RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 PRAM1Q96QH2 718 aa13.98□□□□□ -0.17
SMU1-201ENST00000397149 GOLGA6L9A6NEM1 432 aa13.98□□□□□ -0.17
SMU1-201ENST00000397149 KRT5P13647 590 aa13.98□□□□□ -0.17
SMU1-201ENST00000397149 STX1AQ16623 288 aa13.98□□□□□ -0.17
SMU1-201ENST00000397149 IARSP41252 1262 aaKnown RBP13.98□□□□□ -0.17
SMU1-201ENST00000397149 ZNF853P0CG23 659 aa13.98□□□□□ -0.17
SMU1-201ENST00000397149 AAMPQ13685 434 aa13.98□□□□□ -0.17
SMU1-201ENST00000397149 PKD2L1Q9P0L9 805 aa13.98□□□□□ -0.17
SMU1-201ENST00000397149 VPS18Q9P253 973 aa13.98□□□□□ -0.17
SMU1-201ENST00000397149 CAPN2P17655 700 aa13.97□□□□□ -0.17
SMU1-201ENST00000397149 UBASH3AP57075 661 aa13.97□□□□□ -0.17
SMU1-201ENST00000397149 USP37Q86T82 979 aa13.97□□□□□ -0.17
SMU1-201ENST00000397149 RNF41Q9H4P4 317 aaPredicted RBP13.97□□□□□ -0.17
SMU1-201ENST00000397149 GINS2Q9Y248 185 aa13.97□□□□□ -0.17
SMU1-201ENST00000397149 CTAGE15A4D2H0 777 aa13.97□□□□□ -0.17
SMU1-201ENST00000397149 CTAGE8P0CG41 777 aa13.97□□□□□ -0.17
SMU1-201ENST00000397149 KMT5BQ4FZB7 885 aa13.97□□□□□ -0.17
SMU1-201ENST00000397149 CCDC122Q5T0U0 273 aa13.97□□□□□ -0.17
SMU1-201ENST00000397149 NAA16Q6N069 864 aaPredicted RBP13.97□□□□□ -0.17
SMU1-201ENST00000397149 CTAGE6Q86UF2 777 aa13.97□□□□□ -0.17
SMU1-201ENST00000397149 CTAGE4Q8IX94 777 aa13.97□□□□□ -0.17
SMU1-201ENST00000397149 CPSF2Q9P2I0 782 aaKnown RBP13.97□□□□□ -0.17
SMU1-201ENST00000397149 ZNF131P52739 623 aa13.97□□□□□ -0.17
SMU1-201ENST00000397149 MAN1A1P33908 653 aa13.97□□□□□ -0.17
SMU1-201ENST00000397149 VCX3BQ9H321 246 aa13.97□□□□□ -0.17
SMU1-201ENST00000397149 SFMBT1Q9UHJ3 866 aa13.97□□□□□ -0.17
SMU1-201ENST00000397149 DNAI1Q9UI46 699 aa13.97□□□□□ -0.17
SMU1-201ENST00000397149 ARHGEF2Q92974 986 aaKnown RBP13.97□□□□□ -0.17
SMU1-201ENST00000397149 SAMD15Q9P1V8 674 aa13.97□□□□□ -0.17
SMU1-201ENST00000397149 RBM27Q9P2N5 1060 aaKnown RBP13.97□□□□□ -0.17
SMU1-201ENST00000397149 CYLC1P35663 651 aaPredicted RBP13.97□□□□□ -0.17
SMU1-201ENST00000397149 GSDMDP57764 484 aa13.97□□□□□ -0.17
SMU1-201ENST00000397149 ERMNQ8TAM6 284 aa13.97□□□□□ -0.17
SMU1-201ENST00000397149 CXorf38Q8TB03 319 aa13.97□□□□□ -0.17
SMU1-201ENST00000397149 RABEP2Q9H5N1 569 aa13.97□□□□□ -0.17
SMU1-201ENST00000397149 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.97□□□□□ -0.17
SMU1-201ENST00000397149 OPA1O60313 960 aa13.96□□□□□ -0.17
SMU1-201ENST00000397149 FAM204AQ9H8W3 233 aa13.96□□□□□ -0.17
SMU1-201ENST00000397149 VEZTQ9HBM0 779 aa13.96□□□□□ -0.17
SMU1-201ENST00000397149 INPP1P49441 399 aa13.96□□□□□ -0.17
SMU1-201ENST00000397149 PDE4BQ07343 736 aa13.96□□□□□ -0.17
SMU1-201ENST00000397149 NOD1Q9Y239 953 aa13.96□□□□□ -0.17
SMU1-201ENST00000397149 GOLIM4O00461 696 aa13.96□□□□□ -0.18
SMU1-201ENST00000397149 METAP2P50579 478 aaKnown RBP eCLIP13.96□□□□□ -0.18
SMU1-201ENST00000397149 LACTBP83111 547 aaPredicted RBP13.96□□□□□ -0.18
SMU1-201ENST00000397149 CLUL1Q15846 466 aa13.96□□□□□ -0.18
SMU1-201ENST00000397149 SPOUT1Q5T280 376 aaKnown RBP13.96□□□□□ -0.18
SMU1-201ENST00000397149 JARID2Q92833 1246 aaPredicted RBP13.96□□□□□ -0.18
SMU1-201ENST00000397149 SPDYE16A6NNV3 312 aaPredicted RBP13.95□□□□□ -0.18
SMU1-201ENST00000397149 RHOXF2BP0C7M4 288 aa13.95□□□□□ -0.18
SMU1-201ENST00000397149 TSPY3P0CV98 308 aa13.95□□□□□ -0.18
SMU1-201ENST00000397149 TSPY8P0CW00 308 aa13.95□□□□□ -0.18
SMU1-201ENST00000397149 GJB2P29033 226 aa13.95□□□□□ -0.18
SMU1-201ENST00000397149 SPDYE2Q495Y8 402 aa13.95□□□□□ -0.18
SMU1-201ENST00000397149 USHBP1Q8N6Y0 703 aa13.95□□□□□ -0.18
SMU1-201ENST00000397149 CHMP6Q96FZ7 201 aa13.95□□□□□ -0.18
SMU1-201ENST00000397149 RSRC1Q96IZ7 334 aaKnown RBP13.95□□□□□ -0.18
SMU1-201ENST00000397149 RHOXF2Q9BQY4 288 aa13.95□□□□□ -0.18
SMU1-201ENST00000397149 TDRD9Q8NDG6 1382 aaKnown RBP13.95□□□□□ -0.18
SMU1-201ENST00000397149 CTAGE5O15320 804 aa13.95□□□□□ -0.18
SMU1-201ENST00000397149 EHBP1Q8NDI1 1231 aa13.95□□□□□ -0.18
SMU1-201ENST00000397149 RNASE9P60153 205 aaKnown RBP13.95□□□□□ -0.18
SMU1-201ENST00000397149 TTC31Q49AM3 519 aaPredicted RBP13.95□□□□□ -0.18
SMU1-201ENST00000397149 C4orf50Q6ZRC1 276 aa13.95□□□□□ -0.18
SMU1-201ENST00000397149 ARFGAP3Q9NP61 516 aa13.95□□□□□ -0.18
SMU1-201ENST00000397149 IQSEC3Q9UPP2 1182 aaPredicted RBP13.95□□□□□ -0.18
SMU1-201ENST00000397149 ASIC1P78348 528 aa13.95□□□□□ -0.18
SMU1-201ENST00000397149 MAP7Q14244 749 aa13.95□□□□□ -0.18
SMU1-201ENST00000397149 HPDP32754 393 aaPredicted RBP13.95□□□□□ -0.18
SMU1-201ENST00000397149 PLIN2Q99541 437 aa13.95□□□□□ -0.18
SMU1-201ENST00000397149 IGSF3O75054 1194 aa13.95□□□□□ -0.18
SMU1-201ENST00000397149 MFSD6Q6ZSS7 791 aa13.95□□□□□ -0.18
SMU1-201ENST00000397149 C10orf67Q8IYJ2 551 aa13.95□□□□□ -0.18
SMU1-201ENST00000397149 SMARCC2Q8TAQ2 1214 aa13.95□□□□□ -0.18
SMU1-201ENST00000397149 LEO1Q8WVC0 666 aaPredicted RBP13.95□□□□□ -0.18
SMU1-201ENST00000397149 KARSQ15046 597 aaKnown RBP13.94□□□□□ -0.18
SMU1-201ENST00000397149 TMTC4Q5T4D3 741 aa13.94□□□□□ -0.18
SMU1-201ENST00000397149 PSPC1Q8WXF1 523 aaKnown RBP13.94□□□□□ -0.18
SMU1-201ENST00000397149 KIF1BPQ96EK5 621 aa13.94□□□□□ -0.18
SMU1-201ENST00000397149 XAB2Q9HCS7 855 aaKnown RBP13.94□□□□□ -0.18
SMU1-201ENST00000397149 ORC3Q9UBD5 711 aaPredicted RBP13.94□□□□□ -0.18
SMU1-201ENST00000397149 A0A1B0GUL7 405 aa13.94□□□□□ -0.18
SMU1-201ENST00000397149 SSFA2P28290 1259 aa13.94□□□□□ -0.18
SMU1-201ENST00000397149 TSTA3Q13630 321 aaPredicted RBP13.94□□□□□ -0.18
SMU1-201ENST00000397149 RAPGEF1Q13905 1077 aa13.94□□□□□ -0.18
SMU1-201ENST00000397149 CCDC102BQ68D86 513 aa13.94□□□□□ -0.18
SMU1-201ENST00000397149 RAB3IPQ96QF0 476 aaPredicted RBP13.94□□□□□ -0.18
SMU1-201ENST00000397149 BAG3O95817 575 aa13.94□□□□□ -0.18
SMU1-201ENST00000397149 MX1P20591 662 aa13.94□□□□□ -0.18
SMU1-201ENST00000397149 ATP6V1E1P36543 226 aa13.94□□□□□ -0.18
SMU1-201ENST00000397149 ATP11AP98196 1134 aa13.94□□□□□ -0.18
SMU1-201ENST00000397149 ERCC6LQ2NKX8 1250 aa13.94□□□□□ -0.18
SMU1-201ENST00000397149 XRCC6P12956 609 aaKnown RBP eCLIP13.94□□□□□ -0.18
SMU1-201ENST00000397149 ITIH3Q06033 890 aa13.94□□□□□ -0.18
SMU1-201ENST00000397149 PRPHP41219 470 aa13.93□□□□□ -0.18
SMU1-201ENST00000397149 DCAF17Q5H9S7 520 aaPredicted RBP13.93□□□□□ -0.18
SMU1-201ENST00000397149 STMN1P16949 149 aa13.93□□□□□ -0.18
SMU1-201ENST00000397149 CABP1Q9NZU7 370 aa13.93□□□□□ -0.18
SMU1-201ENST00000397149 BACH1O14867 736 aa13.93□□□□□ -0.18
SMU1-201ENST00000397149 CDK19Q9BWU1 502 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms