RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 CCDC113Q9H0I3 377 aa8.48□□□□□ -1.05
SMCO1-201ENST00000397537 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.48□□□□□ -1.05
SMCO1-201ENST00000397537 TAGLN3Q9UI15 199 aa8.48□□□□□ -1.05
SMCO1-201ENST00000397537 EFR3BQ9Y2G0 817 aa8.48□□□□□ -1.05
SMCO1-201ENST00000397537 COL9A1P20849 921 aa8.47□□□□□ -1.05
SMCO1-201ENST00000397537 ZKSCAN2Q63HK3 967 aa8.47□□□□□ -1.05
SMCO1-201ENST00000397537 ALKBH2Q6NS38 261 aa8.47□□□□□ -1.05
SMCO1-201ENST00000397537 C16orf46Q6P387 395 aa8.47□□□□□ -1.05
SMCO1-201ENST00000397537 MAP10Q9P2G4 905 aa8.47□□□□□ -1.05
SMCO1-201ENST00000397537 FGD5Q6ZNL6 1462 aa8.47□□□□□ -1.05
SMCO1-201ENST00000397537 PCF11O94913 1555 aaKnown RBP8.47□□□□□ -1.05
SMCO1-201ENST00000397537 WASLO00401 505 aaPredicted RBP8.47□□□□□ -1.05
SMCO1-201ENST00000397537 FOXO3O43524 673 aa8.47□□□□□ -1.05
SMCO1-201ENST00000397537 IGFBP4P22692 258 aa8.47□□□□□ -1.05
SMCO1-201ENST00000397537 TAF1CQ15572 869 aaPredicted RBP8.47□□□□□ -1.05
SMCO1-201ENST00000397537 L1TD1Q5T7N2 865 aaKnown RBP8.47□□□□□ -1.05
SMCO1-201ENST00000397537 CREBRFQ8IUR6 639 aa8.47□□□□□ -1.05
SMCO1-201ENST00000397537 SPON2Q9BUD6 331 aa8.47□□□□□ -1.05
SMCO1-201ENST00000397537 GINM1Q9NU53 330 aa8.47□□□□□ -1.05
SMCO1-201ENST00000397537 SPG7Q9UQ90 795 aa8.47□□□□□ -1.05
SMCO1-201ENST00000397537 ALG1L2C9J202 215 aa8.46□□□□□ -1.06
SMCO1-201ENST00000397537 M0R2N6 131 aa8.46□□□□□ -1.06
SMCO1-201ENST00000397537 OPLAHO14841 1288 aa8.46□□□□□ -1.06
SMCO1-201ENST00000397537 RNF20Q5VTR2 975 aa8.46□□□□□ -1.06
SMCO1-201ENST00000397537 ERAP2Q6P179 960 aa8.46□□□□□ -1.06
SMCO1-201ENST00000397537 SLC4A10Q6U841 1118 aa8.46□□□□□ -1.06
SMCO1-201ENST00000397537 ATCAYQ86WG3 371 aa8.46□□□□□ -1.06
SMCO1-201ENST00000397537 DRC7Q8IY82 874 aa8.46□□□□□ -1.06
SMCO1-201ENST00000397537 GJD3Q8N144 294 aa8.46□□□□□ -1.06
SMCO1-201ENST00000397537 ZNF454Q8N9F8 522 aa8.46□□□□□ -1.06
SMCO1-201ENST00000397537 CSRNP1Q96S65 589 aa8.46□□□□□ -1.06
SMCO1-201ENST00000397537 ZIM2Q9NZV7 527 aa8.46□□□□□ -1.06
SMCO1-201ENST00000397537 CD2APQ9Y5K6 639 aa8.46□□□□□ -1.06
SMCO1-201ENST00000397537 NBPF26B4DH59 902 aa8.45□□□□□ -1.06
SMCO1-201ENST00000397537 SMAPO00193 183 aa8.45□□□□□ -1.06
SMCO1-201ENST00000397537 THNSL2Q86YJ6 484 aa8.45□□□□□ -1.06
SMCO1-201ENST00000397537 CDC5LQ99459 802 aaKnown RBP8.45□□□□□ -1.06
SMCO1-201ENST00000397537 KBTBD4Q9NVX7 518 aa8.45□□□□□ -1.06
SMCO1-201ENST00000397537 PRKAG3Q9UGI9 489 aa8.45□□□□□ -1.06
SMCO1-201ENST00000397537 PDZRN3Q9UPQ7 1066 aa8.45□□□□□ -1.06
SMCO1-201ENST00000397537 GPSM3Q9Y4H4 160 aa8.45□□□□□ -1.06
SMCO1-201ENST00000397537 PTPRMP28827 1452 aa8.45□□□□□ -1.06
SMCO1-201ENST00000397537 ZBTB39O15060 712 aa8.45□□□□□ -1.06
SMCO1-201ENST00000397537 PMLP29590 882 aa8.45□□□□□ -1.06
SMCO1-201ENST00000397537 ORC1Q13415 861 aa8.45□□□□□ -1.06
SMCO1-201ENST00000397537 SPICE1Q8N0Z3 855 aa8.45□□□□□ -1.06
SMCO1-201ENST00000397537 STIM2Q9P246 746 aa8.45□□□□□ -1.06
SMCO1-201ENST00000397537 GLI2P10070 1586 aa8.44□□□□□ -1.06
SMCO1-201ENST00000397537 CCDC88BA6NC98 1476 aa8.44□□□□□ -1.06
SMCO1-201ENST00000397537 MORC3Q14149 939 aa8.44□□□□□ -1.06
SMCO1-201ENST00000397537 C2orf27AQ580R0 203 aa8.44□□□□□ -1.06
SMCO1-201ENST00000397537 KIAA0825Q8IV33 1275 aa8.44□□□□□ -1.06
SMCO1-201ENST00000397537 NGDNQ8NEJ9 315 aaKnown RBP8.44□□□□□ -1.06
SMCO1-201ENST00000397537 OSBPL7Q9BZF2 842 aa8.44□□□□□ -1.06
SMCO1-201ENST00000397537 MUC3BQ9H195 1237 aa8.44□□□□□ -1.06
SMCO1-201ENST00000397537 CDV3Q9UKY7 258 aaKnown RBP8.44□□□□□ -1.06
SMCO1-201ENST00000397537 PPP2R3BQ9Y5P8 575 aa8.44□□□□□ -1.06
SMCO1-201ENST00000397537 AKAP10O43572 662 aa8.43□□□□□ -1.06
SMCO1-201ENST00000397537 SRGNP10124 158 aa8.43□□□□□ -1.06
SMCO1-201ENST00000397537 STAT3P40763 770 aa8.43□□□□□ -1.06
SMCO1-201ENST00000397537 SOX9P48436 509 aa8.43□□□□□ -1.06
SMCO1-201ENST00000397537 PTK2Q05397 1052 aa8.43□□□□□ -1.06
SMCO1-201ENST00000397537 IFRD2Q12894 506 aaPredicted RBP8.43□□□□□ -1.06
SMCO1-201ENST00000397537 C21orf62-AS1Q17RA5 79 aa8.43□□□□□ -1.06
SMCO1-201ENST00000397537 FAM26DQ5JW98 314 aa8.43□□□□□ -1.06
SMCO1-201ENST00000397537 TEX19Q8NA77 164 aa8.43□□□□□ -1.06
SMCO1-201ENST00000397537 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.43□□□□□ -1.06
SMCO1-201ENST00000397537 ANAPC16Q96DE5 110 aa8.43□□□□□ -1.06
SMCO1-201ENST00000397537 RSPH9Q9H1X1 276 aaPredicted RBP8.43□□□□□ -1.06
SMCO1-201ENST00000397537 ADAMTS1Q9UHI8 967 aa8.43□□□□□ -1.06
SMCO1-201ENST00000397537 STRIP2Q9ULQ0 834 aa8.43□□□□□ -1.06
SMCO1-201ENST00000397537 POLIQ9UNA4 740 aa8.43□□□□□ -1.06
SMCO1-201ENST00000397537 PCDHGA4Q9Y5G9 962 aa8.43□□□□□ -1.06
SMCO1-201ENST00000397537 KAT6BQ8WYB5 2073 aa8.43□□□□□ -1.06
SMCO1-201ENST00000397537 DYTNA2CJ06 578 aa8.43□□□□□ -1.06
SMCO1-201ENST00000397537 ZRANB2O95218 330 aaKnown RBP eCLIP8.43□□□□□ -1.06
SMCO1-201ENST00000397537 RASGRP1O95267 797 aa8.43□□□□□ -1.06
SMCO1-201ENST00000397537 ASMTLO95671 621 aa8.43□□□□□ -1.06
SMCO1-201ENST00000397537 ST13P50502 369 aaKnown RBP8.43□□□□□ -1.06
SMCO1-201ENST00000397537 TCEA2Q15560 299 aa8.43□□□□□ -1.06
SMCO1-201ENST00000397537 KANK3Q6NY19 840 aa8.43□□□□□ -1.06
SMCO1-201ENST00000397537 CHAC2Q8WUX2 184 aa8.43□□□□□ -1.06
SMCO1-201ENST00000397537 ASPSCR1Q9BZE9 553 aa8.43□□□□□ -1.06
SMCO1-201ENST00000397537 RBSNQ9H1K0 784 aa8.43□□□□□ -1.06
SMCO1-201ENST00000397537 ZNF69Q9UC07 566 aa8.43□□□□□ -1.06
SMCO1-201ENST00000397537 EIF1AYO14602 144 aaKnown RBP8.42□□□□□ -1.06
SMCO1-201ENST00000397537 MYL3P08590 195 aa8.42□□□□□ -1.06
SMCO1-201ENST00000397537 VDRP11473 427 aa8.42□□□□□ -1.06
SMCO1-201ENST00000397537 FAM83BQ5T0W9 1011 aa8.42□□□□□ -1.06
SMCO1-201ENST00000397537 AXDND1Q5T1B0 1012 aaPredicted RBP8.42□□□□□ -1.06
SMCO1-201ENST00000397537 ADAM32Q8TC27 787 aa8.42□□□□□ -1.06
SMCO1-201ENST00000397537 SCG3Q8WXD2 468 aaKnown RBP8.42□□□□□ -1.06
SMCO1-201ENST00000397537 R3HCC1Q9Y3T6 440 aaKnown RBP8.42□□□□□ -1.06
SMCO1-201ENST00000397537 CTDP1Q9Y5B0 961 aaPredicted RBP8.42□□□□□ -1.06
SMCO1-201ENST00000397537 TMEM238LA0A1B0GVL6 79 aa8.41□□□□□ -1.06
SMCO1-201ENST00000397537 PDPK1O15530 556 aa8.41□□□□□ -1.06
SMCO1-201ENST00000397537 SLC26A4O43511 780 aa8.41□□□□□ -1.06
SMCO1-201ENST00000397537 VARSP26640 1264 aaKnown RBP8.41□□□□□ -1.06
SMCO1-201ENST00000397537 NFKB2Q00653 900 aa8.41□□□□□ -1.06
SMCO1-201ENST00000397537 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms