RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 ADM5C9JUS6 153 aa17.65■□□□□ 0.42
SEC13-205ENST00000397101 ECE2O60344 883 aa17.65■□□□□ 0.42
SEC13-205ENST00000397101 TRPA1O75762 1119 aa17.65■□□□□ 0.42
SEC13-205ENST00000397101 VIL1P09327 827 aaKnown RBP17.65■□□□□ 0.42
SEC13-205ENST00000397101 FKBP1BP68106 108 aa17.65■□□□□ 0.42
SEC13-205ENST00000397101 LMOD3Q0VAK6 560 aa17.65■□□□□ 0.42
SEC13-205ENST00000397101 PRPF38BQ5VTL8 546 aaKnown RBP17.65■□□□□ 0.42
SEC13-205ENST00000397101 DLK2Q6UY11 383 aa17.65■□□□□ 0.42
SEC13-205ENST00000397101 CTU1Q7Z7A3 348 aaKnown RBP17.65■□□□□ 0.42
SEC13-205ENST00000397101 SULF1Q8IWU6 871 aa17.65■□□□□ 0.42
SEC13-205ENST00000397101 NECTIN2Q92692 538 aa17.65■□□□□ 0.42
SEC13-205ENST00000397101 CELF1Q92879 486 aaKnown RBP17.65■□□□□ 0.42
SEC13-205ENST00000397101 AIMP1Q12904 312 aaKnown RBP17.64■□□□□ 0.41
SEC13-205ENST00000397101 KIF4BQ2VIQ3 1234 aa17.64■□□□□ 0.41
SEC13-205ENST00000397101 ISCA1Q9BUE6 129 aa17.64■□□□□ 0.41
SEC13-205ENST00000397101 PODXL2Q9NZ53 605 aa17.64■□□□□ 0.41
SEC13-205ENST00000397101 C6orf229H3BNL8 230 aa17.63■□□□□ 0.41
SEC13-205ENST00000397101 SOX10P56693 466 aa17.63■□□□□ 0.41
SEC13-205ENST00000397101 RIPK4P57078 832 aa17.63■□□□□ 0.41
SEC13-205ENST00000397101 TRIM28Q13263 835 aaKnown RBP17.63■□□□□ 0.41
SEC13-205ENST00000397101 PKN2Q16513 984 aaKnown RBP17.63■□□□□ 0.41
SEC13-205ENST00000397101 PLBD2Q8NHP8 589 aa17.63■□□□□ 0.41
SEC13-205ENST00000397101 TBC1D16Q8TBP0 767 aa17.63■□□□□ 0.41
SEC13-205ENST00000397101 DDX60Q8IY21 1712 aaKnown RBP17.63■□□□□ 0.41
SEC13-205ENST00000397101 RIMBP2O15034 1052 aa17.62■□□□□ 0.41
SEC13-205ENST00000397101 HOXB7P09629 217 aa17.62■□□□□ 0.41
SEC13-205ENST00000397101 ZNF280AP59817 542 aaPredicted RBP17.62■□□□□ 0.41
SEC13-205ENST00000397101 GPSM2P81274 684 aa17.62■□□□□ 0.41
SEC13-205ENST00000397101 AGBL3Q8NEM8 1001 aa17.62■□□□□ 0.41
SEC13-205ENST00000397101 GGA3Q9NZ52 723 aa17.62■□□□□ 0.41
SEC13-205ENST00000397101 AKAP11Q9UKA4 1901 aa17.62■□□□□ 0.41
SEC13-205ENST00000397101 POLR2AP24928 1970 aaKnown RBP17.61■□□□□ 0.41
SEC13-205ENST00000397101 RPS8P62241 208 aaKnown RBP17.61■□□□□ 0.41
SEC13-205ENST00000397101 NOM1Q5C9Z4 860 aaKnown RBP17.61■□□□□ 0.41
SEC13-205ENST00000397101 RBM26Q5T8P6 1007 aaKnown RBP17.61■□□□□ 0.41
SEC13-205ENST00000397101 ANKRD13DQ6ZTN6 518 aa17.61■□□□□ 0.41
SEC13-205ENST00000397101 RASAL3Q86YV0 1011 aa17.61■□□□□ 0.41
SEC13-205ENST00000397101 CDCA5Q96FF9 252 aa17.61■□□□□ 0.41
SEC13-205ENST00000397101 ZC3H12CQ9C0D7 883 aaKnown RBP17.61■□□□□ 0.41
SEC13-205ENST00000397101 KCNQ5Q9NR82 932 aa17.61■□□□□ 0.41
SEC13-205ENST00000397101 PITPNM2Q9BZ72 1349 aa17.61■□□□□ 0.41
SEC13-205ENST00000397101 TAF1P21675 1872 aa17.61■□□□□ 0.41
SEC13-205ENST00000397101 TMPOP42166 694 aaKnown RBP17.6■□□□□ 0.41
SEC13-205ENST00000397101 FAM89AQ96GI7 184 aa17.6■□□□□ 0.41
SEC13-205ENST00000397101 CHL1O00533 1208 aa17.59■□□□□ 0.41
SEC13-205ENST00000397101 HSP90B1P14625 803 aaKnown RBP17.59■□□□□ 0.41
SEC13-205ENST00000397101 DOK7Q18PE1 504 aa17.59■□□□□ 0.41
SEC13-205ENST00000397101 RSBN1LQ6PCB5 846 aaPredicted RBP17.58■□□□□ 0.4
SEC13-205ENST00000397101 CHPF2Q9P2E5 772 aa17.58■□□□□ 0.4
SEC13-205ENST00000397101 DBF4Q9UBU7 674 aaPredicted RBP17.58■□□□□ 0.4
SEC13-205ENST00000397101 HPS5Q9UPZ3 1129 aa17.58■□□□□ 0.4
SEC13-205ENST00000397101 PAPPA2Q9BXP8 1791 aa17.58■□□□□ 0.4
SEC13-205ENST00000397101 IRS4O14654 1257 aaPredicted RBP17.57■□□□□ 0.4
SEC13-205ENST00000397101 SCARF1Q14162 830 aa17.57■□□□□ 0.4
SEC13-205ENST00000397101 MKI67P46013 3256 aaKnown RBP17.56■□□□□ 0.4
SEC13-205ENST00000397101 HDGFL1Q5TGJ6 251 aa17.56■□□□□ 0.4
SEC13-205ENST00000397101 ANGEL2Q5VTE6 544 aaKnown RBP17.56■□□□□ 0.4
SEC13-205ENST00000397101 GMLQ99445 158 aa17.56■□□□□ 0.4
SEC13-205ENST00000397101 GGA1Q9UJY5 639 aa17.56■□□□□ 0.4
SEC13-205ENST00000397101 SCN9AQ15858 1988 aa17.56■□□□□ 0.4
SEC13-205ENST00000397101 ASTN2O75129 1339 aaPredicted RBP17.55■□□□□ 0.4
SEC13-205ENST00000397101 ATP5J2-PTCD1G3V325 749 aa17.55■□□□□ 0.4
SEC13-205ENST00000397101 ZBTB38Q8NAP3 1195 aaPredicted RBP17.55■□□□□ 0.4
SEC13-205ENST00000397101 HYPKQ9NX55 129 aa17.55■□□□□ 0.4
SEC13-205ENST00000397101 COL4A1P02462 1669 aa17.55■□□□□ 0.4
SEC13-205ENST00000397101 G3V3G9 751 aa17.54■□□□□ 0.4
SEC13-205ENST00000397101 UFL1O94874 794 aa17.54■□□□□ 0.4
SEC13-205ENST00000397101 USP17L8P0C7I0 530 aa17.54■□□□□ 0.4
SEC13-205ENST00000397101 TM4SF4P48230 202 aa17.54■□□□□ 0.4
SEC13-205ENST00000397101 DCAF8Q5TAQ9 597 aa17.54■□□□□ 0.4
SEC13-205ENST00000397101 PODNQ7Z5L7 613 aa17.54■□□□□ 0.4
SEC13-205ENST00000397101 ZNF296Q8WUU4 475 aaPredicted RBP17.54■□□□□ 0.4
SEC13-205ENST00000397101 CFHR5Q9BXR6 569 aa17.54■□□□□ 0.4
SEC13-205ENST00000397101 MYOZ2Q9NPC6 264 aa17.54■□□□□ 0.4
SEC13-205ENST00000397101 ANKIB1Q9P2G1 1089 aa17.54■□□□□ 0.4
SEC13-205ENST00000397101 MMP14P50281 582 aa17.53■□□□□ 0.4
SEC13-205ENST00000397101 KRT24Q2M2I5 525 aa17.53■□□□□ 0.4
SEC13-205ENST00000397101 HDAC9Q9UKV0 1011 aa17.53■□□□□ 0.4
SEC13-205ENST00000397101 ZBED9Q6R2W3 1325 aa17.52■□□□□ 0.4
SEC13-205ENST00000397101 PSME4Q14997 1843 aa17.52■□□□□ 0.4
SEC13-205ENST00000397101 CCDC152Q4G0S7 254 aa17.52■□□□□ 0.4
SEC13-205ENST00000397101 FBXO46Q6PJ61 603 aaPredicted RBP17.52■□□□□ 0.4
SEC13-205ENST00000397101 GCC1Q96CN9 775 aa17.52■□□□□ 0.4
SEC13-205ENST00000397101 XDHP47989 1333 aa17.51■□□□□ 0.39
SEC13-205ENST00000397101 USP17L3A6NCW0 530 aa17.51■□□□□ 0.39
SEC13-205ENST00000397101 USP17L4A6NCW7 530 aa17.51■□□□□ 0.39
SEC13-205ENST00000397101 USP17L1Q7RTZ2 530 aa17.51■□□□□ 0.39
SEC13-205ENST00000397101 SEC31BQ9NQW1 1179 aa17.51■□□□□ 0.39
SEC13-205ENST00000397101 HTTP42858 3142 aa17.5■□□□□ 0.39
SEC13-205ENST00000397101 GPR25O00155 361 aa17.5■□□□□ 0.39
SEC13-205ENST00000397101 ATP2B4P23634 1241 aa17.5■□□□□ 0.39
SEC13-205ENST00000397101 CCDC27Q2M243 656 aa17.5■□□□□ 0.39
SEC13-205ENST00000397101 NCBP3Q53F19 620 aaKnown RBP17.5■□□□□ 0.39
SEC13-205ENST00000397101 RTL5Q5HYW3 569 aaPredicted RBP17.5■□□□□ 0.39
SEC13-205ENST00000397101 WWC1Q8IX03 1113 aa17.5■□□□□ 0.39
SEC13-205ENST00000397101 ZNF428Q96B54 188 aa17.5■□□□□ 0.39
SEC13-205ENST00000397101 TRIM35Q9UPQ4 493 aa17.5■□□□□ 0.39
SEC13-205ENST00000397101 PDE8AO60658 829 aa17.49■□□□□ 0.39
SEC13-205ENST00000397101 TBC1D8O95759 1140 aa17.49■□□□□ 0.39
SEC13-205ENST00000397101 PCCAP05165 728 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms