RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 TBC1D9BQ66K14 1250 aa18.31■□□□□ 0.52
COL25A1-201ENST00000399126 SCN7AQ01118 1682 aa18.31■□□□□ 0.52
COL25A1-201ENST00000399126 RPS6KA4O75676 772 aa18.3■□□□□ 0.52
COL25A1-201ENST00000399126 PTH1RQ03431 593 aa18.3■□□□□ 0.52
COL25A1-201ENST00000399126 CNNM1Q9NRU3 951 aa18.3■□□□□ 0.52
COL25A1-201ENST00000399126 FOXD4L1Q9NU39 408 aa18.3■□□□□ 0.52
COL25A1-201ENST00000399126 ZNF652Q9Y2D9 606 aa18.3■□□□□ 0.52
COL25A1-201ENST00000399126 SPEF2Q9C093 1822 aa18.3■□□□□ 0.52
COL25A1-201ENST00000399126 RAD50Q92878 1312 aa18.3■□□□□ 0.52
COL25A1-201ENST00000399126 TAF1P21675 1872 aa18.3■□□□□ 0.52
COL25A1-201ENST00000399126 PHF14O94880 888 aa18.3■□□□□ 0.52
COL25A1-201ENST00000399126 METTL24Q5JXM2 366 aa18.3■□□□□ 0.52
COL25A1-201ENST00000399126 C3orf67Q6ZVT6 689 aa18.3■□□□□ 0.52
COL25A1-201ENST00000399126 HAUS7Q99871 368 aa18.3■□□□□ 0.52
COL25A1-201ENST00000399126 SLFNL1Q499Z3 407 aa18.29■□□□□ 0.52
COL25A1-201ENST00000399126 RC3H1Q5TC82 1133 aaKnown RBP18.29■□□□□ 0.52
COL25A1-201ENST00000399126 C4BP0C0L5 1744 aa18.29■□□□□ 0.52
COL25A1-201ENST00000399126 TRIM37O94972 964 aa18.29■□□□□ 0.52
COL25A1-201ENST00000399126 CLEC4GQ6UXB4 293 aa18.29■□□□□ 0.52
COL25A1-201ENST00000399126 KRT27Q7Z3Y8 459 aa18.29■□□□□ 0.52
COL25A1-201ENST00000399126 HELBQ8NG08 1087 aaPredicted RBP18.29■□□□□ 0.52
COL25A1-201ENST00000399126 ERFEQ4G0M1 354 aa18.28■□□□□ 0.52
COL25A1-201ENST00000399126 FAM43AQ8N2R8 423 aa18.28■□□□□ 0.52
COL25A1-201ENST00000399126 XAGE2Q96GT9 111 aa18.28■□□□□ 0.52
COL25A1-201ENST00000399126 ZFP91Q96JP5 570 aaPredicted RBP18.28■□□□□ 0.52
COL25A1-201ENST00000399126 CASZ1Q86V15 1759 aa18.28■□□□□ 0.52
COL25A1-201ENST00000399126 K7ELQ4 463 aaPredicted RBP18.28■□□□□ 0.52
COL25A1-201ENST00000399126 GOLIM4O00461 696 aa18.28■□□□□ 0.52
COL25A1-201ENST00000399126 HMGB1P09429 215 aaKnown RBP18.28■□□□□ 0.52
COL25A1-201ENST00000399126 ARHGEF1Q92888 912 aaKnown RBP18.28■□□□□ 0.52
COL25A1-201ENST00000399126 LAMB2P55268 1798 aa18.28■□□□□ 0.52
COL25A1-201ENST00000399126 SNAP23O00161 211 aa18.27■□□□□ 0.52
COL25A1-201ENST00000399126 HSPA4P34932 840 aa18.27■□□□□ 0.52
COL25A1-201ENST00000399126 ZNF589Q86UQ0 364 aaPredicted RBP18.27■□□□□ 0.52
COL25A1-201ENST00000399126 CCDC24Q8N4L8 307 aa18.27■□□□□ 0.52
COL25A1-201ENST00000399126 VGLL2Q8N8G2 317 aa18.27■□□□□ 0.52
COL25A1-201ENST00000399126 NARFQ9UHQ1 456 aa18.27■□□□□ 0.52
COL25A1-201ENST00000399126 RTCBQ9Y3I0 505 aaKnown RBP18.27■□□□□ 0.52
COL25A1-201ENST00000399126 C4AP0C0L4 1744 aa18.27■□□□□ 0.52
COL25A1-201ENST00000399126 ZBTB22O15209 634 aa18.27■□□□□ 0.52
COL25A1-201ENST00000399126 FAM196AQ6ZSG2 479 aa18.27■□□□□ 0.52
COL25A1-201ENST00000399126 RASEFQ8IZ41 740 aa18.27■□□□□ 0.52
COL25A1-201ENST00000399126 SNRKQ9NRH2 765 aa18.27■□□□□ 0.52
COL25A1-201ENST00000399126 LRP5O75197 1615 aa18.27■□□□□ 0.51
COL25A1-201ENST00000399126 SCARF1Q14162 830 aa18.26■□□□□ 0.51
COL25A1-201ENST00000399126 TMED8Q6PL24 325 aaPredicted RBP18.26■□□□□ 0.51
COL25A1-201ENST00000399126 SEC62Q99442 399 aaKnown RBP18.26■□□□□ 0.51
COL25A1-201ENST00000399126 UPF3BQ9BZI7 483 aaKnown RBP18.26■□□□□ 0.51
COL25A1-201ENST00000399126 MCCP23508 829 aa18.26■□□□□ 0.51
COL25A1-201ENST00000399126 ATP2B3Q16720 1220 aa18.26■□□□□ 0.51
COL25A1-201ENST00000399126 PI16Q6UXB8 463 aa18.26■□□□□ 0.51
COL25A1-201ENST00000399126 RUFY2Q8WXA3 655 aa18.26■□□□□ 0.51
COL25A1-201ENST00000399126 IFIT1P09914 478 aaKnown RBP18.26■□□□□ 0.51
COL25A1-201ENST00000399126 NEK4P51957 841 aa18.26■□□□□ 0.51
COL25A1-201ENST00000399126 KIAA1211Q6ZU35 1233 aa18.26■□□□□ 0.51
COL25A1-201ENST00000399126 ABCC12Q96J65 1359 aa18.25■□□□□ 0.51
COL25A1-201ENST00000399126 AK7Q96M32 723 aa18.25■□□□□ 0.51
COL25A1-201ENST00000399126 PAG1Q9NWQ8 432 aa18.25■□□□□ 0.51
COL25A1-201ENST00000399126 AKAP2Q9Y2D5 859 aa18.25■□□□□ 0.51
COL25A1-201ENST00000399126 ZPR1O75312 459 aa18.25■□□□□ 0.51
COL25A1-201ENST00000399126 GORABQ5T7V8 394 aa18.25■□□□□ 0.51
COL25A1-201ENST00000399126 CCDC129Q6ZRS4 1044 aa18.25■□□□□ 0.51
COL25A1-201ENST00000399126 TAF5LO75529 589 aa18.24■□□□□ 0.51
COL25A1-201ENST00000399126 NFKBIBQ15653 356 aa18.24■□□□□ 0.51
COL25A1-201ENST00000399126 SNX14Q9Y5W7 946 aa18.24■□□□□ 0.51
COL25A1-201ENST00000399126 CCDC171Q6TFL3 1326 aa18.24■□□□□ 0.51
COL25A1-201ENST00000399126 MED23Q9ULK4 1368 aa18.24■□□□□ 0.51
COL25A1-201ENST00000399126 PDE8BO95263 885 aa18.24■□□□□ 0.51
COL25A1-201ENST00000399126 CCDC152Q4G0S7 254 aa18.24■□□□□ 0.51
COL25A1-201ENST00000399126 HIP1O00291 1037 aa18.23■□□□□ 0.51
COL25A1-201ENST00000399126 FKBP4Q02790 459 aaKnown RBP eCLIP18.23■□□□□ 0.51
COL25A1-201ENST00000399126 TTC39AQ5SRH9 613 aa18.23■□□□□ 0.51
COL25A1-201ENST00000399126 KBTBD3Q8NAB2 608 aa18.23■□□□□ 0.51
COL25A1-201ENST00000399126 PRDM10Q9NQV6 1147 aa18.23■□□□□ 0.51
COL25A1-201ENST00000399126 ANAPC15P60006 121 aa18.23■□□□□ 0.51
COL25A1-201ENST00000399126 PRPF40BQ6NWY9 871 aaKnown RBP18.23■□□□□ 0.51
COL25A1-201ENST00000399126 NOL8Q76FK4 1167 aaKnown RBP18.23■□□□□ 0.51
COL25A1-201ENST00000399126 ZNF592Q92610 1267 aa18.23■□□□□ 0.51
COL25A1-201ENST00000399126 AKAP11Q9UKA4 1901 aa18.22■□□□□ 0.51
COL25A1-201ENST00000399126 CCDC158Q5M9N0 1113 aa18.22■□□□□ 0.51
COL25A1-201ENST00000399126 ST18O60284 1047 aa18.22■□□□□ 0.51
COL25A1-201ENST00000399126 FRAT2O75474 233 aaPredicted RBP18.22■□□□□ 0.51
COL25A1-201ENST00000399126 SETDB2Q96T68 719 aa18.22■□□□□ 0.51
COL25A1-201ENST00000399126 MPHOSPH8Q99549 860 aa18.22■□□□□ 0.51
COL25A1-201ENST00000399126 COL24A1Q17RW2 1714 aa18.21■□□□□ 0.51
COL25A1-201ENST00000399126 RRP9O43818 475 aaKnown RBP18.21■□□□□ 0.51
COL25A1-201ENST00000399126 CPA1P15085 419 aa18.21■□□□□ 0.51
COL25A1-201ENST00000399126 GTF2E1P29083 439 aaPredicted RBP18.21■□□□□ 0.51
COL25A1-201ENST00000399126 DDIT3P35638 169 aa18.21■□□□□ 0.51
COL25A1-201ENST00000399126 UBR3Q6ZT12 1888 aa18.21■□□□□ 0.51
COL25A1-201ENST00000399126 HSP90AA1P07900 732 aaKnown RBP18.21■□□□□ 0.51
COL25A1-201ENST00000399126 RFC4P35249 363 aa18.21■□□□□ 0.51
COL25A1-201ENST00000399126 COL9A3Q14050 684 aaPredicted RBP18.21■□□□□ 0.51
COL25A1-201ENST00000399126 TRAPPC3LQ5T215 181 aa18.21■□□□□ 0.51
COL25A1-201ENST00000399126 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.21■□□□□ 0.51
COL25A1-201ENST00000399126 RBM8AQ9Y5S9 174 aaKnown RBP18.21■□□□□ 0.51
COL25A1-201ENST00000399126 TAF6LQ9Y6J9 622 aa18.21■□□□□ 0.51
COL25A1-201ENST00000399126 GOLGB1Q14789 3259 aaKnown RBP18.21■□□□□ 0.51
COL25A1-201ENST00000399126 MYO5AQ9Y4I1 1855 aaKnown RBP18.21■□□□□ 0.5
COL25A1-201ENST00000399126 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms