RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 ZNF165P49910 485 aa6.35□□□□□ -1.39
PTPRD-205ENST00000397611 MLECQ14165 292 aa6.35□□□□□ -1.39
PTPRD-205ENST00000397611 GTF3C6Q969F1 213 aa6.35□□□□□ -1.39
PTPRD-205ENST00000397611 ZNF396Q96N95 335 aaPredicted RBP6.35□□□□□ -1.39
PTPRD-205ENST00000397611 TTC12Q9H892 705 aaPredicted RBP6.35□□□□□ -1.39
PTPRD-205ENST00000397611 CASTP20810 708 aaKnown RBP6.35□□□□□ -1.39
PTPRD-205ENST00000397611 STK3Q13188 491 aa6.35□□□□□ -1.39
PTPRD-205ENST00000397611 OLFM4Q6UX06 510 aa6.35□□□□□ -1.39
PTPRD-205ENST00000397611 MAP3K15Q6ZN16 1313 aa6.35□□□□□ -1.39
PTPRD-205ENST00000397611 ZNF274Q96GC6 653 aaPredicted RBP6.34□□□□□ -1.39
PTPRD-205ENST00000397611 TMX1Q9H3N1 280 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 SH3TC1Q8TE82 1336 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 IPO7O95373 1038 aaKnown RBP6.34□□□□□ -1.39
PTPRD-205ENST00000397611 GCP02774 474 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 GABPB1Q06547 395 aaPredicted RBP6.34□□□□□ -1.39
PTPRD-205ENST00000397611 GCKRQ14397 625 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 NBPF6Q5VWK0 638 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 ELOA2Q8IYF1 753 aaPredicted RBP6.34□□□□□ -1.39
PTPRD-205ENST00000397611 ANKRD24Q8TF21 1146 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 DCAF5Q96JK2 942 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 NBPF4Q96M43 638 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 CENPHQ9H3R5 247 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 DCCP43146 1447 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 SMTNL1A8MU46 457 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 PFKFB2O60825 505 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 SERPINC1P01008 464 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 LMAN1P49257 510 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 CT47A1Q5JQC4 288 aaPredicted RBP6.34□□□□□ -1.39
PTPRD-205ENST00000397611 LMOD2Q6P5Q4 547 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 SPATA32Q96LK8 384 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 MRC1P22897 1456 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 UBR1Q8IWV7 1749 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 NFAT5O94916 1531 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 RPS6KB1P23443 525 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 USP8P40818 1118 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 IL15P40933 162 aaPredicted RBP6.34□□□□□ -1.39
PTPRD-205ENST00000397611 TUBB4BP68371 445 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 TYRO3Q06418 890 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 DHX32Q7L7V1 743 aaKnown RBP6.34□□□□□ -1.39
PTPRD-205ENST00000397611 CDR1P51861 262 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 RBM6P78332 1123 aaKnown RBP6.34□□□□□ -1.39
PTPRD-205ENST00000397611 PRPF40BQ6NWY9 871 aaKnown RBP6.34□□□□□ -1.39
PTPRD-205ENST00000397611 CPLX2Q6PUV4 134 aaKnown RBP6.34□□□□□ -1.39
PTPRD-205ENST00000397611 JMYQ8N9B5 988 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 TSC1Q92574 1164 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 METTL22Q9BUU2 404 aaPredicted RBP6.34□□□□□ -1.39
PTPRD-205ENST00000397611 NPHP4O75161 1426 aaPredicted RBP6.34□□□□□ -1.39
PTPRD-205ENST00000397611 TSPOAP1O95153 1857 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 GJB2P29033 226 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 CEP135Q66GS9 1140 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 FSD1Q9BTV5 496 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 ANO10Q9NW15 660 aa6.34□□□□□ -1.39
PTPRD-205ENST00000397611 LEO1Q8WVC0 666 aaPredicted RBP6.34□□□□□ -1.4
PTPRD-205ENST00000397611 RAPGEF4Q8WZA2 1011 aa6.34□□□□□ -1.4
PTPRD-205ENST00000397611 PHAXQ9H814 394 aaKnown RBP6.34□□□□□ -1.4
PTPRD-205ENST00000397611 HELLSQ9NRZ9 838 aa6.34□□□□□ -1.4
PTPRD-205ENST00000397611 OGFRQ9NZT2 677 aa6.34□□□□□ -1.4
PTPRD-205ENST00000397611 IMPACTQ9P2X3 320 aa6.34□□□□□ -1.4
PTPRD-205ENST00000397611 U2AF2P26368 475 aaKnown RBP eCLIP6.33□□□□□ -1.4
PTPRD-205ENST00000397611 RCAN1P53805 252 aa6.33□□□□□ -1.4
PTPRD-205ENST00000397611 FAM160A1Q05DH4 1040 aa6.33□□□□□ -1.4
PTPRD-205ENST00000397611 CHPF2Q9P2E5 772 aa6.33□□□□□ -1.4
PTPRD-205ENST00000397611 CPLX1O14810 134 aa6.33□□□□□ -1.4
PTPRD-205ENST00000397611 BRAPQ7Z569 592 aa6.33□□□□□ -1.4
PTPRD-205ENST00000397611 CKAP2LQ8IYA6 745 aa6.33□□□□□ -1.4
PTPRD-205ENST00000397611 C17orf53Q8N3J3 647 aaPredicted RBP6.33□□□□□ -1.4
PTPRD-205ENST00000397611 SRRTQ9BXP5 876 aaKnown RBP6.33□□□□□ -1.4
PTPRD-205ENST00000397611 SNRPA1P09661 255 aaKnown RBP6.33□□□□□ -1.4
PTPRD-205ENST00000397611 FERMT3Q86UX7 667 aa6.33□□□□□ -1.4
PTPRD-205ENST00000397611 AACSQ86V21 672 aa6.33□□□□□ -1.4
PTPRD-205ENST00000397611 KIF18AQ8NI77 898 aa6.33□□□□□ -1.4
PTPRD-205ENST00000397611 PALLDQ8WX93 1383 aa6.33□□□□□ -1.4
PTPRD-205ENST00000397611 SASH1O94885 1247 aa6.33□□□□□ -1.4
PTPRD-205ENST00000397611 BMS1Q14692 1282 aaKnown RBP6.33□□□□□ -1.4
PTPRD-205ENST00000397611 FCHSD1Q86WN1 690 aa6.33□□□□□ -1.4
PTPRD-205ENST00000397611 BTBD11A6QL63 1104 aa6.33□□□□□ -1.4
PTPRD-205ENST00000397611 NEK1Q96PY6 1258 aa6.33□□□□□ -1.4
PTPRD-205ENST00000397611 OSBPL5Q9H0X9 879 aaPredicted RBP6.33□□□□□ -1.4
PTPRD-205ENST00000397611 URI1O94763 535 aaPredicted RBP6.33□□□□□ -1.4
PTPRD-205ENST00000397611 SYNE3Q6ZMZ3 975 aa6.33□□□□□ -1.4
PTPRD-205ENST00000397611 NUTM1Q86Y26 1132 aa6.33□□□□□ -1.4
PTPRD-205ENST00000397611 CCDC191Q8NCU4 936 aa6.33□□□□□ -1.4
PTPRD-205ENST00000397611 KAZALD1Q96I82 304 aa6.33□□□□□ -1.4
PTPRD-205ENST00000397611 NSFL1CQ9UNZ2 370 aaKnown RBP6.33□□□□□ -1.4
PTPRD-205ENST00000397611 CRYBG1Q9Y4K1 1723 aa6.33□□□□□ -1.4
PTPRD-205ENST00000397611 TUBBP07437 444 aa6.32□□□□□ -1.4
PTPRD-205ENST00000397611 NAP1L1P55209 391 aaKnown RBP6.32□□□□□ -1.4
PTPRD-205ENST00000397611 CWC27Q6UX04 472 aaKnown RBP6.32□□□□□ -1.4
PTPRD-205ENST00000397611 IFNL2Q8IZJ0 200 aa6.32□□□□□ -1.4
PTPRD-205ENST00000397611 TXLNBQ8N3L3 684 aa6.32□□□□□ -1.4
PTPRD-205ENST00000397611 KCNG4Q8TDN1 519 aa6.32□□□□□ -1.4
PTPRD-205ENST00000397611 BPIFA3Q9BQP9 254 aa6.32□□□□□ -1.4
PTPRD-205ENST00000397611 SPG7Q9UQ90 795 aa6.32□□□□□ -1.4
PTPRD-205ENST00000397611 SLIT3O75094 1523 aa6.32□□□□□ -1.4
PTPRD-205ENST00000397611 PSDA5PKW4 1024 aaPredicted RBP6.32□□□□□ -1.4
PTPRD-205ENST00000397611 GTF2E1P29083 439 aaPredicted RBP6.32□□□□□ -1.4
PTPRD-205ENST00000397611 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.32□□□□□ -1.4
PTPRD-205ENST00000397611 CARMIL3Q8ND23 1372 aa6.32□□□□□ -1.4
PTPRD-205ENST00000397611 FAM237AA0A1B0GTK4 181 aa6.32□□□□□ -1.4
PTPRD-205ENST00000397611 CIAO1O76071 339 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms