RNA–Protein interactions for RNA: ENST00000398652.7

FAM3B-204, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 1 (best) BASIC

Gene FAM3B, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-204ENST00000398652 ABCB7O75027 752 aa18.25■□□□□ 0.51
FAM3B-204ENST00000398652 TBC1D8O95759 1140 aa18.24■□□□□ 0.51
FAM3B-204ENST00000398652 NOM1Q5C9Z4 860 aaKnown RBP18.24■□□□□ 0.51
FAM3B-204ENST00000398652 LRP10Q7Z4F1 713 aa18.24■□□□□ 0.51
FAM3B-204ENST00000398652 ASTN2O75129 1339 aaPredicted RBP18.23■□□□□ 0.51
FAM3B-204ENST00000398652 SH3TC1Q8TE82 1336 aa18.23■□□□□ 0.51
FAM3B-204ENST00000398652 RIMBP2O15034 1052 aa18.23■□□□□ 0.51
FAM3B-204ENST00000398652 ECE2O60344 883 aa18.23■□□□□ 0.51
FAM3B-204ENST00000398652 HSP90AB3PQ58FF7 597 aa18.23■□□□□ 0.51
FAM3B-204ENST00000398652 NLRP10Q86W26 655 aa18.23■□□□□ 0.51
FAM3B-204ENST00000398652 NSFL1CQ9UNZ2 370 aaKnown RBP18.23■□□□□ 0.51
FAM3B-204ENST00000398652 GPR25O00155 361 aa18.22■□□□□ 0.51
FAM3B-204ENST00000398652 CACNB1Q02641 598 aaPredicted RBP18.22■□□□□ 0.51
FAM3B-204ENST00000398652 THUMPD2Q9BTF0 503 aaKnown RBP18.22■□□□□ 0.51
FAM3B-204ENST00000398652 KCNQ5Q9NR82 932 aa18.22■□□□□ 0.51
FAM3B-204ENST00000398652 ZNF609O15014 1411 aa18.22■□□□□ 0.51
FAM3B-204ENST00000398652 KIAA0100Q14667 2235 aaKnown RBP18.21■□□□□ 0.51
FAM3B-204ENST00000398652 C6orf229H3BNL8 230 aa18.21■□□□□ 0.51
FAM3B-204ENST00000398652 TRIM26Q12899 539 aaPredicted RBP18.21■□□□□ 0.51
FAM3B-204ENST00000398652 PDIA6Q15084 440 aa18.21■□□□□ 0.51
FAM3B-204ENST00000398652 ANGEL2Q5VTE6 544 aaKnown RBP18.21■□□□□ 0.51
FAM3B-204ENST00000398652 EYA3Q99504 573 aa18.21■□□□□ 0.51
FAM3B-204ENST00000398652 TRMT112Q9UI30 125 aaKnown RBP18.21■□□□□ 0.51
FAM3B-204ENST00000398652 COL4A1P02462 1669 aa18.2■□□□□ 0.5
FAM3B-204ENST00000398652 VIL1P09327 827 aaKnown RBP18.2■□□□□ 0.5
FAM3B-204ENST00000398652 DOK7Q18PE1 504 aa18.2■□□□□ 0.5
FAM3B-204ENST00000398652 POLLQ9UGP5 575 aa18.2■□□□□ 0.5
FAM3B-204ENST00000398652 TM4SF4P48230 202 aa18.19■□□□□ 0.5
FAM3B-204ENST00000398652 ZNF280AP59817 542 aaPredicted RBP18.19■□□□□ 0.5
FAM3B-204ENST00000398652 GPSM2P81274 684 aa18.19■□□□□ 0.5
FAM3B-204ENST00000398652 SCARF1Q14162 830 aa18.18■□□□□ 0.5
FAM3B-204ENST00000398652 PROSER3Q2NL68 480 aa18.18■□□□□ 0.5
FAM3B-204ENST00000398652 MOB2Q70IA6 237 aa18.18■□□□□ 0.5
FAM3B-204ENST00000398652 CELF1Q92879 486 aaKnown RBP18.18■□□□□ 0.5
FAM3B-204ENST00000398652 PITPNM2Q9BZ72 1349 aa18.18■□□□□ 0.5
FAM3B-204ENST00000398652 FKTNO75072 461 aa18.17■□□□□ 0.5
FAM3B-204ENST00000398652 ANXA1P04083 346 aa18.17■□□□□ 0.5
FAM3B-204ENST00000398652 NEFMP07197 916 aa18.17■□□□□ 0.5
FAM3B-204ENST00000398652 FXR1P51114 621 aaKnown RBP eCLIP18.17■□□□□ 0.5
FAM3B-204ENST00000398652 TCIRG1Q13488 830 aa18.17■□□□□ 0.5
FAM3B-204ENST00000398652 CFHR5Q9BXR6 569 aa18.17■□□□□ 0.5
FAM3B-204ENST00000398652 MKI67P46013 3256 aaKnown RBP18.16■□□□□ 0.5
FAM3B-204ENST00000398652 EIF2S2P20042 333 aaKnown RBP18.16■□□□□ 0.5
FAM3B-204ENST00000398652 AGBL3Q8NEM8 1001 aa18.16■□□□□ 0.5
FAM3B-204ENST00000398652 TBC1D16Q8TBP0 767 aa18.16■□□□□ 0.5
FAM3B-204ENST00000398652 PCGF6Q9BYE7 350 aa18.16■□□□□ 0.5
FAM3B-204ENST00000398652 UBE2Q2LH0YL09 131 aa18.15■□□□□ 0.5
FAM3B-204ENST00000398652 PPP2R1AP30153 589 aa18.15■□□□□ 0.5
FAM3B-204ENST00000398652 SREBF2Q12772 1141 aa18.15■□□□□ 0.5
FAM3B-204ENST00000398652 SF3B3Q15393 1217 aaKnown RBP18.15■□□□□ 0.5
FAM3B-204ENST00000398652 COPS6Q7L5N1 327 aa18.15■□□□□ 0.5
FAM3B-204ENST00000398652 ZC3H12CQ9C0D7 883 aaKnown RBP18.15■□□□□ 0.5
FAM3B-204ENST00000398652 LAMB1P07942 1786 aa18.14■□□□□ 0.5
FAM3B-204ENST00000398652 INTS3Q68E01 1043 aaKnown RBP18.14■□□□□ 0.49
FAM3B-204ENST00000398652 RSBN1LQ6PCB5 846 aaPredicted RBP18.14■□□□□ 0.49
FAM3B-204ENST00000398652 XAGE3Q8WTP9 111 aa18.14■□□□□ 0.49
FAM3B-204ENST00000398652 NECTIN2Q92692 538 aa18.14■□□□□ 0.49
FAM3B-204ENST00000398652 POTEFA5A3E0 1075 aa18.13■□□□□ 0.49
FAM3B-204ENST00000398652 AIMP1Q12904 312 aaKnown RBP18.13■□□□□ 0.49
FAM3B-204ENST00000398652 MYOZ2Q9NPC6 264 aa18.13■□□□□ 0.49
FAM3B-204ENST00000398652 TSPYL4Q9UJ04 414 aa18.13■□□□□ 0.49
FAM3B-204ENST00000398652 G3V3G9 751 aa18.12■□□□□ 0.49
FAM3B-204ENST00000398652 USP17L8P0C7I0 530 aa18.12■□□□□ 0.49
FAM3B-204ENST00000398652 TTLL12Q14166 644 aaPredicted RBP18.12■□□□□ 0.49
FAM3B-204ENST00000398652 NFE2L2Q16236 605 aa18.12■□□□□ 0.49
FAM3B-204ENST00000398652 DCAF8Q5TAQ9 597 aa18.12■□□□□ 0.49
FAM3B-204ENST00000398652 R3HDMLQ9H3Y0 253 aa18.12■□□□□ 0.49
FAM3B-204ENST00000398652 PODXL2Q9NZ53 605 aa18.12■□□□□ 0.49
FAM3B-204ENST00000398652 HTTP42858 3142 aa18.12■□□□□ 0.49
FAM3B-204ENST00000398652 CEP290O15078 2479 aa18.12■□□□□ 0.49
FAM3B-204ENST00000398652 MKRN3Q13064 507 aaKnown RBP18.11■□□□□ 0.49
FAM3B-204ENST00000398652 GMLQ99445 158 aa18.11■□□□□ 0.49
FAM3B-204ENST00000398652 SCAF8Q9UPN6 1271 aaKnown RBP18.11■□□□□ 0.49
FAM3B-204ENST00000398652 ZNF646O15015 1829 aaPredicted RBP18.11■□□□□ 0.49
FAM3B-204ENST00000398652 TRIOBPQ9H2D6 2365 aa18.11■□□□□ 0.49
FAM3B-204ENST00000398652 UFL1O94874 794 aa18.1■□□□□ 0.49
FAM3B-204ENST00000398652 RPS8P62241 208 aaKnown RBP18.1■□□□□ 0.49
FAM3B-204ENST00000398652 ZNF428Q96B54 188 aa18.1■□□□□ 0.49
FAM3B-204ENST00000398652 FAM89AQ96GI7 184 aa18.1■□□□□ 0.49
FAM3B-204ENST00000398652 PLEKHF1Q96S99 279 aa18.1■□□□□ 0.49
FAM3B-204ENST00000398652 TRIM17Q9Y577 477 aa18.1■□□□□ 0.49
FAM3B-204ENST00000398652 ALDH1A1P00352 501 aa18.09■□□□□ 0.49
FAM3B-204ENST00000398652 NF2P35240 595 aa18.09■□□□□ 0.49
FAM3B-204ENST00000398652 PRAMEF18Q5VWM3 479 aa18.09■□□□□ 0.49
FAM3B-204ENST00000398652 OTOP1Q7RTM1 612 aa18.08■□□□□ 0.48
FAM3B-204ENST00000398652 GGA1Q9UJY5 639 aa18.08■□□□□ 0.48
FAM3B-204ENST00000398652 ISCA1Q9BUE6 129 aa18.07■□□□□ 0.48
FAM3B-204ENST00000398652 ANKIB1Q9P2G1 1089 aa18.07■□□□□ 0.48
FAM3B-204ENST00000398652 CENPFP49454 3210 aa18.07■□□□□ 0.48
FAM3B-204ENST00000398652 PTPN12Q05209 780 aaKnown RBP18.06■□□□□ 0.48
FAM3B-204ENST00000398652 NBPF9Q3BBW0 867 aa18.06■□□□□ 0.48
FAM3B-204ENST00000398652 PLBD2Q8NHP8 589 aa18.06■□□□□ 0.48
FAM3B-204ENST00000398652 BABAM1Q9NWV8 329 aa18.06■□□□□ 0.48
FAM3B-204ENST00000398652 MAPK8IP3Q9UPT6 1336 aa18.05■□□□□ 0.48
FAM3B-204ENST00000398652 BRCA2P51587 3418 aa18.05■□□□□ 0.48
FAM3B-204ENST00000398652 USP17L3A6NCW0 530 aa18.05■□□□□ 0.48
FAM3B-204ENST00000398652 USP17L4A6NCW7 530 aa18.05■□□□□ 0.48
FAM3B-204ENST00000398652 SPRYD7Q5W111 196 aa18.05■□□□□ 0.48
FAM3B-204ENST00000398652 USP17L1Q7RTZ2 530 aa18.05■□□□□ 0.48
FAM3B-204ENST00000398652 ARMC9Q7Z3E5 817 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms