RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 CTNNA3Q9UI47 895 aa18■□□□□ 0.47
MCF2L-205ENST00000397017 KRT32Q14532 448 aa18■□□□□ 0.47
MCF2L-205ENST00000397017 TPTE2Q6XPS3 522 aa18■□□□□ 0.47
MCF2L-205ENST00000397017 NLRP10Q86W26 655 aa18■□□□□ 0.47
MCF2L-205ENST00000397017 IL27Q8NEV9 243 aa18■□□□□ 0.47
MCF2L-205ENST00000397017 SNX21Q969T3 373 aa18■□□□□ 0.47
MCF2L-205ENST00000397017 ATP2B2Q01814 1243 aa17.99■□□□□ 0.47
MCF2L-205ENST00000397017 COPRSQ9NQ92 184 aa17.99■□□□□ 0.47
MCF2L-205ENST00000397017 F8W031 263 aaPredicted RBP17.99■□□□□ 0.47
MCF2L-205ENST00000397017 CTSWP56202 376 aa17.99■□□□□ 0.47
MCF2L-205ENST00000397017 TRAPPC3LQ5T215 181 aa17.99■□□□□ 0.47
MCF2L-205ENST00000397017 MAGEB6Q8N7X4 407 aa17.99■□□□□ 0.47
MCF2L-205ENST00000397017 MARCH10Q8NA82 808 aaPredicted RBP17.99■□□□□ 0.47
MCF2L-205ENST00000397017 ANKRD1Q15327 319 aa17.99■□□□□ 0.47
MCF2L-205ENST00000397017 TTLL5Q6EMB2 1281 aa17.98■□□□□ 0.47
MCF2L-205ENST00000397017 Q6ZUG5 572 aa17.98■□□□□ 0.47
MCF2L-205ENST00000397017 PI4K2BQ8TCG2 481 aa17.98■□□□□ 0.47
MCF2L-205ENST00000397017 MICU3Q86XE3 530 aa17.98■□□□□ 0.47
MCF2L-205ENST00000397017 ZNF622Q969S3 477 aaKnown RBP eCLIP17.98■□□□□ 0.47
MCF2L-205ENST00000397017 RANBP6O60518 1105 aaKnown RBP17.98■□□□□ 0.47
MCF2L-205ENST00000397017 CYP7A1P22680 504 aa17.98■□□□□ 0.47
MCF2L-205ENST00000397017 RBM5P52756 815 aaKnown RBP eCLIP17.98■□□□□ 0.47
MCF2L-205ENST00000397017 ADCK5Q3MIX3 580 aa17.98■□□□□ 0.47
MCF2L-205ENST00000397017 ZNF589Q86UQ0 364 aaPredicted RBP17.98■□□□□ 0.47
MCF2L-205ENST00000397017 CREBRFQ8IUR6 639 aa17.98■□□□□ 0.47
MCF2L-205ENST00000397017 CSPP1Q1MSJ5 1256 aa17.97■□□□□ 0.47
MCF2L-205ENST00000397017 FAM173BQ6P4H8 233 aa17.97■□□□□ 0.47
MCF2L-205ENST00000397017 DZIP1Q86YF9 867 aaKnown RBP17.97■□□□□ 0.47
MCF2L-205ENST00000397017 AMOTL1Q8IY63 956 aa17.97■□□□□ 0.47
MCF2L-205ENST00000397017 RASSF8Q8NHQ8 419 aa17.97■□□□□ 0.47
MCF2L-205ENST00000397017 ATP10DQ9P241 1426 aa17.97■□□□□ 0.47
MCF2L-205ENST00000397017 RNF113AO15541 343 aaKnown RBP17.97■□□□□ 0.47
MCF2L-205ENST00000397017 PCCAP05165 728 aaPredicted RBP17.96■□□□□ 0.47
MCF2L-205ENST00000397017 SUSD4Q5VX71 490 aa17.96■□□□□ 0.47
MCF2L-205ENST00000397017 STAP2Q9UGK3 403 aa17.96■□□□□ 0.47
MCF2L-205ENST00000397017 PDCP20941 246 aa17.96■□□□□ 0.47
MCF2L-205ENST00000397017 SF3B2Q13435 895 aaKnown RBP17.96■□□□□ 0.47
MCF2L-205ENST00000397017 KBTBD3Q8NAB2 608 aa17.96■□□□□ 0.47
MCF2L-205ENST00000397017 SLC27A2O14975 620 aa17.96■□□□□ 0.47
MCF2L-205ENST00000397017 APOBRQ0VD83 1088 aa17.96■□□□□ 0.47
MCF2L-205ENST00000397017 MSL1Q68DK7 614 aa17.96■□□□□ 0.47
MCF2L-205ENST00000397017 ADGRB2O60241 1585 aa17.96■□□□□ 0.46
MCF2L-205ENST00000397017 RAD50Q92878 1312 aa17.95■□□□□ 0.46
MCF2L-205ENST00000397017 SYCE3A1L190 88 aa17.95■□□□□ 0.46
MCF2L-205ENST00000397017 CYP19A1P11511 503 aaPredicted RBP17.95■□□□□ 0.46
MCF2L-205ENST00000397017 BCAMP50895 628 aa17.95■□□□□ 0.46
MCF2L-205ENST00000397017 SART3Q15020 963 aaKnown RBP17.95■□□□□ 0.46
MCF2L-205ENST00000397017 FAM196AQ6ZSG2 479 aa17.95■□□□□ 0.46
MCF2L-205ENST00000397017 ZSCAN31Q96LW9 406 aaPredicted RBP17.95■□□□□ 0.46
MCF2L-205ENST00000397017 OSBPL3Q9H4L5 887 aa17.95■□□□□ 0.46
MCF2L-205ENST00000397017 GOLGA8BA8MQT2 603 aa17.95■□□□□ 0.46
MCF2L-205ENST00000397017 PHKA1P46020 1223 aa17.95■□□□□ 0.46
MCF2L-205ENST00000397017 GYG1P46976 350 aa17.95■□□□□ 0.46
MCF2L-205ENST00000397017 NCAPD2Q15021 1401 aa17.95■□□□□ 0.46
MCF2L-205ENST00000397017 CCDC69A6NI79 296 aa17.95■□□□□ 0.46
MCF2L-205ENST00000397017 RIMBP2O15034 1052 aa17.95■□□□□ 0.46
MCF2L-205ENST00000397017 ZKSCAN3Q9BRR0 538 aa17.95■□□□□ 0.46
MCF2L-205ENST00000397017 UBAC1Q9BSL1 405 aa17.95■□□□□ 0.46
MCF2L-205ENST00000397017 KDM6AO15550 1401 aaPredicted RBP17.94■□□□□ 0.46
MCF2L-205ENST00000397017 H7C1W4 665 aa17.94■□□□□ 0.46
MCF2L-205ENST00000397017 ATP5JP18859 108 aa17.94■□□□□ 0.46
MCF2L-205ENST00000397017 IL6STP40189 918 aaPredicted RBP17.94■□□□□ 0.46
MCF2L-205ENST00000397017 KAZALD1Q96I82 304 aa17.94■□□□□ 0.46
MCF2L-205ENST00000397017 IL25Q9H293 177 aa17.94■□□□□ 0.46
MCF2L-205ENST00000397017 PALLDQ8WX93 1383 aa17.94■□□□□ 0.46
MCF2L-205ENST00000397017 STX6O43752 255 aa17.94■□□□□ 0.46
MCF2L-205ENST00000397017 CAMK4Q16566 473 aa17.94■□□□□ 0.46
MCF2L-205ENST00000397017 SEPT12Q8IYM1 358 aa17.94■□□□□ 0.46
MCF2L-205ENST00000397017 ERBB4Q15303 1308 aa17.94■□□□□ 0.46
MCF2L-205ENST00000397017 IFIT3O14879 490 aaKnown RBP17.93■□□□□ 0.46
MCF2L-205ENST00000397017 HSPA1LP34931 641 aa17.93■□□□□ 0.46
MCF2L-205ENST00000397017 NCOA5Q9HCD5 579 aaKnown RBP17.93■□□□□ 0.46
MCF2L-205ENST00000397017 SLC4A4Q9Y6R1 1079 aa17.93■□□□□ 0.46
MCF2L-205ENST00000397017 ANAPC15P60006 121 aa17.93■□□□□ 0.46
MCF2L-205ENST00000397017 HSPA4P34932 840 aa17.93■□□□□ 0.46
MCF2L-205ENST00000397017 USP5P45974 858 aa17.93■□□□□ 0.46
MCF2L-205ENST00000397017 VPS53Q5VIR6 699 aa17.93■□□□□ 0.46
MCF2L-205ENST00000397017 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.93■□□□□ 0.46
MCF2L-205ENST00000397017 CNBD1Q8NA66 436 aa17.92■□□□□ 0.46
MCF2L-205ENST00000397017 NAP1L5Q96NT1 182 aaPredicted RBP17.92■□□□□ 0.46
MCF2L-205ENST00000397017 ARMT1Q9H993 441 aa17.92■□□□□ 0.46
MCF2L-205ENST00000397017 MBD4O95243 580 aa17.92■□□□□ 0.46
MCF2L-205ENST00000397017 TTLL11Q8NHH1 800 aa17.92■□□□□ 0.46
MCF2L-205ENST00000397017 MSNP26038 577 aaKnown RBP17.92■□□□□ 0.46
MCF2L-205ENST00000397017 ME1P48163 572 aa17.92■□□□□ 0.46
MCF2L-205ENST00000397017 ERFEQ4G0M1 354 aa17.92■□□□□ 0.46
MCF2L-205ENST00000397017 KLF18A0A0U1RQI7 1052 aa17.92■□□□□ 0.46
MCF2L-205ENST00000397017 AFF2P51816 1311 aa17.91■□□□□ 0.46
MCF2L-205ENST00000397017 GPAA1O43292 621 aa17.91■□□□□ 0.46
MCF2L-205ENST00000397017 POLR3DP05423 398 aaPredicted RBP17.91■□□□□ 0.46
MCF2L-205ENST00000397017 UQCRFS1P1P0C7P4 283 aa17.91■□□□□ 0.46
MCF2L-205ENST00000397017 PARP10Q53GL7 1025 aa17.91■□□□□ 0.46
MCF2L-205ENST00000397017 CNPY2Q9Y2B0 182 aa17.91■□□□□ 0.46
MCF2L-205ENST00000397017 PRDM1O75626 825 aa17.91■□□□□ 0.46
MCF2L-205ENST00000397017 APBA3O96018 575 aa17.91■□□□□ 0.46
MCF2L-205ENST00000397017 NASPP49321 788 aaPredicted RBP17.91■□□□□ 0.46
MCF2L-205ENST00000397017 KRT85P78386 507 aa17.91■□□□□ 0.46
MCF2L-205ENST00000397017 PUM3Q15397 648 aaKnown RBP17.91■□□□□ 0.46
MCF2L-205ENST00000397017 TTF1Q15361 905 aaPredicted RBP17.91■□□□□ 0.46
MCF2L-205ENST00000397017 CCDC102BQ68D86 513 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms