RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 TIMM10P62072 90 aa26.01■■□□□ 1.75
CPNE1-204ENST00000397443 SALL3Q9BXA9 1300 aa26.01■■□□□ 1.75
CPNE1-204ENST00000397443 TAF5LO75529 589 aa26■■□□□ 1.75
CPNE1-204ENST00000397443 RBM17Q96I25 401 aaKnown RBP26■■□□□ 1.75
CPNE1-204ENST00000397443 MROH5Q6ZUA9 1318 aa25.99■■□□□ 1.75
CPNE1-204ENST00000397443 SLC51AQ86UW1 340 aa25.99■■□□□ 1.75
CPNE1-204ENST00000397443 BSDC1Q9NW68 430 aaPredicted RBP25.99■■□□□ 1.75
CPNE1-204ENST00000397443 A0A1B0GUL7 405 aa25.98■■□□□ 1.75
CPNE1-204ENST00000397443 PDE6BP35913 854 aa25.98■■□□□ 1.75
CPNE1-204ENST00000397443 CHRNDQ07001 517 aa25.98■■□□□ 1.75
CPNE1-204ENST00000397443 GRAPQ13588 217 aa25.98■■□□□ 1.75
CPNE1-204ENST00000397443 GRAPLQ8TC17 118 aaPredicted RBP25.98■■□□□ 1.75
CPNE1-204ENST00000397443 DBNDD2Q9BQY9 259 aa25.98■■□□□ 1.75
CPNE1-204ENST00000397443 DBNLQ9UJU6 430 aaKnown RBP25.98■■□□□ 1.75
CPNE1-204ENST00000397443 SNAP23O00161 211 aa25.98■■□□□ 1.75
CPNE1-204ENST00000397443 PDE8BO95263 885 aa25.97■■□□□ 1.75
CPNE1-204ENST00000397443 GSPT1P15170 499 aaKnown RBP25.97■■□□□ 1.75
CPNE1-204ENST00000397443 TTC22Q5TAA0 569 aa25.97■■□□□ 1.75
CPNE1-204ENST00000397443 VGLL2Q8N8G2 317 aa25.97■■□□□ 1.75
CPNE1-204ENST00000397443 MTFR1LQ9H019 292 aa25.97■■□□□ 1.75
CPNE1-204ENST00000397443 ZNF609O15014 1411 aa25.97■■□□□ 1.75
CPNE1-204ENST00000397443 KLRG2A4D1S0 409 aaPredicted RBP25.96■■□□□ 1.75
CPNE1-204ENST00000397443 ATP2B3Q16720 1220 aa25.96■■□□□ 1.75
CPNE1-204ENST00000397443 AKAP2Q9Y2D5 859 aa25.96■■□□□ 1.75
CPNE1-204ENST00000397443 GPATCH3Q96I76 525 aa25.96■■□□□ 1.75
CPNE1-204ENST00000397443 GPR108Q9NPR9 543 aa25.96■■□□□ 1.75
CPNE1-204ENST00000397443 STAP2Q9UGK3 403 aa25.96■■□□□ 1.75
CPNE1-204ENST00000397443 MINPP1Q9UNW1 487 aa25.96■■□□□ 1.75
CPNE1-204ENST00000397443 SRGNP10124 158 aa25.95■■□□□ 1.74
CPNE1-204ENST00000397443 C2CD5Q86YS7 1000 aa25.95■■□□□ 1.74
CPNE1-204ENST00000397443 OSBPL3Q9H4L5 887 aa25.95■■□□□ 1.74
CPNE1-204ENST00000397443 MAP4K4O95819 1239 aaPredicted RBP25.94■■□□□ 1.74
CPNE1-204ENST00000397443 ADORA1P30542 326 aa25.94■■□□□ 1.74
CPNE1-204ENST00000397443 ZNF622Q969S3 477 aaKnown RBP eCLIP25.94■■□□□ 1.744e-6■■□□□ 12.1
CPNE1-204ENST00000397443 ECHDC1Q9NTX5 307 aa25.94■■□□□ 1.74
CPNE1-204ENST00000397443 CHRNA5P30532 468 aa25.94■■□□□ 1.74
CPNE1-204ENST00000397443 COL11A2P13942 1736 aaPredicted RBP25.93■■□□□ 1.74
CPNE1-204ENST00000397443 POLD1P28340 1107 aa25.93■■□□□ 1.74
CPNE1-204ENST00000397443 HOXA10P31260 410 aaPredicted RBP25.93■■□□□ 1.74
CPNE1-204ENST00000397443 BMP2KLQ5H9B9 411 aa25.93■■□□□ 1.74
CPNE1-204ENST00000397443 PI4K2BQ8TCG2 481 aa25.93■■□□□ 1.74
CPNE1-204ENST00000397443 NPR1P16066 1061 aa25.92■■□□□ 1.74
CPNE1-204ENST00000397443 PUM3Q15397 648 aaKnown RBP25.92■■□□□ 1.74
CPNE1-204ENST00000397443 GORABQ5T7V8 394 aa25.92■■□□□ 1.74
CPNE1-204ENST00000397443 XAGE2Q96GT9 111 aa25.92■■□□□ 1.74
CPNE1-204ENST00000397443 TTC41PQ6P2S7 1318 aa25.92■■□□□ 1.74
CPNE1-204ENST00000397443 WTIPA6NIX2 430 aaPredicted RBP25.92■■□□□ 1.74
CPNE1-204ENST00000397443 H0YIN7 160 aa25.92■■□□□ 1.74
CPNE1-204ENST00000397443 CRAMP1Q96RY5 1269 aa25.91■■□□□ 1.74
CPNE1-204ENST00000397443 TRIM6-TRIM34B2RNG4 842 aa25.9■■□□□ 1.74
CPNE1-204ENST00000397443 ERC2O15083 957 aa25.9■■□□□ 1.74
CPNE1-204ENST00000397443 MASTLQ96GX5 879 aa25.9■■□□□ 1.74
CPNE1-204ENST00000397443 BOLA2Q9H3K6 86 aa25.9■■□□□ 1.74
CPNE1-204ENST00000397443 PPP1R1BQ9UD71 204 aaPredicted RBP25.9■■□□□ 1.74
CPNE1-204ENST00000397443 AOX1Q06278 1338 aa25.9■■□□□ 1.74
CPNE1-204ENST00000397443 GLRX3O76003 335 aaKnown RBP25.89■■□□□ 1.74
CPNE1-204ENST00000397443 SDSP20132 328 aa25.89■■□□□ 1.74
CPNE1-204ENST00000397443 LPIN2Q92539 896 aa25.89■■□□□ 1.74
CPNE1-204ENST00000397443 RILPL2Q969X0 211 aa25.89■■□□□ 1.74
CPNE1-204ENST00000397443 ANKIB1Q9P2G1 1089 aa25.89■■□□□ 1.74
CPNE1-204ENST00000397443 GOLGB1Q14789 3259 aaKnown RBP25.89■■□□□ 1.73
CPNE1-204ENST00000397443 KLHL34Q8N239 644 aa25.88■■□□□ 1.73
CPNE1-204ENST00000397443 C10orf71Q711Q0 1435 aa25.88■■□□□ 1.73
CPNE1-204ENST00000397443 PPEF1O14829 653 aaPredicted RBP25.88■■□□□ 1.73
CPNE1-204ENST00000397443 BBOX1O75936 387 aa25.88■■□□□ 1.73
CPNE1-204ENST00000397443 SLC5A1P13866 664 aa25.88■■□□□ 1.73
CPNE1-204ENST00000397443 FGFR2P21802 821 aa25.88■■□□□ 1.73
CPNE1-204ENST00000397443 KCNJ4P48050 445 aa25.88■■□□□ 1.73
CPNE1-204ENST00000397443 NDUFB9Q9Y6M9 179 aa25.88■■□□□ 1.73
CPNE1-204ENST00000397443 CACNA1SQ13698 1873 aa25.87■■□□□ 1.73
CPNE1-204ENST00000397443 A0A1B0GUL6 1792 aa25.87■■□□□ 1.73
CPNE1-204ENST00000397443 ALDH1B1P30837 517 aa25.86■■□□□ 1.73
CPNE1-204ENST00000397443 C8orf34Q49A92 452 aa25.86■■□□□ 1.73
CPNE1-204ENST00000397443 ANKRD2Q9GZV1 360 aa25.86■■□□□ 1.73
CPNE1-204ENST00000397443 IFIT1P09914 478 aaKnown RBP25.86■■□□□ 1.73
CPNE1-204ENST00000397443 CCDC158Q5M9N0 1113 aa25.86■■□□□ 1.73
CPNE1-204ENST00000397443 TTC39AQ5SRH9 613 aa25.86■■□□□ 1.73
CPNE1-204ENST00000397443 OLFM4Q6UX06 510 aa25.86■■□□□ 1.73
CPNE1-204ENST00000397443 ZNF219Q9P2Y4 722 aaPredicted RBP25.85■■□□□ 1.73
CPNE1-204ENST00000397443 NSFL1CQ9UNZ2 370 aaKnown RBP25.85■■□□□ 1.73
CPNE1-204ENST00000397443 DNAJC2Q99543 621 aaKnown RBP25.84■■□□□ 1.73
CPNE1-204ENST00000397443 A0A0G2JLW4 131 aa25.84■■□□□ 1.73
CPNE1-204ENST00000397443 ATP5JP18859 108 aa25.84■■□□□ 1.73
CPNE1-204ENST00000397443 GPSM2P81274 684 aa25.84■■□□□ 1.73
CPNE1-204ENST00000397443 PHKA1P46020 1223 aa25.83■■□□□ 1.73
CPNE1-204ENST00000397443 STYK1Q6J9G0 422 aa25.83■■□□□ 1.73
CPNE1-204ENST00000397443 EDC3Q96F86 508 aaKnown RBP25.83■■□□□ 1.73
CPNE1-204ENST00000397443 WWC3Q9ULE0 1092 aa25.83■■□□□ 1.73
CPNE1-204ENST00000397443 KLRK1P26718 216 aa25.82■■□□□ 1.72
CPNE1-204ENST00000397443 UBE4AQ14139 1066 aa25.82■■□□□ 1.72
CPNE1-204ENST00000397443 ZNF804BA4D1E1 1349 aa25.82■■□□□ 1.72
CPNE1-204ENST00000397443 XDHP47989 1333 aa25.82■■□□□ 1.72
CPNE1-204ENST00000397443 BCAMP50895 628 aa25.82■■□□□ 1.72
CPNE1-204ENST00000397443 CCDC102BQ68D86 513 aa25.82■■□□□ 1.72
CPNE1-204ENST00000397443 PRPF40BQ6NWY9 871 aaKnown RBP25.82■■□□□ 1.72
CPNE1-204ENST00000397443 GPR101Q96P66 508 aaPredicted RBP25.82■■□□□ 1.72
CPNE1-204ENST00000397443 SGIP1Q9BQI5 828 aa25.82■■□□□ 1.72
CPNE1-204ENST00000397443 SNRKQ9NRH2 765 aa25.82■■□□□ 1.72
CPNE1-204ENST00000397443 DPEP1P16444 411 aa25.81■■□□□ 1.72
CPNE1-204ENST00000397443 PTGER2P43116 358 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms