RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 DBNLQ9UJU6 430 aaKnown RBP33.74■■■□□ 2.99
CPNE1-203ENST00000397442 TTC41PQ6P2S7 1318 aa33.73■■■□□ 2.99
CPNE1-203ENST00000397442 ANKRD18AQ8IVF6 992 aa33.73■■■□□ 2.99
CPNE1-203ENST00000397442 BACH2Q9BYV9 841 aa33.73■■■□□ 2.99
CPNE1-203ENST00000397442 MROH5Q6ZUA9 1318 aa33.72■■■□□ 2.99
CPNE1-203ENST00000397442 ECHDC1Q9NTX5 307 aa33.71■■■□□ 2.99
CPNE1-203ENST00000397442 TIMM10P62072 90 aa33.71■■■□□ 2.99
CPNE1-203ENST00000397442 DDX46Q7L014 1031 aaKnown RBP33.71■■■□□ 2.99
CPNE1-203ENST00000397442 BSDC1Q9NW68 430 aaPredicted RBP33.71■■■□□ 2.99
CPNE1-203ENST00000397442 A0A1B0GUL7 405 aa33.7■■■□□ 2.99
CPNE1-203ENST00000397442 RPS8P62241 208 aaKnown RBP33.7■■■□□ 2.99
CPNE1-203ENST00000397442 SLC16A10Q8TF71 515 aa33.7■■■□□ 2.99
CPNE1-203ENST00000397442 DBNDD2Q9BQY9 259 aa33.7■■■□□ 2.99
CPNE1-203ENST00000397442 BRIP1Q9BX63 1249 aa33.7■■■□□ 2.99
CPNE1-203ENST00000397442 PDE8BO95263 885 aa33.69■■■□□ 2.98
CPNE1-203ENST00000397442 AKAP2Q9Y2D5 859 aa33.69■■■□□ 2.98
CPNE1-203ENST00000397442 A0A1B0GUL6 1792 aa33.69■■■□□ 2.98
CPNE1-203ENST00000397442 GPATCH3Q96I76 525 aa33.68■■■□□ 2.98
CPNE1-203ENST00000397442 SDSP20132 328 aa33.67■■■□□ 2.98
CPNE1-203ENST00000397442 HELBQ8NG08 1087 aaPredicted RBP33.67■■■□□ 2.98
CPNE1-203ENST00000397442 TSHZ2Q9NRE2 1034 aa33.67■■■□□ 2.98
CPNE1-203ENST00000397442 NEUROD6Q96NK8 337 aa33.66■■■□□ 2.98
CPNE1-203ENST00000397442 CHRNDQ07001 517 aa33.65■■■□□ 2.98
CPNE1-203ENST00000397442 RPGRQ92834 1020 aaKnown RBP33.65■■■□□ 2.98
CPNE1-203ENST00000397442 GLRX3O76003 335 aaKnown RBP33.64■■■□□ 2.98
CPNE1-203ENST00000397442 HOXA10P31260 410 aaPredicted RBP33.64■■■□□ 2.98
CPNE1-203ENST00000397442 GRAPQ13588 217 aa33.64■■■□□ 2.98
CPNE1-203ENST00000397442 ATP2B3Q16720 1220 aa33.64■■■□□ 2.98
CPNE1-203ENST00000397442 GRAPLQ8TC17 118 aaPredicted RBP33.64■■■□□ 2.98
CPNE1-203ENST00000397442 ERC2O15083 957 aa33.64■■■□□ 2.98
CPNE1-203ENST00000397442 FGFR2P21802 821 aa33.64■■■□□ 2.98
CPNE1-203ENST00000397442 MINPP1Q9UNW1 487 aa33.64■■■□□ 2.98
CPNE1-203ENST00000397442 COL11A2P13942 1736 aaPredicted RBP33.62■■■□□ 2.97
CPNE1-203ENST00000397442 TAF5LO75529 589 aa33.62■■■□□ 2.97
CPNE1-203ENST00000397442 ADORA1P30542 326 aa33.62■■■□□ 2.97
CPNE1-203ENST00000397442 PUM3Q15397 648 aaKnown RBP33.61■■■□□ 2.97
CPNE1-203ENST00000397442 XAGE2Q96GT9 111 aa33.61■■■□□ 2.97
CPNE1-203ENST00000397442 RBM17Q96I25 401 aaKnown RBP33.61■■■□□ 2.97
CPNE1-203ENST00000397442 ARAP2Q8WZ64 1704 aa33.61■■■□□ 2.97
CPNE1-203ENST00000397442 ATP5JP18859 108 aa33.6■■■□□ 2.97
CPNE1-203ENST00000397442 PDE6BP35913 854 aa33.6■■■□□ 2.97
CPNE1-203ENST00000397442 SNAP23O00161 211 aa33.59■■■□□ 2.97
CPNE1-203ENST00000397442 SRGNP10124 158 aa33.59■■■□□ 2.97
CPNE1-203ENST00000397442 R3HDM1Q15032 1099 aaKnown RBP33.59■■■□□ 2.97
CPNE1-203ENST00000397442 CRAMP1Q96RY5 1269 aa33.59■■■□□ 2.97
CPNE1-203ENST00000397442 ILDR2Q71H61 639 aa33.58■■■□□ 2.97
CPNE1-203ENST00000397442 LPIN2Q92539 896 aa33.58■■■□□ 2.97
CPNE1-203ENST00000397442 MAP4K4O95819 1239 aaPredicted RBP33.57■■■□□ 2.96
CPNE1-203ENST00000397442 SLC51AQ86UW1 340 aa33.56■■■□□ 2.96
CPNE1-203ENST00000397442 BOLA2Q9H3K6 86 aa33.56■■■□□ 2.96
CPNE1-203ENST00000397442 TRIM6-TRIM34B2RNG4 842 aa33.55■■■□□ 2.96
CPNE1-203ENST00000397442 CDC45O75419 566 aa33.55■■■□□ 2.96
CPNE1-203ENST00000397442 TBC1D9Q6ZT07 1266 aa33.55■■■□□ 2.96
CPNE1-203ENST00000397442 AK9Q5TCS8 1911 aa33.55■■■□□ 2.96
CPNE1-203ENST00000397442 ZBTB7AO95365 584 aa33.55■■■□□ 2.96
CPNE1-203ENST00000397442 NPR1P16066 1061 aa33.55■■■□□ 2.96
CPNE1-203ENST00000397442 SEC24BO95487 1268 aa33.54■■■□□ 2.96
CPNE1-203ENST00000397442 RILPL2Q969X0 211 aa33.54■■■□□ 2.96
CPNE1-203ENST00000397442 C10orf71Q711Q0 1435 aa33.54■■■□□ 2.96
CPNE1-203ENST00000397442 WTIPA6NIX2 430 aaPredicted RBP33.53■■■□□ 2.96
CPNE1-203ENST00000397442 SLC5A1P13866 664 aa33.53■■■□□ 2.96
CPNE1-203ENST00000397442 BBOX1O75936 387 aa33.52■■■□□ 2.96
CPNE1-203ENST00000397442 ANKRD2Q9GZV1 360 aa33.52■■■□□ 2.96
CPNE1-203ENST00000397442 MTFR1LQ9H019 292 aa33.52■■■□□ 2.96
CPNE1-203ENST00000397442 UBE4AQ14139 1066 aa33.52■■■□□ 2.96
CPNE1-203ENST00000397442 CCDC158Q5M9N0 1113 aa33.52■■■□□ 2.96
CPNE1-203ENST00000397442 GORABQ5T7V8 394 aa33.52■■■□□ 2.96
CPNE1-203ENST00000397442 HAUS7Q99871 368 aa33.52■■■□□ 2.96
CPNE1-203ENST00000397442 CNTROBQ8N137 903 aa33.51■■■□□ 2.95
CPNE1-203ENST00000397442 MASTLQ96GX5 879 aa33.51■■■□□ 2.95
CPNE1-203ENST00000397442 IFIT1P09914 478 aaKnown RBP33.5■■■□□ 2.95
CPNE1-203ENST00000397442 PPIL4Q8WUA2 492 aaKnown RBP eCLIP33.5■■■□□ 2.95
CPNE1-203ENST00000397442 LRRC37AA6NMS7 1700 aa33.5■■■□□ 2.95
CPNE1-203ENST00000397442 C2CD5Q86YS7 1000 aa33.49■■■□□ 2.95
CPNE1-203ENST00000397442 EVI5LQ96CN4 794 aa33.48■■■□□ 2.95
CPNE1-203ENST00000397442 NDUFB9Q9Y6M9 179 aa33.48■■■□□ 2.95
CPNE1-203ENST00000397442 TTC39AQ5SRH9 613 aa33.48■■■□□ 2.95
CPNE1-203ENST00000397442 CCDC102BQ68D86 513 aa33.48■■■□□ 2.95
CPNE1-203ENST00000397442 ZNF512BQ96KM6 892 aaPredicted RBP33.48■■■□□ 2.95
CPNE1-203ENST00000397442 ATF5Q9Y2D1 282 aaPredicted RBP33.48■■■□□ 2.95
CPNE1-203ENST00000397442 PSDA5PKW4 1024 aaPredicted RBP33.47■■■□□ 2.95
CPNE1-203ENST00000397442 PHKA1P46020 1223 aa33.47■■■□□ 2.95
CPNE1-203ENST00000397442 EDC3Q96F86 508 aaKnown RBP33.47■■■□□ 2.95
CPNE1-203ENST00000397442 AKAP11Q9UKA4 1901 aa33.47■■■□□ 2.95
CPNE1-203ENST00000397442 H0YIN7 160 aa33.46■■■□□ 2.95
CPNE1-203ENST00000397442 ALDH1B1P30837 517 aa33.46■■■□□ 2.95
CPNE1-203ENST00000397442 SCARF1Q14162 830 aa33.46■■■□□ 2.95
CPNE1-203ENST00000397442 KIF13BQ9NQT8 1826 aa33.46■■■□□ 2.95
CPNE1-203ENST00000397442 STYK1Q6J9G0 422 aa33.45■■■□□ 2.95
CPNE1-203ENST00000397442 TMC4Q7Z404 712 aa33.45■■■□□ 2.95
CPNE1-203ENST00000397442 PPEF1O14829 653 aaPredicted RBP33.45■■■□□ 2.94
CPNE1-203ENST00000397442 CHMLP26374 656 aa33.45■■■□□ 2.94
CPNE1-203ENST00000397442 ARID4AP29374 1257 aaPredicted RBP33.45■■■□□ 2.94
CPNE1-203ENST00000397442 CHRNA5P30532 468 aa33.45■■■□□ 2.94
CPNE1-203ENST00000397442 DNAJC2Q99543 621 aaKnown RBP33.44■■■□□ 2.94
CPNE1-203ENST00000397442 XDHP47989 1333 aa33.44■■■□□ 2.94
CPNE1-203ENST00000397442 LTBP1Q14766 1721 aa33.44■■■□□ 2.94
CPNE1-203ENST00000397442 SP8Q8IXZ3 490 aa33.43■■■□□ 2.94
CPNE1-203ENST00000397442 ZNF804BA4D1E1 1349 aa33.43■■■□□ 2.94
CPNE1-203ENST00000397442 IRS2Q9Y4H2 1338 aa33.43■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms