP58Q5T655 872 aa13.17□□□□□ -0.3
CCDC144A-206ENST00000399273 LMBR1Q8WVP7 490 aa13.17□□□□□ -0.3
CCDC144A-206ENST00000399273 SSH1Q8WYL5 1049 aa13.17□□□□□ -0.3
CCDC144A-206ENST00000399273 GOLGA1Q92805 767 aa13.17□□□□□ -0.3
CCDC144A-206ENST00000399273 BIN1O00499 593 aa13.17□□□□□ -0.3
CCDC144A-206ENST00000399273 POLR3GO15318 223 aaPredicted RBP13.17□□□□□ -0.3
CCDC144A-206ENST00000399273 SERPINA10Q9UK55 444 aa13.17□□□□□ -0.3
CCDC144A-206ENST00000399273 RAPGEF6Q8TEU7 1601 aa13.17□□□□□ -0.3
CCDC144A-206ENST00000399273 LPXNO60711 386 aa13.16□□□□□ -0.3
CCDC144A-206ENST00000399273 GMNNO75496 209 aa13.16□□□□□ -0.3
CCDC144A-206ENST00000399273 HOOK2Q96ED9 719 aa13.16□□□□□ -0.3
CCDC144A-206ENST00000399273 BACH2Q9BYV9 841 aa13.16□□□□□ -0.3
CCDC144A-206ENST00000399273 SNRKQ9NRH2 765 aa13.16□□□□□ -0.3
CCDC144A-206ENST00000399273 ZBTB24O43167 697 aaPredicted RBP13.16□□□□□ -0.3
CCDC144A-206ENST00000399273 CCDC77Q9BR77 488 aa13.16□□□□□ -0.3
CCDC144A-206ENST00000399273 PSMA7O14818 248 aa13.16□□□□□ -0.3
CCDC144A-206ENST00000399273 ATP2B3Q16720 1220 aa13.16□□□□□ -0.3
CCDC144A-206ENST00000399273 AKR1B10O60218 316 aa13.16□□□□□ -0.3
CCDC144A-206ENST00000399273 HS2ST1Q7LGA3 356 aa13.16□□□□□ -0.3
CCDC144A-206ENST00000399273 KCNG4Q8TDN1 519 aa13.16□□□□□ -0.3
CCDC144A-206ENST00000399273 RBM17Q96I25 401 aaKnown RBP13.16□□□□□ -0.3
CCDC144A-206ENST00000399273 ANKRD2Q9GZV1 360 aa13.16□□□□□ -0.3
CCDC144A-206ENST00000399273 BACH1O14867 736 aa13.16□□□□□ -0.3
CCDC144A-206ENST00000399273 GTPBP4Q9BZE4 634 aaKnown RBP13.16□□□□□ -0.3
CCDC144A-206ENST00000399273 NOC2LQ9Y3T9 749 aaKnown RBP13.16□□□□□ -0.3
CCDC144A-206ENST00000399273 ANKS4BQ8N8V4 417 aa13.16□□□□□ -0.3
CCDC144A-206ENST00000399273 TNRQ92752 1358 aa13.15□□□□□ -0.3
CCDC144A-206ENST00000399273 TMX1Q9H3N1 280 aa13.15□□□□□ -0.3
CCDC144A-206ENST00000399273 BICDL2A1A5D9 508 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms