RNA–Protein interactions for RNA: ENST00000396966.6

SCNN1A-205, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3 BASIC

Gene SCNN1A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-205ENST00000396966 GORABQ5T7V8 394 aa20.68■□□□□ 0.9
SCNN1A-205ENST00000396966 NMIQ13287 307 aaPredicted RBP20.67■□□□□ 0.9
SCNN1A-205ENST00000396966 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.67■□□□□ 0.9
SCNN1A-205ENST00000396966 COL24A1Q17RW2 1714 aa20.67■□□□□ 0.9
SCNN1A-205ENST00000396966 IFIT1P09914 478 aaKnown RBP20.67■□□□□ 0.9
SCNN1A-205ENST00000396966 USPL1Q5W0Q7 1092 aa20.67■□□□□ 0.9
SCNN1A-205ENST00000396966 ZNF772Q68DY9 489 aaPredicted RBP20.67■□□□□ 0.9
SCNN1A-205ENST00000396966 GBP4Q96PP9 640 aa20.67■□□□□ 0.9
SCNN1A-205ENST00000396966 RTL9Q8NET4 1388 aa20.67■□□□□ 0.9
SCNN1A-205ENST00000396966 GOLGA6L3A6NEY3 463 aa20.66■□□□□ 0.9
SCNN1A-205ENST00000396966 EDC3Q96F86 508 aaKnown RBP20.66■□□□□ 0.9
SCNN1A-205ENST00000396966 XAGE2Q96GT9 111 aa20.66■□□□□ 0.9
SCNN1A-205ENST00000396966 ATP2B3Q16720 1220 aa20.66■□□□□ 0.9
SCNN1A-205ENST00000396966 IL17RAQ96F46 866 aa20.66■□□□□ 0.9
SCNN1A-205ENST00000396966 MROH5Q6ZUA9 1318 aa20.65■□□□□ 0.9
SCNN1A-205ENST00000396966 TTC39AQ5SRH9 613 aa20.65■□□□□ 0.9
SCNN1A-205ENST00000396966 TICAM2Q86XR7 235 aa20.65■□□□□ 0.9
SCNN1A-205ENST00000396966 FAM227BQ96M60 508 aa20.65■□□□□ 0.9
SCNN1A-205ENST00000396966 PAG1Q9NWQ8 432 aa20.65■□□□□ 0.9
SCNN1A-205ENST00000396966 ARAP2Q8WZ64 1704 aa20.65■□□□□ 0.9
SCNN1A-205ENST00000396966 TBC1D9BQ66K14 1250 aa20.65■□□□□ 0.9
SCNN1A-205ENST00000396966 MPHOSPH8Q99549 860 aa20.65■□□□□ 0.9
SCNN1A-205ENST00000396966 NYXQ9GZU5 481 aa20.65■□□□□ 0.9
SCNN1A-205ENST00000396966 BCL2L12Q9HB09 334 aa20.65■□□□□ 0.9
SCNN1A-205ENST00000396966 SNRKQ9NRH2 765 aa20.65■□□□□ 0.9
SCNN1A-205ENST00000396966 PALD1Q9ULE6 856 aa20.65■□□□□ 0.9
SCNN1A-205ENST00000396966 SSFA2P28290 1259 aa20.64■□□□□ 0.89
SCNN1A-205ENST00000396966 BICDL1Q6ZP65 573 aa20.64■□□□□ 0.89
SCNN1A-205ENST00000396966 KBTBD3Q8NAB2 608 aa20.64■□□□□ 0.89
SCNN1A-205ENST00000396966 SETDB2Q96T68 719 aa20.64■□□□□ 0.89
SCNN1A-205ENST00000396966 ABCC12Q96J65 1359 aa20.64■□□□□ 0.89
SCNN1A-205ENST00000396966 PDE8BO95263 885 aa20.64■□□□□ 0.89
SCNN1A-205ENST00000396966 GTF2E1P29083 439 aaPredicted RBP20.64■□□□□ 0.89
SCNN1A-205ENST00000396966 RBM6P78332 1123 aaKnown RBP20.64■□□□□ 0.89
SCNN1A-205ENST00000396966 SMIM5Q71RC9 77 aa20.64■□□□□ 0.89
SCNN1A-205ENST00000396966 DDX46Q7L014 1031 aaKnown RBP20.64■□□□□ 0.89
SCNN1A-205ENST00000396966 ARHGEF1Q92888 912 aaKnown RBP20.64■□□□□ 0.89
SCNN1A-205ENST00000396966 SRP68Q9UHB9 627 aaKnown RBP20.64■□□□□ 0.89
SCNN1A-205ENST00000396966 NDUFB9Q9Y6M9 179 aa20.64■□□□□ 0.89
SCNN1A-205ENST00000396966 UBR3Q6ZT12 1888 aa20.63■□□□□ 0.89
SCNN1A-205ENST00000396966 IGHMBP2P38935 993 aaKnown RBP20.63■□□□□ 0.89
SCNN1A-205ENST00000396966 TRAPPC3LQ5T215 181 aa20.63■□□□□ 0.89
SCNN1A-205ENST00000396966 VGLL2Q8N8G2 317 aa20.63■□□□□ 0.89
SCNN1A-205ENST00000396966 CCDC171Q6TFL3 1326 aa20.63■□□□□ 0.89
SCNN1A-205ENST00000396966 MYH7P12883 1935 aa20.63■□□□□ 0.89
SCNN1A-205ENST00000396966 A0A0D9SFI3 127 aa20.62■□□□□ 0.89
SCNN1A-205ENST00000396966 FSD2A1L4K1 749 aa20.62■□□□□ 0.89
SCNN1A-205ENST00000396966 GOLIM4O00461 696 aa20.62■□□□□ 0.89
SCNN1A-205ENST00000396966 ADORA1P30542 326 aa20.62■□□□□ 0.89
SCNN1A-205ENST00000396966 NEK4P51957 841 aa20.62■□□□□ 0.89
SCNN1A-205ENST00000396966 ERFEQ4G0M1 354 aa20.62■□□□□ 0.89
SCNN1A-205ENST00000396966 XRCC6P12956 609 aaKnown RBP eCLIP20.62■□□□□ 0.89
SCNN1A-205ENST00000396966 RFC4P35249 363 aa20.62■□□□□ 0.89
SCNN1A-205ENST00000396966 MED23Q9ULK4 1368 aa20.61■□□□□ 0.89
SCNN1A-205ENST00000396966 SLC27A3Q5K4L6 730 aa20.61■□□□□ 0.89
SCNN1A-205ENST00000396966 SEC31BQ9NQW1 1179 aa20.61■□□□□ 0.89
SCNN1A-205ENST00000396966 MCM2P49736 904 aa20.61■□□□□ 0.89
SCNN1A-205ENST00000396966 PTH1RQ03431 593 aa20.61■□□□□ 0.89
SCNN1A-205ENST00000396966 TRIM37O94972 964 aa20.6■□□□□ 0.89
SCNN1A-205ENST00000396966 HMGB2P26583 209 aaKnown RBP20.6■□□□□ 0.89
SCNN1A-205ENST00000396966 PUM3Q15397 648 aaKnown RBP20.6■□□□□ 0.89
SCNN1A-205ENST00000396966 CDC5LQ99459 802 aaKnown RBP20.6■□□□□ 0.89
SCNN1A-205ENST00000396966 LRRC4BQ9NT99 713 aa20.6■□□□□ 0.89
SCNN1A-205ENST00000396966 AKAP11Q9UKA4 1901 aa20.6■□□□□ 0.89
SCNN1A-205ENST00000396966 PHF14O94880 888 aa20.6■□□□□ 0.89
SCNN1A-205ENST00000396966 ADRA2BP18089 450 aa20.6■□□□□ 0.89
SCNN1A-205ENST00000396966 KCNJ4P48050 445 aa20.6■□□□□ 0.89
SCNN1A-205ENST00000396966 LRRFIP1Q32MZ4 808 aaKnown RBP20.6■□□□□ 0.89
SCNN1A-205ENST00000396966 SLC10A5Q5PT55 438 aa20.6■□□□□ 0.89
SCNN1A-205ENST00000396966 SNX14Q9Y5W7 946 aa20.6■□□□□ 0.89
SCNN1A-205ENST00000396966 SF3B3Q15393 1217 aaKnown RBP20.59■□□□□ 0.89
SCNN1A-205ENST00000396966 NBPF5PQ86XG9 351 aaPredicted RBP20.59■□□□□ 0.89
SCNN1A-205ENST00000396966 LPIN2Q92539 896 aa20.59■□□□□ 0.89
SCNN1A-205ENST00000396966 FKBP4Q02790 459 aaKnown RBP eCLIP20.59■□□□□ 0.89
SCNN1A-205ENST00000396966 TPTE2Q6XPS3 522 aa20.59■□□□□ 0.89
SCNN1A-205ENST00000396966 MAP4K1Q92918 833 aa20.59■□□□□ 0.89
SCNN1A-205ENST00000396966 A0A1B0GUL6 1792 aa20.58■□□□□ 0.89
SCNN1A-205ENST00000396966 MCMDC2Q4G0Z9 681 aa20.58■□□□□ 0.89
SCNN1A-205ENST00000396966 TAF1P21675 1872 aa20.58■□□□□ 0.89
SCNN1A-205ENST00000396966 AMIGO3Q86WK7 504 aa20.58■□□□□ 0.88
SCNN1A-205ENST00000396966 ZNF512BQ96KM6 892 aaPredicted RBP20.58■□□□□ 0.88
SCNN1A-205ENST00000396966 RBM8AQ9Y5S9 174 aaKnown RBP20.58■□□□□ 0.88
SCNN1A-205ENST00000396966 SLC5A1P13866 664 aa20.57■□□□□ 0.88
SCNN1A-205ENST00000396966 PRPF40BQ6NWY9 871 aaKnown RBP20.57■□□□□ 0.88
SCNN1A-205ENST00000396966 HELLSQ9NRZ9 838 aa20.57■□□□□ 0.88
SCNN1A-205ENST00000396966 ZKSCAN1P17029 563 aaPredicted RBP20.56■□□□□ 0.88
SCNN1A-205ENST00000396966 NECTIN1Q15223 517 aa20.56■□□□□ 0.88
SCNN1A-205ENST00000396966 PANK2Q9BZ23 570 aa20.56■□□□□ 0.88
SCNN1A-205ENST00000396966 FGFR2P21802 821 aa20.56■□□□□ 0.88
SCNN1A-205ENST00000396966 RNF20Q5VTR2 975 aa20.56■□□□□ 0.88
SCNN1A-205ENST00000396966 ZNF589Q86UQ0 364 aaPredicted RBP20.56■□□□□ 0.88
SCNN1A-205ENST00000396966 ANKRD18AQ8IVF6 992 aa20.56■□□□□ 0.88
SCNN1A-205ENST00000396966 HELBQ8NG08 1087 aaPredicted RBP20.56■□□□□ 0.88
SCNN1A-205ENST00000396966 KCNB2Q92953 911 aa20.56■□□□□ 0.88
SCNN1A-205ENST00000396966 NLRP3Q96P20 1036 aa20.56■□□□□ 0.88
SCNN1A-205ENST00000396966 UQCRFS1P1P0C7P4 283 aa20.55■□□□□ 0.88
SCNN1A-205ENST00000396966 RASEFQ8IZ41 740 aa20.55■□□□□ 0.88
SCNN1A-205ENST00000396966 ZGPATQ8N5A5 531 aaKnown RBP20.55■□□□□ 0.88
SCNN1A-205ENST00000396966 RNF113AO15541 343 aaKnown RBP20.55■□□□□ 0.88
SCNN1A-205ENST00000396966 BAG4O95429 457 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms