RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 TNS3Q68CZ2 1445 aa15.48■□□□□ 0.07
PRAME-201ENST00000398741 LMBR1LQ6UX01 489 aa15.48■□□□□ 0.07
PRAME-201ENST00000398741 PLBD2Q8NHP8 589 aa15.48■□□□□ 0.07
PRAME-201ENST00000398741 BRF1Q92994 677 aa15.48■□□□□ 0.07
PRAME-201ENST00000398741 MRVI1Q9Y6F6 885 aa15.48■□□□□ 0.07
PRAME-201ENST00000398741 CYP27B1O15528 508 aa15.48■□□□□ 0.07
PRAME-201ENST00000398741 AP5Z1O43299 807 aa15.48■□□□□ 0.07
PRAME-201ENST00000398741 CYP21A2P08686 494 aa15.48■□□□□ 0.07
PRAME-201ENST00000398741 CKAP2LQ8IYA6 745 aa15.48■□□□□ 0.07
PRAME-201ENST00000398741 KBTBD3Q8NAB2 608 aa15.48■□□□□ 0.07
PRAME-201ENST00000398741 SPC24Q8NBT2 197 aa15.48■□□□□ 0.07
PRAME-201ENST00000398741 PRIMPOLQ96LW4 560 aa15.48■□□□□ 0.07
PRAME-201ENST00000398741 SPATA31A3Q5VYP0 1347 aa15.47■□□□□ 0.07
PRAME-201ENST00000398741 HMGN5P82970 282 aaKnown RBP15.47■□□□□ 0.07
PRAME-201ENST00000398741 C17orf53Q8N3J3 647 aaPredicted RBP15.47■□□□□ 0.07
PRAME-201ENST00000398741 NEUROD6Q96NK8 337 aa15.47■□□□□ 0.07
PRAME-201ENST00000398741 NHSL1Q5SYE7 1610 aa15.47■□□□□ 0.07
PRAME-201ENST00000398741 CHGBP05060 677 aa15.47■□□□□ 0.07
PRAME-201ENST00000398741 HMGB1P09429 215 aaKnown RBP15.47■□□□□ 0.07
PRAME-201ENST00000398741 MTERF4Q7Z6M4 381 aaKnown RBP15.47■□□□□ 0.07
PRAME-201ENST00000398741 MYRIPQ8NFW9 859 aa15.47■□□□□ 0.07
PRAME-201ENST00000398741 DDX11Q96FC9 970 aa15.47■□□□□ 0.07
PRAME-201ENST00000398741 CLSTN2Q9H4D0 955 aa15.47■□□□□ 0.07
PRAME-201ENST00000398741 ZSCAN16Q9H4T2 348 aaPredicted RBP15.47■□□□□ 0.07
PRAME-201ENST00000398741 SPTLC3Q9NUV7 552 aa15.47■□□□□ 0.07
PRAME-201ENST00000398741 SOS2Q07890 1332 aaPredicted RBP15.46■□□□□ 0.07
PRAME-201ENST00000398741 SH3TC1Q8TE82 1336 aa15.46■□□□□ 0.07
PRAME-201ENST00000398741 RESTQ13127 1097 aa15.46■□□□□ 0.07
PRAME-201ENST00000398741 ANO6Q4KMQ2 910 aa15.46■□□□□ 0.07
PRAME-201ENST00000398741 GOLIM4O00461 696 aa15.45■□□□□ 0.06
PRAME-201ENST00000398741 CASP7P55210 303 aa15.45■□□□□ 0.06
PRAME-201ENST00000398741 CHRNA2Q15822 529 aa15.45■□□□□ 0.06
PRAME-201ENST00000398741 LUZP1Q86V48 1076 aa15.45■□□□□ 0.06
PRAME-201ENST00000398741 LRRC2Q9BYS8 371 aa15.45■□□□□ 0.06
PRAME-201ENST00000398741 CFAP45Q9UL16 551 aa15.45■□□□□ 0.06
PRAME-201ENST00000398741 PLEKHG2Q9H7P9 1386 aa15.45■□□□□ 0.06
PRAME-201ENST00000398741 ABCC6O95255 1503 aa15.45■□□□□ 0.06
PRAME-201ENST00000398741 SCRN1Q12765 414 aa15.45■□□□□ 0.06
PRAME-201ENST00000398741 LLPHQ9BRT6 129 aaKnown RBP15.45■□□□□ 0.06
PRAME-201ENST00000398741 HELLSQ9NRZ9 838 aa15.45■□□□□ 0.06
PRAME-201ENST00000398741 PAG1Q9NWQ8 432 aa15.45■□□□□ 0.06
PRAME-201ENST00000398741 VSIG10Q8N0Z9 540 aa15.44■□□□□ 0.06
PRAME-201ENST00000398741 CABLES1Q8TDN4 633 aa15.44■□□□□ 0.06
PRAME-201ENST00000398741 CBX8Q9HC52 389 aa15.44■□□□□ 0.06
PRAME-201ENST00000398741 KIF3AQ9Y496 699 aa15.44■□□□□ 0.06
PRAME-201ENST00000398741 PFKFB2O60825 505 aa15.44■□□□□ 0.06
PRAME-201ENST00000398741 NR1I2O75469 434 aa15.44■□□□□ 0.06
PRAME-201ENST00000398741 DHX32Q7L7V1 743 aaKnown RBP15.44■□□□□ 0.06
PRAME-201ENST00000398741 PGBD1Q96JS3 809 aa15.44■□□□□ 0.06
PRAME-201ENST00000398741 KCNF1Q9H3M0 494 aa15.44■□□□□ 0.06
PRAME-201ENST00000398741 CWC25Q9NXE8 425 aaPredicted RBP15.44■□□□□ 0.06
PRAME-201ENST00000398741 PALLDQ8WX93 1383 aa15.44■□□□□ 0.06
PRAME-201ENST00000398741 AFDNP55196 1824 aaKnown RBP15.43■□□□□ 0.06
PRAME-201ENST00000398741 FOXO4P98177 505 aa15.43■□□□□ 0.06
PRAME-201ENST00000398741 RBM43Q6ZSC3 357 aaKnown RBP15.43■□□□□ 0.06
PRAME-201ENST00000398741 STOX1Q6ZVD7 989 aa15.43■□□□□ 0.06
PRAME-201ENST00000398741 KIAA1524Q8TCG1 905 aa15.43■□□□□ 0.06
PRAME-201ENST00000398741 DSCC1Q9BVC3 393 aa15.43■□□□□ 0.06
PRAME-201ENST00000398741 ROBO1Q9Y6N7 1651 aa15.43■□□□□ 0.06
PRAME-201ENST00000398741 H7C1W4 665 aa15.43■□□□□ 0.06
PRAME-201ENST00000398741 IL15P40933 162 aaPredicted RBP15.43■□□□□ 0.06
PRAME-201ENST00000398741 DRC7Q8IY82 874 aa15.43■□□□□ 0.06
PRAME-201ENST00000398741 SMARCC2Q8TAQ2 1214 aa15.43■□□□□ 0.06
PRAME-201ENST00000398741 GPR108Q9NPR9 543 aa15.43■□□□□ 0.06
PRAME-201ENST00000398741 PYCARDQ9ULZ3 195 aa15.43■□□□□ 0.06
PRAME-201ENST00000398741 ARFGEF2Q9Y6D5 1785 aa15.42■□□□□ 0.06
PRAME-201ENST00000398741 CHAF1AQ13111 956 aaPredicted RBP15.42■□□□□ 0.06
PRAME-201ENST00000398741 ATG9AQ7Z3C6 839 aa15.42■□□□□ 0.06
PRAME-201ENST00000398741 NAP1L2Q9ULW6 460 aaPredicted RBP15.42■□□□□ 0.06
PRAME-201ENST00000398741 FOSBP53539 338 aa15.41■□□□□ 0.06
PRAME-201ENST00000398741 TIMM10P62072 90 aa15.41■□□□□ 0.06
PRAME-201ENST00000398741 CEBPZQ03701 1054 aaKnown RBP15.41■□□□□ 0.06
PRAME-201ENST00000398741 APOBRQ0VD83 1088 aa15.41■□□□□ 0.06
PRAME-201ENST00000398741 NAA16Q6N069 864 aaPredicted RBP15.41■□□□□ 0.06
PRAME-201ENST00000398741 TRIM5Q9C035 493 aa15.41■□□□□ 0.06
PRAME-201ENST00000398741 PTPDC1A2A3K4 754 aa15.41■□□□□ 0.06
PRAME-201ENST00000398741 ZNF165P49910 485 aa15.41■□□□□ 0.06
PRAME-201ENST00000398741 ZMYM1Q5SVZ6 1142 aa15.41■□□□□ 0.06
PRAME-201ENST00000398741 NSUN7Q8NE18 718 aaKnown RBP15.41■□□□□ 0.06
PRAME-201ENST00000398741 COL18A1P39060 1754 aa15.41■□□□□ 0.06
PRAME-201ENST00000398741 NBPF26B4DH59 902 aa15.4■□□□□ 0.06
PRAME-201ENST00000398741 IFIT1P09914 478 aaKnown RBP15.4■□□□□ 0.06
PRAME-201ENST00000398741 PTGS1P23219 599 aa15.4■□□□□ 0.06
PRAME-201ENST00000398741 NBPF14Q5TI25 921 aa15.4■□□□□ 0.06
PRAME-201ENST00000398741 NBPF10Q6P3W6 841 aaKnown RBP15.4■□□□□ 0.06
PRAME-201ENST00000398741 TTLL7Q6ZT98 887 aa15.4■□□□□ 0.06
PRAME-201ENST00000398741 TICAM2Q86XR7 235 aa15.4■□□□□ 0.06
PRAME-201ENST00000398741 NBPF15Q8N660 670 aa15.4■□□□□ 0.06
PRAME-201ENST00000398741 TDRD7Q8NHU6 1098 aaKnown RBP15.4■□□□□ 0.06
PRAME-201ENST00000398741 DNAJC25Q9H1X3 360 aa15.4■□□□□ 0.06
PRAME-201ENST00000398741 CAVIN2O95810 425 aa15.4■□□□□ 0.06
PRAME-201ENST00000398741 CCT2P78371 535 aaKnown RBP15.4■□□□□ 0.06
PRAME-201ENST00000398741 SLFNL1Q499Z3 407 aa15.4■□□□□ 0.06
PRAME-201ENST00000398741 E7EWF7 191 aa15.39■□□□□ 0.05
PRAME-201ENST00000398741 EYA2O00167 538 aa15.39■□□□□ 0.05
PRAME-201ENST00000398741 HSPD1P10809 573 aaKnown RBP15.39■□□□□ 0.05
PRAME-201ENST00000398741 GTF2F1P35269 517 aaKnown RBP eCLIP15.39■□□□□ 0.052e-7■■■■□ 20.3
PRAME-201ENST00000398741 ZNF75DP51815 510 aa15.39■□□□□ 0.05
PRAME-201ENST00000398741 CHMP4CQ96CF2 233 aa15.39■□□□□ 0.05
PRAME-201ENST00000398741 ZNF396Q96N95 335 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms