RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 SERPINC1P01008 464 aa13.04□□□□□ -0.32
IFT140-202ENST00000397417 CCDC192P0DO97 292 aa13.04□□□□□ -0.32
IFT140-202ENST00000397417 METAP2P50579 478 aaKnown RBP eCLIP13.04□□□□□ -0.32
IFT140-202ENST00000397417 TSR1Q2NL82 804 aaKnown RBP13.04□□□□□ -0.32
IFT140-202ENST00000397417 CTCFLQ8NI51 663 aaPredicted RBP13.04□□□□□ -0.32
IFT140-202ENST00000397417 SAP30BPQ9UHR5 308 aaKnown RBP13.04□□□□□ -0.32
IFT140-202ENST00000397417 IARSP41252 1262 aaKnown RBP13.04□□□□□ -0.32
IFT140-202ENST00000397417 A0A0D9SFI3 127 aa13.03□□□□□ -0.32
IFT140-202ENST00000397417 ADORA1P30542 326 aa13.03□□□□□ -0.32
IFT140-202ENST00000397417 GYG1P46976 350 aa13.03□□□□□ -0.32
IFT140-202ENST00000397417 CDK5RAP3Q96JB5 506 aa13.03□□□□□ -0.32
IFT140-202ENST00000397417 PRC1O43663 620 aa13.03□□□□□ -0.32
IFT140-202ENST00000397417 KRT18P05783 430 aaKnown RBP13.03□□□□□ -0.32
IFT140-202ENST00000397417 TRAPPC3LQ5T215 181 aa13.03□□□□□ -0.32
IFT140-202ENST00000397417 WDR78Q5VTH9 848 aa13.03□□□□□ -0.32
IFT140-202ENST00000397417 CMTR1Q8N1G2 835 aaKnown RBP13.03□□□□□ -0.32
IFT140-202ENST00000397417 NCOA7Q8NI08 942 aa13.03□□□□□ -0.32
IFT140-202ENST00000397417 PIGBQ92521 554 aa13.03□□□□□ -0.32
IFT140-202ENST00000397417 ZNF830Q96NB3 372 aaPredicted RBP13.03□□□□□ -0.32
IFT140-202ENST00000397417 GREM2Q9H772 168 aa13.03□□□□□ -0.32
IFT140-202ENST00000397417 SEC31BQ9NQW1 1179 aa13.03□□□□□ -0.32
IFT140-202ENST00000397417 MCM9Q9NXL9 1143 aa13.03□□□□□ -0.32
IFT140-202ENST00000397417 KCNQ2O43526 872 aa13.02□□□□□ -0.32
IFT140-202ENST00000397417 RBM10P98175 930 aaKnown RBP13.02□□□□□ -0.32
IFT140-202ENST00000397417 ARHGEF10O15013 1369 aa13.02□□□□□ -0.32
IFT140-202ENST00000397417 FAM135BQ49AJ0 1406 aa13.02□□□□□ -0.33
IFT140-202ENST00000397417 TRIM37O94972 964 aa13.02□□□□□ -0.33
IFT140-202ENST00000397417 NAP1L1P55209 391 aaKnown RBP13.02□□□□□ -0.33
IFT140-202ENST00000397417 EPHA10Q5JZY3 1008 aa13.02□□□□□ -0.33
IFT140-202ENST00000397417 FSIP1Q8NA03 581 aa13.02□□□□□ -0.33
IFT140-202ENST00000397417 DNAJC5Q9H3Z4 198 aa13.02□□□□□ -0.33
IFT140-202ENST00000397417 CCDC87Q9NVE4 849 aa13.02□□□□□ -0.33
IFT140-202ENST00000397417 CFAP45Q9UL16 551 aa13.02□□□□□ -0.33
IFT140-202ENST00000397417 LOC102724428A0A0B4J2F2 783 aa13.02□□□□□ -0.33
IFT140-202ENST00000397417 ZNF853P0CG23 659 aa13.02□□□□□ -0.33
IFT140-202ENST00000397417 SIK1P57059 783 aa13.02□□□□□ -0.33
IFT140-202ENST00000397417 ERCC4Q92889 916 aaPredicted RBP13.02□□□□□ -0.33
IFT140-202ENST00000397417 SMARCC1Q92922 1105 aaPredicted RBP13.02□□□□□ -0.33
IFT140-202ENST00000397417 ZBTB9Q96C00 473 aa13.02□□□□□ -0.33
IFT140-202ENST00000397417 CCDC171Q6TFL3 1326 aa13.02□□□□□ -0.33
IFT140-202ENST00000397417 USP48Q86UV5 1035 aa13.01□□□□□ -0.33
IFT140-202ENST00000397417 CCDC191Q8NCU4 936 aa13.01□□□□□ -0.33
IFT140-202ENST00000397417 ZC3H12CQ9C0D7 883 aaKnown RBP13.01□□□□□ -0.33
IFT140-202ENST00000397417 TCIRG1Q13488 830 aa13.01□□□□□ -0.33
IFT140-202ENST00000397417 HOOK1Q9UJC3 728 aaKnown RBP13.01□□□□□ -0.33
IFT140-202ENST00000397417 RNF113AO15541 343 aaKnown RBP13.01□□□□□ -0.33
IFT140-202ENST00000397417 MCM5P33992 734 aa13.01□□□□□ -0.33
IFT140-202ENST00000397417 BCAMP50895 628 aa13.01□□□□□ -0.33
IFT140-202ENST00000397417 NLRP5P59047 1200 aa13.01□□□□□ -0.33
IFT140-202ENST00000397417 USPL1Q5W0Q7 1092 aa13.01□□□□□ -0.33
IFT140-202ENST00000397417 CNBD1Q8NA66 436 aa13.01□□□□□ -0.33
IFT140-202ENST00000397417 SH2B1Q9NRF2 756 aaPredicted RBP13.01□□□□□ -0.33
IFT140-202ENST00000397417 KIAA1210Q9ULL0 1709 aa13.01□□□□□ -0.33
IFT140-202ENST00000397417 JAK2O60674 1132 aa13□□□□□ -0.33
IFT140-202ENST00000397417 MAP3K11Q16584 847 aa13□□□□□ -0.33
IFT140-202ENST00000397417 SNX21Q969T3 373 aa13□□□□□ -0.33
IFT140-202ENST00000397417 TMX1Q9H3N1 280 aa13□□□□□ -0.33
IFT140-202ENST00000397417 AATFQ9NY61 560 aaKnown RBP eCLIP13□□□□□ -0.33
IFT140-202ENST00000397417 SRP68Q9UHB9 627 aaKnown RBP13□□□□□ -0.33
IFT140-202ENST00000397417 SNX14Q9Y5W7 946 aa13□□□□□ -0.33
IFT140-202ENST00000397417 MYOM1P52179 1685 aa13□□□□□ -0.33
IFT140-202ENST00000397417 SGSM2O43147 1006 aa13□□□□□ -0.33
IFT140-202ENST00000397417 APBA3O96018 575 aa13□□□□□ -0.33
IFT140-202ENST00000397417 CHGBP05060 677 aa13□□□□□ -0.33
IFT140-202ENST00000397417 CTDSPL2Q05D32 466 aa13□□□□□ -0.33
IFT140-202ENST00000397417 SSH3Q8TE77 659 aa13□□□□□ -0.33
IFT140-202ENST00000397417 CDKL5O76039 1030 aa12.99□□□□□ -0.33
IFT140-202ENST00000397417 TPM1P09493 284 aa12.99□□□□□ -0.33
IFT140-202ENST00000397417 RBM25P49756 843 aaKnown RBP12.99□□□□□ -0.33
IFT140-202ENST00000397417 ST5P78524 1137 aa12.99□□□□□ -0.33
IFT140-202ENST00000397417 WTAPQ15007 396 aa12.99□□□□□ -0.33
IFT140-202ENST00000397417 ENOX2Q16206 610 aaKnown RBP12.99□□□□□ -0.33
IFT140-202ENST00000397417 HLFQ16534 295 aa12.99□□□□□ -0.33
IFT140-202ENST00000397417 RASEFQ8IZ41 740 aa12.99□□□□□ -0.33
IFT140-202ENST00000397417 VEZTQ9HBM0 779 aa12.99□□□□□ -0.33
IFT140-202ENST00000397417 CFAP74Q9C0B2 1584 aa12.99□□□□□ -0.33
IFT140-202ENST00000397417 GPAA1O43292 621 aa12.99□□□□□ -0.33
IFT140-202ENST00000397417 ZBTB43O43298 467 aa12.99□□□□□ -0.33
IFT140-202ENST00000397417 SYT1P21579 422 aa12.99□□□□□ -0.33
IFT140-202ENST00000397417 JMYQ8N9B5 988 aa12.99□□□□□ -0.33
IFT140-202ENST00000397417 GPR101Q96P66 508 aaPredicted RBP12.99□□□□□ -0.33
IFT140-202ENST00000397417 DBNLQ9UJU6 430 aaKnown RBP12.99□□□□□ -0.33
IFT140-202ENST00000397417 CCDC47Q96A33 483 aaKnown RBP12.99□□□□□ -0.33
IFT140-202ENST00000397417 PLIN2Q99541 437 aa12.99□□□□□ -0.33
IFT140-202ENST00000397417 TMOD2Q9NZR1 351 aa12.99□□□□□ -0.33
IFT140-202ENST00000397417 GLI2P10070 1586 aa12.99□□□□□ -0.33
IFT140-202ENST00000397417 QRICH2Q9H0J4 1663 aa12.98□□□□□ -0.33
IFT140-202ENST00000397417 UFL1O94874 794 aa12.98□□□□□ -0.33
IFT140-202ENST00000397417 ANKRD20A12PQ8NF67 263 aa12.98□□□□□ -0.33
IFT140-202ENST00000397417 CPLX3Q8WVH0 158 aa12.98□□□□□ -0.33
IFT140-202ENST00000397417 ALG1Q9BT22 464 aa12.98□□□□□ -0.33
IFT140-202ENST00000397417 INO80Q9ULG1 1556 aaPredicted RBP12.98□□□□□ -0.33
IFT140-202ENST00000397417 ALKQ9UM73 1620 aa12.98□□□□□ -0.33
IFT140-202ENST00000397417 TTF1Q15361 905 aaPredicted RBP12.98□□□□□ -0.33
IFT140-202ENST00000397417 ADCK5Q3MIX3 580 aa12.98□□□□□ -0.33
IFT140-202ENST00000397417 CATIPQ7Z7H3 387 aa12.98□□□□□ -0.33
IFT140-202ENST00000397417 SDR42E1Q8WUS8 393 aa12.98□□□□□ -0.33
IFT140-202ENST00000397417 PHKBQ93100 1093 aa12.98□□□□□ -0.33
IFT140-202ENST00000397417 TTC41PQ6P2S7 1318 aa12.98□□□□□ -0.33
IFT140-202ENST00000397417 UQCRFS1P1P0C7P4 283 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms