RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 GNAI3P08754 354 aa31.81■■■□□ 2.68
TSPAN4-207ENST00000397411 WASHC4Q2M389 1173 aa31.81■■■□□ 2.68
TSPAN4-207ENST00000397411 MINPP1Q9UNW1 487 aa31.81■■■□□ 2.68
TSPAN4-207ENST00000397411 LRRC37AA6NMS7 1700 aa31.8■■■□□ 2.68
TSPAN4-207ENST00000397411 XDHP47989 1333 aa31.8■■■□□ 2.68
TSPAN4-207ENST00000397411 GLTPD2A6NH11 291 aa31.8■■■□□ 2.68
TSPAN4-207ENST00000397411 UFL1O94874 794 aa31.8■■■□□ 2.68
TSPAN4-207ENST00000397411 RIMBP2O15034 1052 aa31.79■■■□□ 2.68
TSPAN4-207ENST00000397411 EIF6P56537 245 aaKnown RBP31.79■■■□□ 2.68
TSPAN4-207ENST00000397411 TMEM57Q8N5G2 664 aa31.79■■■□□ 2.68
TSPAN4-207ENST00000397411 TBC1D16Q8TBP0 767 aa31.79■■■□□ 2.68
TSPAN4-207ENST00000397411 PODXL2Q9NZ53 605 aa31.79■■■□□ 2.68
TSPAN4-207ENST00000397411 POLLQ9UGP5 575 aa31.79■■■□□ 2.68
TSPAN4-207ENST00000397411 G3V3G9 751 aa31.78■■■□□ 2.68
TSPAN4-207ENST00000397411 MS4A1P11836 297 aa31.78■■■□□ 2.68
TSPAN4-207ENST00000397411 ATP2B4P23634 1241 aa31.78■■■□□ 2.68
TSPAN4-207ENST00000397411 DCAF8Q5TAQ9 597 aa31.78■■■□□ 2.68
TSPAN4-207ENST00000397411 LDHAL6AQ6ZMR3 332 aa31.78■■■□□ 2.68
TSPAN4-207ENST00000397411 ZNF594Q96JF6 807 aaPredicted RBP31.78■■■□□ 2.68
TSPAN4-207ENST00000397411 MEIS3Q99687 375 aa31.78■■■□□ 2.68
TSPAN4-207ENST00000397411 ZC3H12CQ9C0D7 883 aaKnown RBP31.78■■■□□ 2.68
TSPAN4-207ENST00000397411 ANKRD2Q9GZV1 360 aa31.78■■■□□ 2.68
TSPAN4-207ENST00000397411 CNNM1Q9NRU3 951 aa31.78■■■□□ 2.68
TSPAN4-207ENST00000397411 KIAA2012Q0VF49 1180 aa31.77■■■□□ 2.68
TSPAN4-207ENST00000397411 ANKRD44Q8N8A2 993 aa31.77■■■□□ 2.68
TSPAN4-207ENST00000397411 RABL6Q3YEC7 729 aaPredicted RBP31.76■■■□□ 2.67
TSPAN4-207ENST00000397411 ITPRIPQ8IWB1 547 aa31.75■■■□□ 2.67
TSPAN4-207ENST00000397411 RRAGCQ9HB90 399 aa31.75■■■□□ 2.67
TSPAN4-207ENST00000397411 LRRFIP2Q9Y608 721 aaKnown RBP31.75■■■□□ 2.67
TSPAN4-207ENST00000397411 FZD9O00144 591 aa31.74■■■□□ 2.67
TSPAN4-207ENST00000397411 KCNJ4P48050 445 aa31.74■■■□□ 2.67
TSPAN4-207ENST00000397411 GPR101Q96P66 508 aaPredicted RBP31.74■■■□□ 2.67
TSPAN4-207ENST00000397411 DDNO94850 711 aaPredicted RBP31.73■■■□□ 2.67
TSPAN4-207ENST00000397411 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.73■■■□□ 2.67
TSPAN4-207ENST00000397411 NMRK2Q9NPI5 230 aa31.73■■■□□ 2.67
TSPAN4-207ENST00000397411 ZNRF3Q9ULT6 936 aa31.73■■■□□ 2.67
TSPAN4-207ENST00000397411 PLIN1O60240 522 aa31.72■■■□□ 2.67
TSPAN4-207ENST00000397411 CHRNDQ07001 517 aa31.72■■■□□ 2.67
TSPAN4-207ENST00000397411 GJA3Q9Y6H8 435 aa31.72■■■□□ 2.67
TSPAN4-207ENST00000397411 LEMD3Q9Y2U8 911 aa31.71■■■□□ 2.67
TSPAN4-207ENST00000397411 ZNF541Q9H0D2 1346 aa31.71■■■□□ 2.67
TSPAN4-207ENST00000397411 GNAI2P04899 355 aa31.7■■■□□ 2.67
TSPAN4-207ENST00000397411 DOK7Q18PE1 504 aa31.7■■■□□ 2.67
TSPAN4-207ENST00000397411 C16orf71Q8IYS4 520 aaPredicted RBP31.7■■■□□ 2.67
TSPAN4-207ENST00000397411 HELBQ8NG08 1087 aaPredicted RBP31.7■■■□□ 2.67
TSPAN4-207ENST00000397411 PANK1Q8TE04 598 aa31.7■■■□□ 2.67
TSPAN4-207ENST00000397411 DUOX1Q9NRD9 1551 aa31.69■■■□□ 2.66
TSPAN4-207ENST00000397411 RLBP1P12271 317 aa31.69■■■□□ 2.66
TSPAN4-207ENST00000397411 DBNDD1Q9H9R9 158 aa31.69■■■□□ 2.66
TSPAN4-207ENST00000397411 TAF5LO75529 589 aa31.67■■■□□ 2.66
TSPAN4-207ENST00000397411 VEGFAP15692 232 aaPredicted RBP31.67■■■□□ 2.66
TSPAN4-207ENST00000397411 GPC2Q8N158 579 aa31.67■■■□□ 2.66
TSPAN4-207ENST00000397411 ZNF804BA4D1E1 1349 aa31.67■■■□□ 2.66
TSPAN4-207ENST00000397411 PUS3Q9BZE2 481 aaKnown RBP31.66■■■□□ 2.66
TSPAN4-207ENST00000397411 COL4A5P29400 1685 aa31.66■■■□□ 2.66
TSPAN4-207ENST00000397411 LTBP1Q14766 1721 aa31.66■■■□□ 2.66
TSPAN4-207ENST00000397411 TNIP1Q15025 636 aa31.65■■■□□ 2.66
TSPAN4-207ENST00000397411 KLHDC4Q8TBB5 520 aa31.65■■■□□ 2.66
TSPAN4-207ENST00000397411 ECE2O60344 883 aa31.64■■■□□ 2.66
TSPAN4-207ENST00000397411 RAD17O75943 681 aa31.64■■■□□ 2.66
TSPAN4-207ENST00000397411 CIAPIN1Q6FI81 312 aa31.64■■■□□ 2.66
TSPAN4-207ENST00000397411 WTIPA6NIX2 430 aaPredicted RBP31.63■■■□□ 2.65
TSPAN4-207ENST00000397411 CXCL9Q07325 125 aa31.63■■■□□ 2.65
TSPAN4-207ENST00000397411 MROH5Q6ZUA9 1318 aa31.63■■■□□ 2.65
TSPAN4-207ENST00000397411 KIF3CO14782 793 aa31.62■■■□□ 2.65
TSPAN4-207ENST00000397411 LRRC24Q50LG9 513 aa31.62■■■□□ 2.65
TSPAN4-207ENST00000397411 METTL24Q5JXM2 366 aa31.62■■■□□ 2.65
TSPAN4-207ENST00000397411 RIPOR2Q9Y4F9 1068 aa31.62■■■□□ 2.65
TSPAN4-207ENST00000397411 IQCA1LA6NCM1 817 aa31.61■■■□□ 2.65
TSPAN4-207ENST00000397411 SRGAP3O43295 1099 aa31.61■■■□□ 2.65
TSPAN4-207ENST00000397411 MED23Q9ULK4 1368 aa31.6■■■□□ 2.65
TSPAN4-207ENST00000397411 ZBTB7BO15156 539 aaPredicted RBP31.6■■■□□ 2.65
TSPAN4-207ENST00000397411 LMOD1P29536 600 aaPredicted RBP31.6■■■□□ 2.65
TSPAN4-207ENST00000397411 RFX5P48382 616 aaPredicted RBP31.6■■■□□ 2.65
TSPAN4-207ENST00000397411 YDJCA8MPS7 323 aa31.59■■■□□ 2.65
TSPAN4-207ENST00000397411 EYA2O00167 538 aa31.59■■■□□ 2.65
TSPAN4-207ENST00000397411 PTPN12Q05209 780 aaKnown RBP31.59■■■□□ 2.65
TSPAN4-207ENST00000397411 L3MBTL3Q96JM7 780 aaPredicted RBP31.59■■■□□ 2.65
TSPAN4-207ENST00000397411 SIL1Q9H173 461 aa31.59■■■□□ 2.65
TSPAN4-207ENST00000397411 COG6Q9Y2V7 657 aa31.59■■■□□ 2.65
TSPAN4-207ENST00000397411 WDR90Q96KV7 1748 aa31.58■■■□□ 2.65
TSPAN4-207ENST00000397411 HACL1Q9UJ83 578 aa31.58■■■□□ 2.65
TSPAN4-207ENST00000397411 SNAP23O00161 211 aa31.57■■■□□ 2.64
TSPAN4-207ENST00000397411 MVPQ14764 893 aaKnown RBP31.57■■■□□ 2.64
TSPAN4-207ENST00000397411 CHMP4BQ9H444 224 aaKnown RBP31.57■■■□□ 2.64
TSPAN4-207ENST00000397411 POTECB2RU33 542 aa31.56■■■□□ 2.64
TSPAN4-207ENST00000397411 PDE3AQ14432 1141 aa31.56■■■□□ 2.64
TSPAN4-207ENST00000397411 PODNQ7Z5L7 613 aa31.56■■■□□ 2.64
TSPAN4-207ENST00000397411 COA1Q9GZY4 146 aa31.56■■■□□ 2.64
TSPAN4-207ENST00000397411 C1orf115Q9H7X2 142 aa31.56■■■□□ 2.64
TSPAN4-207ENST00000397411 DDX19BQ9UMR2 479 aa31.56■■■□□ 2.64
TSPAN4-207ENST00000397411 TOMM70O94826 608 aa31.55■■■□□ 2.64
TSPAN4-207ENST00000397411 UBE4AQ14139 1066 aa31.55■■■□□ 2.64
TSPAN4-207ENST00000397411 TXNRD3Q86VQ6 643 aa31.55■■■□□ 2.64
TSPAN4-207ENST00000397411 KCNQ5Q9NR82 932 aa31.55■■■□□ 2.64
TSPAN4-207ENST00000397411 FBXO3Q9UK99 471 aa31.55■■■□□ 2.64
TSPAN4-207ENST00000397411 PSMD14O00487 310 aa31.54■■■□□ 2.64
TSPAN4-207ENST00000397411 KLRK1P26718 216 aa31.54■■■□□ 2.64
TSPAN4-207ENST00000397411 MTX1Q13505 466 aa31.54■■■□□ 2.64
TSPAN4-207ENST00000397411 FBXW7Q969H0 707 aa31.54■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms