RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 GBP2P32456 591 aaPredicted RBP2.81□□□□□ -1.96
HMGN2P39-201ENST00000398005 NOS2P35228 1153 aa2.81□□□□□ -1.96
HMGN2P39-201ENST00000398005 RHBDL3P58872 404 aa2.81□□□□□ -1.96
HMGN2P39-201ENST00000398005 OS9Q13438 667 aaPredicted RBP2.81□□□□□ -1.96
HMGN2P39-201ENST00000398005 RALBP1Q15311 655 aa2.81□□□□□ -1.96
HMGN2P39-201ENST00000398005 TLR1Q15399 786 aa2.81□□□□□ -1.96
HMGN2P39-201ENST00000398005 RTN1Q16799 776 aa2.81□□□□□ -1.96
HMGN2P39-201ENST00000398005 INTS6LQ5JSJ4 861 aaKnown RBP2.81□□□□□ -1.96
HMGN2P39-201ENST00000398005 RC3H1Q5TC82 1133 aaKnown RBP2.81□□□□□ -1.96
HMGN2P39-201ENST00000398005 NXPE4Q6UWF7 544 aa2.81□□□□□ -1.96
HMGN2P39-201ENST00000398005 LRP10Q7Z4F1 713 aa2.81□□□□□ -1.96
HMGN2P39-201ENST00000398005 TREML1Q86YW5 311 aa2.81□□□□□ -1.96
HMGN2P39-201ENST00000398005 WDR75Q8IWA0 830 aaKnown RBP2.81□□□□□ -1.96
HMGN2P39-201ENST00000398005 TRMT44Q8IYL2 757 aaKnown RBP2.81□□□□□ -1.96
HMGN2P39-201ENST00000398005 ALDH16A1Q8IZ83 802 aa2.81□□□□□ -1.96
HMGN2P39-201ENST00000398005 TRPM4Q8TD43 1214 aa2.81□□□□□ -1.96
HMGN2P39-201ENST00000398005 SGSM3Q96HU1 749 aa2.81□□□□□ -1.96
HMGN2P39-201ENST00000398005 IER2Q9BTL4 223 aa2.81□□□□□ -1.96
HMGN2P39-201ENST00000398005 C1QTNF2Q9BXJ5 285 aa2.81□□□□□ -1.96
HMGN2P39-201ENST00000398005 SRCIN1Q9C0H9 1055 aa2.81□□□□□ -1.96
HMGN2P39-201ENST00000398005 TMPRSS4Q9NRS4 437 aa2.81□□□□□ -1.96
HMGN2P39-201ENST00000398005 TYW1Q9NV66 732 aaKnown RBP2.81□□□□□ -1.96
HMGN2P39-201ENST00000398005 GEMIN8Q9NWZ8 242 aaKnown RBP2.81□□□□□ -1.96
HMGN2P39-201ENST00000398005 CABP1Q9NZU7 370 aa2.81□□□□□ -1.96
HMGN2P39-201ENST00000398005 PRKAG3Q9UGI9 489 aa2.81□□□□□ -1.96
HMGN2P39-201ENST00000398005 ADAMTS1Q9UHI8 967 aa2.81□□□□□ -1.96
HMGN2P39-201ENST00000398005 CDK2AP1O14519 115 aa2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 SMAD7O15105 426 aaKnown RBP2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 SIAH2O43255 324 aa2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 SH3BP5O60239 455 aa2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 TRIM37O94972 964 aa2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 GNRH1P01148 92 aa2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 CENPBP07199 599 aaPredicted RBP2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 BMP1P13497 986 aa2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 GSTT1P30711 240 aa2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 GMPRP36959 345 aa2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 EIF4A3P38919 411 aaKnown RBP2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 SOX9P48436 509 aa2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 MASP1P48740 699 aa2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 EVA1CP58658 441 aa2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 DHX9Q08211 1270 aaKnown RBP2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 CBLBQ13191 982 aa2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 COL9A2Q14055 689 aaPredicted RBP2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 ARID5BQ14865 1188 aa2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 CCDC85BQ15834 202 aaPredicted RBP2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 HSP90AB4PQ58FF6 505 aa2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 TNNI3KQ59H18 835 aa2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 SH3PXD2AQ5TCZ1 1133 aa2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 C16orf86Q6ZW13 317 aa2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 TRIM46Q7Z4K8 759 aa2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 KIAA0907Q7Z7F0 614 aaPredicted RBP2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 LILRB2Q8N423 598 aa2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 NBPF15Q8N660 670 aa2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 ZNF296Q8WUU4 475 aaPredicted RBP2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 KIFC2Q96AC6 838 aa2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 EAF1Q96JC9 268 aaPredicted RBP2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 RPS6KC1Q96S38 1066 aa2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 FEZ1Q99689 392 aa2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 BCO2Q9BYV7 579 aa2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 PHACTR1Q9C0D0 580 aa2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 CCDC113Q9H0I3 377 aa2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 NPHS2Q9NP85 383 aa2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 ST7Q9NRC1 585 aa2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 NXF1Q9UBU9 619 aaKnown RBP2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 FOXD3Q9UJU5 478 aaPredicted RBP2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 EID1Q9Y6B2 187 aa2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 PARP3Q9Y6F1 533 aa2.8□□□□□ -1.96
HMGN2P39-201ENST00000398005 ERBB4Q15303 1308 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 EML1O00423 815 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 PDPK1O15530 556 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 PLIN1O60240 522 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 PHACTR2O75167 634 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 TNFRSF21O75509 655 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 MICAL2O94851 1124 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 ALDH1A1P00352 501 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 POLR3DP05423 398 aaPredicted RBP2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 PAX3P23760 479 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 VEGFBP49765 207 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 WNT7BP56706 349 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 SH3BP2P78314 561 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 FAM160A1Q05DH4 1040 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 MTFR1Q15390 333 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 TEAD4Q15561 434 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 MAP3K11Q16584 847 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 AXDND1Q5T1B0 1012 aaPredicted RBP2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 FBXW10Q5XX13 1052 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 CCDC81Q6ZN84 652 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 TSHZ1Q6ZSZ6 1077 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 ZNF438Q7Z4V0 828 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 PPARGC1BQ86YN6 1023 aaKnown RBP2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 PGBD3Q8N328 593 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 ZNF784Q8NCA9 323 aaPredicted RBP2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 SNX29Q8TEQ0 813 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 L3MBTL2Q969R5 705 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 C8orf48Q96LL4 319 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 TMEM74Q96NL1 305 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 TRIM56Q9BRZ2 755 aaKnown RBP2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 RSRP1Q9BUV0 290 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 NOC4LQ9BVI4 516 aaKnown RBP2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 SRRTQ9BXP5 876 aaKnown RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms