RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 TSPY26PQ9H489 355 aa28.24■■■□□ 2.11
PABPN1-202ENST00000397276 UQCRHLA0A096LP55 91 aa28.23■■■□□ 2.11
PABPN1-202ENST00000397276 UQCRHP07919 91 aa28.23■■■□□ 2.11
PABPN1-202ENST00000397276 CDC37L1Q7L3B6 337 aa28.23■■■□□ 2.11
PABPN1-202ENST00000397276 ZKSCAN5Q9Y2L8 839 aa28.23■■■□□ 2.11
PABPN1-202ENST00000397276 MPNDQ8N594 471 aa28.23■■■□□ 2.11
PABPN1-202ENST00000397276 TMEM87AQ8NBN3 555 aa28.23■■■□□ 2.11
PABPN1-202ENST00000397276 SYTL4Q96C24 671 aaPredicted RBP28.23■■■□□ 2.11
PABPN1-202ENST00000397276 JCADQ9P266 1359 aa28.23■■■□□ 2.11
PABPN1-202ENST00000397276 GPTP24298 496 aa28.22■■■□□ 2.11
PABPN1-202ENST00000397276 FKBP4Q02790 459 aaKnown RBP eCLIP28.22■■■□□ 2.113e-10■■□□□ 11.7
PABPN1-202ENST00000397276 ISCA1Q9BUE6 129 aa28.22■■■□□ 2.11
PABPN1-202ENST00000397276 U3KPZ7 1027 aaPredicted RBP28.22■■■□□ 2.11
PABPN1-202ENST00000397276 TSGA10IPQ3SY00 556 aa28.22■■■□□ 2.11
PABPN1-202ENST00000397276 ATG3Q9NT62 314 aa28.22■■■□□ 2.11
PABPN1-202ENST00000397276 CEP126Q9P2H0 1117 aa28.22■■■□□ 2.11
PABPN1-202ENST00000397276 KDM4FA0A1W2PPD8 638 aa28.22■■■□□ 2.11
PABPN1-202ENST00000397276 HSP90B1P14625 803 aaKnown RBP28.22■■■□□ 2.11
PABPN1-202ENST00000397276 UBE2HP62256 183 aa28.22■■■□□ 2.11
PABPN1-202ENST00000397276 KIF6Q6ZMV9 814 aa28.22■■■□□ 2.11
PABPN1-202ENST00000397276 Q6ZUG5 572 aa28.22■■■□□ 2.11
PABPN1-202ENST00000397276 A0A0G2JLW4 131 aa28.21■■■□□ 2.11
PABPN1-202ENST00000397276 KRT32Q14532 448 aa28.21■■■□□ 2.11
PABPN1-202ENST00000397276 FGD1P98174 961 aa28.2■■■□□ 2.11
PABPN1-202ENST00000397276 TAF7LQ5H9L4 462 aa28.2■■■□□ 2.11
PABPN1-202ENST00000397276 GORABQ5T7V8 394 aa28.2■■■□□ 2.11
PABPN1-202ENST00000397276 TNS2Q63HR2 1409 aa28.2■■■□□ 2.1
PABPN1-202ENST00000397276 ADORA1P30542 326 aa28.19■■■□□ 2.1
PABPN1-202ENST00000397276 STRCQ7RTU9 1775 aa28.19■■■□□ 2.1
PABPN1-202ENST00000397276 HLFQ16534 295 aa28.19■■■□□ 2.1
PABPN1-202ENST00000397276 GPR108Q9NPR9 543 aa28.19■■■□□ 2.1
PABPN1-202ENST00000397276 UBR2Q8IWV8 1755 aa28.18■■■□□ 2.1
PABPN1-202ENST00000397276 JAK2O60674 1132 aa28.18■■■□□ 2.1
PABPN1-202ENST00000397276 STOX1Q6ZVD7 989 aa28.18■■■□□ 2.1
PABPN1-202ENST00000397276 PHF14O94880 888 aa28.18■■■□□ 2.1
PABPN1-202ENST00000397276 KAT6BQ8WYB5 2073 aa28.18■■■□□ 2.1
PABPN1-202ENST00000397276 STARD3NLO95772 234 aa28.17■■■□□ 2.1
PABPN1-202ENST00000397276 BRF1Q92994 677 aa28.17■■■□□ 2.1
PABPN1-202ENST00000397276 CCDC183Q5T5S1 534 aa28.17■■■□□ 2.1
PABPN1-202ENST00000397276 TERF1P54274 439 aa28.16■■■□□ 2.1
PABPN1-202ENST00000397276 A0A0G2JS52 829 aa28.16■■■□□ 2.1
PABPN1-202ENST00000397276 DDX11Q96FC9 970 aa28.16■■■□□ 2.1
PABPN1-202ENST00000397276 ALDH8A1Q9H2A2 487 aaPredicted RBP28.16■■■□□ 2.1
PABPN1-202ENST00000397276 NUP188Q5SRE5 1749 aa28.16■■■□□ 2.1
PABPN1-202ENST00000397276 SH3TC1Q8TE82 1336 aa28.16■■■□□ 2.1
PABPN1-202ENST00000397276 CIAO1O76071 339 aa28.15■■■□□ 2.1
PABPN1-202ENST00000397276 TJP1Q07157 1748 aa28.15■■■□□ 2.1
PABPN1-202ENST00000397276 TTC39AQ5SRH9 613 aa28.15■■■□□ 2.1
PABPN1-202ENST00000397276 XAGE2Q96GT9 111 aa28.15■■■□□ 2.1
PABPN1-202ENST00000397276 HELLSQ9NRZ9 838 aa28.15■■■□□ 2.1
PABPN1-202ENST00000397276 RFX7Q2KHR2 1363 aa28.14■■■□□ 2.1
PABPN1-202ENST00000397276 SHANK3Q9BYB0 1731 aa28.14■■■□□ 2.1
PABPN1-202ENST00000397276 IFIT5Q13325 482 aaKnown RBP28.14■■■□□ 2.1
PABPN1-202ENST00000397276 ZMYM1Q5SVZ6 1142 aa28.14■■■□□ 2.1
PABPN1-202ENST00000397276 CHST3Q7LGC8 479 aa28.14■■■□□ 2.1
PABPN1-202ENST00000397276 TFIP11Q9UBB9 837 aaKnown RBP28.14■■■□□ 2.1
PABPN1-202ENST00000397276 PPFIA3O75145 1194 aa28.14■■■□□ 2.09
PABPN1-202ENST00000397276 HSPD1P10809 573 aaKnown RBP28.14■■■□□ 2.09
PABPN1-202ENST00000397276 PDCP20941 246 aa28.14■■■□□ 2.09
PABPN1-202ENST00000397276 TEX13AQ9BXU3 409 aaPredicted RBP28.14■■■□□ 2.09
PABPN1-202ENST00000397276 PALLDQ8WX93 1383 aa28.14■■■□□ 2.09
PABPN1-202ENST00000397276 HSP90AB3PQ58FF7 597 aa28.13■■■□□ 2.09
PABPN1-202ENST00000397276 CCDC158Q5M9N0 1113 aa28.13■■■□□ 2.09
PABPN1-202ENST00000397276 GIMAP6Q6P9H5 292 aa28.13■■■□□ 2.09
PABPN1-202ENST00000397276 SLC4A9Q96Q91 983 aa28.13■■■□□ 2.09
PABPN1-202ENST00000397276 NAP1L2Q9ULW6 460 aaPredicted RBP28.13■■■□□ 2.09
PABPN1-202ENST00000397276 RNF113AO15541 343 aaKnown RBP28.13■■■□□ 2.09
PABPN1-202ENST00000397276 ZBTB38Q8NAP3 1195 aaPredicted RBP28.13■■■□□ 2.09
PABPN1-202ENST00000397276 GTF3C6Q969F1 213 aa28.13■■■□□ 2.09
PABPN1-202ENST00000397276 MAST3O60307 1309 aa28.13■■■□□ 2.09
PABPN1-202ENST00000397276 PCCAP05165 728 aaPredicted RBP28.12■■■□□ 2.09
PABPN1-202ENST00000397276 SCARF1Q14162 830 aa28.12■■■□□ 2.09
PABPN1-202ENST00000397276 TTLL5Q6EMB2 1281 aa28.12■■■□□ 2.09
PABPN1-202ENST00000397276 PI16Q6UXB8 463 aa28.12■■■□□ 2.09
PABPN1-202ENST00000397276 M0R2C6 588 aa28.12■■■□□ 2.09
PABPN1-202ENST00000397276 TTC6Q86TZ1 520 aa28.12■■■□□ 2.09
PABPN1-202ENST00000397276 TOGARAM1Q9Y4F4 1720 aa28.12■■■□□ 2.09
PABPN1-202ENST00000397276 FOSBP53539 338 aa28.11■■■□□ 2.09
PABPN1-202ENST00000397276 CSPP1Q1MSJ5 1256 aa28.11■■■□□ 2.09
PABPN1-202ENST00000397276 WASHC4Q2M389 1173 aa28.11■■■□□ 2.09
PABPN1-202ENST00000397276 KRT85P78386 507 aa28.11■■■□□ 2.09
PABPN1-202ENST00000397276 OSBP2Q969R2 916 aa28.11■■■□□ 2.09
PABPN1-202ENST00000397276 MAP3K15Q6ZN16 1313 aa28.11■■■□□ 2.09
PABPN1-202ENST00000397276 GIGYF2Q6Y7W6 1299 aaKnown RBP28.11■■■□□ 2.09
PABPN1-202ENST00000397276 CCDC39Q9UFE4 941 aa28.11■■■□□ 2.09
PABPN1-202ENST00000397276 ZBTB1Q9Y2K1 713 aa28.11■■■□□ 2.09
PABPN1-202ENST00000397276 PAPPAQ13219 1627 aa28.1■■■□□ 2.09
PABPN1-202ENST00000397276 ABCA3Q99758 1704 aa28.1■■■□□ 2.09
PABPN1-202ENST00000397276 APOBRQ0VD83 1088 aa28.1■■■□□ 2.09
PABPN1-202ENST00000397276 TBC1D2BQ9UPU7 963 aa28.1■■■□□ 2.09
PABPN1-202ENST00000397276 HCLS1P14317 486 aaPredicted RBP28.1■■■□□ 2.09
PABPN1-202ENST00000397276 SCRN1Q12765 414 aa28.1■■■□□ 2.09
PABPN1-202ENST00000397276 TRIM28Q13263 835 aaKnown RBP28.1■■■□□ 2.09
PABPN1-202ENST00000397276 GREM2Q9H772 168 aa28.1■■■□□ 2.09
PABPN1-202ENST00000397276 ZNF830Q96NB3 372 aaPredicted RBP28.09■■■□□ 2.09
PABPN1-202ENST00000397276 DSCC1Q9BVC3 393 aa28.09■■■□□ 2.09
PABPN1-202ENST00000397276 LDHAL6AQ6ZMR3 332 aa28.09■■■□□ 2.09
PABPN1-202ENST00000397276 AKAP2Q9Y2D5 859 aa28.09■■■□□ 2.09
PABPN1-202ENST00000397276 PTMAP06454 111 aaKnown RBP28.08■■■□□ 2.09
PABPN1-202ENST00000397276 ZAP70P43403 619 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms