RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 CELF1Q92879 486 aaKnown RBP18.22■□□□□ 0.51
TM9SF1-202ENST00000396854 PUS3Q9BZE2 481 aaKnown RBP18.22■□□□□ 0.51
TM9SF1-202ENST00000396854 RIPOR2Q9Y4F9 1068 aa18.22■□□□□ 0.51
TM9SF1-202ENST00000396854 APBB1O00213 710 aa18.22■□□□□ 0.51
TM9SF1-202ENST00000396854 GRAPQ13588 217 aa18.22■□□□□ 0.51
TM9SF1-202ENST00000396854 GRAPLQ8TC17 118 aaPredicted RBP18.22■□□□□ 0.51
TM9SF1-202ENST00000396854 RBM17Q96I25 401 aaKnown RBP18.22■□□□□ 0.51
TM9SF1-202ENST00000396854 CRAMP1Q96RY5 1269 aa18.22■□□□□ 0.51
TM9SF1-202ENST00000396854 MPHOSPH8Q99549 860 aa18.22■□□□□ 0.51
TM9SF1-202ENST00000396854 CNNM1Q9NRU3 951 aa18.21■□□□□ 0.51
TM9SF1-202ENST00000396854 ARAP2Q8WZ64 1704 aa18.21■□□□□ 0.51
TM9SF1-202ENST00000396854 SOCS7O14512 581 aa18.21■□□□□ 0.51
TM9SF1-202ENST00000396854 NPR1P16066 1061 aa18.21■□□□□ 0.51
TM9SF1-202ENST00000396854 RPS8P62241 208 aaKnown RBP18.21■□□□□ 0.51
TM9SF1-202ENST00000396854 LNPKQ9C0E8 428 aa18.21■□□□□ 0.51
TM9SF1-202ENST00000396854 BSDC1Q9NW68 430 aaPredicted RBP18.21■□□□□ 0.51
TM9SF1-202ENST00000396854 BRCA1P38398 1863 aaKnown RBP18.2■□□□□ 0.5
TM9SF1-202ENST00000396854 SMARCA5O60264 1052 aaPredicted RBP18.2■□□□□ 0.5
TM9SF1-202ENST00000396854 MROH5Q6ZUA9 1318 aa18.2■□□□□ 0.5
TM9SF1-202ENST00000396854 MASTLQ96GX5 879 aa18.19■□□□□ 0.5
TM9SF1-202ENST00000396854 H0YIN7 160 aa18.19■□□□□ 0.5
TM9SF1-202ENST00000396854 SEC24BO95487 1268 aa18.19■□□□□ 0.5
TM9SF1-202ENST00000396854 C2CD5Q86YS7 1000 aa18.19■□□□□ 0.5
TM9SF1-202ENST00000396854 IL1RAPL2Q9NP60 686 aa18.19■□□□□ 0.5
TM9SF1-202ENST00000396854 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.19■□□□□ 0.5
TM9SF1-202ENST00000396854 TFCP2Q12800 502 aa18.18■□□□□ 0.5
TM9SF1-202ENST00000396854 STYK1Q6J9G0 422 aa18.18■□□□□ 0.5
TM9SF1-202ENST00000396854 VGLL2Q8N8G2 317 aa18.18■□□□□ 0.5
TM9SF1-202ENST00000396854 SPON1Q9HCB6 807 aa18.18■□□□□ 0.5
TM9SF1-202ENST00000396854 GPR108Q9NPR9 543 aa18.18■□□□□ 0.5
TM9SF1-202ENST00000396854 ZNF609O15014 1411 aa18.18■□□□□ 0.5
TM9SF1-202ENST00000396854 CLASRPQ8N2M8 674 aaKnown RBP18.18■□□□□ 0.5
TM9SF1-202ENST00000396854 BBOX1O75936 387 aa18.17■□□□□ 0.5
TM9SF1-202ENST00000396854 ALDH1B1P30837 517 aa18.17■□□□□ 0.5
TM9SF1-202ENST00000396854 CEP126Q9P2H0 1117 aa18.17■□□□□ 0.5
TM9SF1-202ENST00000396854 SLX4Q8IY92 1834 aa18.17■□□□□ 0.5
TM9SF1-202ENST00000396854 LTBP1Q14766 1721 aa18.17■□□□□ 0.5
TM9SF1-202ENST00000396854 METTL24Q5JXM2 366 aa18.16■□□□□ 0.5
TM9SF1-202ENST00000396854 TMC4Q7Z404 712 aa18.16■□□□□ 0.5
TM9SF1-202ENST00000396854 SALL3Q9BXA9 1300 aa18.16■□□□□ 0.5
TM9SF1-202ENST00000396854 CHRNDQ07001 517 aa18.16■□□□□ 0.5
TM9SF1-202ENST00000396854 TNNI3KQ59H18 835 aa18.16■□□□□ 0.5
TM9SF1-202ENST00000396854 MINPP1Q9UNW1 487 aa18.16■□□□□ 0.5
TM9SF1-202ENST00000396854 FPGT-TNNI3KV9GXZ4 949 aa18.16■□□□□ 0.5
TM9SF1-202ENST00000396854 PDE8BO95263 885 aa18.15■□□□□ 0.5
TM9SF1-202ENST00000396854 CHRNA5P30532 468 aa18.15■□□□□ 0.5
TM9SF1-202ENST00000396854 TGFB2P61812 414 aa18.15■□□□□ 0.5
TM9SF1-202ENST00000396854 EAF2Q96CJ1 260 aaPredicted RBP18.15■□□□□ 0.5
TM9SF1-202ENST00000396854 BECN1Q14457 450 aa18.14■□□□□ 0.5
TM9SF1-202ENST00000396854 GSE1Q14687 1217 aa18.14■□□□□ 0.5
TM9SF1-202ENST00000396854 C16orf71Q8IYS4 520 aaPredicted RBP18.14■□□□□ 0.5
TM9SF1-202ENST00000396854 AKAP2Q9Y2D5 859 aa18.14■□□□□ 0.5
TM9SF1-202ENST00000396854 CD2APQ9Y5K6 639 aa18.14■□□□□ 0.5
TM9SF1-202ENST00000396854 CNKSR1Q969H4 720 aa18.14■□□□□ 0.49
TM9SF1-202ENST00000396854 PPEF1O14829 653 aaPredicted RBP18.13■□□□□ 0.49
TM9SF1-202ENST00000396854 AACSQ86V21 672 aa18.13■□□□□ 0.49
TM9SF1-202ENST00000396854 ZNF622Q969S3 477 aaKnown RBP eCLIP18.13■□□□□ 0.49
TM9SF1-202ENST00000396854 OTUD7AQ8TE49 926 aaPredicted RBP18.13■□□□□ 0.49
TM9SF1-202ENST00000396854 TBC1D32Q96NH3 1257 aa18.13■□□□□ 0.49
TM9SF1-202ENST00000396854 ANKRD2Q9GZV1 360 aa18.13■□□□□ 0.49
TM9SF1-202ENST00000396854 UPF2Q9HAU5 1272 aaKnown RBP18.13■□□□□ 0.49
TM9SF1-202ENST00000396854 FGFR2P21802 821 aa18.12■□□□□ 0.49
TM9SF1-202ENST00000396854 KCNA3P22001 575 aa18.12■□□□□ 0.49
TM9SF1-202ENST00000396854 PUM3Q15397 648 aaKnown RBP18.12■□□□□ 0.49
TM9SF1-202ENST00000396854 PLEKHM2Q8IWE5 1019 aa18.12■□□□□ 0.49
TM9SF1-202ENST00000396854 SP8Q8IXZ3 490 aa18.12■□□□□ 0.49
TM9SF1-202ENST00000396854 A0A1B0GUL7 405 aa18.11■□□□□ 0.49
TM9SF1-202ENST00000396854 IFIT2P09913 472 aaKnown RBP18.11■□□□□ 0.49
TM9SF1-202ENST00000396854 DPEP1P16444 411 aa18.11■□□□□ 0.49
TM9SF1-202ENST00000396854 HELBQ8NG08 1087 aaPredicted RBP18.11■□□□□ 0.49
TM9SF1-202ENST00000396854 ATP6V0A2Q9Y487 856 aa18.11■□□□□ 0.49
TM9SF1-202ENST00000396854 TAF5LO75529 589 aa18.11■□□□□ 0.49
TM9SF1-202ENST00000396854 MX1P20591 662 aa18.11■□□□□ 0.49
TM9SF1-202ENST00000396854 ATP2B3Q16720 1220 aa18.11■□□□□ 0.49
TM9SF1-202ENST00000396854 OSBPL3Q9H4L5 887 aa18.11■□□□□ 0.49
TM9SF1-202ENST00000396854 STAP2Q9UGK3 403 aa18.11■□□□□ 0.49
TM9SF1-202ENST00000396854 PRPF40BQ6NWY9 871 aaKnown RBP18.1■□□□□ 0.49
TM9SF1-202ENST00000396854 LPIN2Q92539 896 aa18.1■□□□□ 0.49
TM9SF1-202ENST00000396854 CCDC8Q9H0W5 538 aaPredicted RBP18.1■□□□□ 0.49
TM9SF1-202ENST00000396854 DBNLQ9UJU6 430 aaKnown RBP18.1■□□□□ 0.49
TM9SF1-202ENST00000396854 XDHP47989 1333 aa18.1■□□□□ 0.49
TM9SF1-202ENST00000396854 A0A0G2JLW4 131 aa18.1■□□□□ 0.49
TM9SF1-202ENST00000396854 PDE1AP54750 535 aa18.1■□□□□ 0.49
TM9SF1-202ENST00000396854 TIMM10P62072 90 aa18.1■□□□□ 0.49
TM9SF1-202ENST00000396854 UBE4AQ14139 1066 aa18.1■□□□□ 0.49
TM9SF1-202ENST00000396854 TLR7Q9NYK1 1049 aaKnown RBP18.1■□□□□ 0.49
TM9SF1-202ENST00000396854 AOX1Q06278 1338 aa18.09■□□□□ 0.49
TM9SF1-202ENST00000396854 TTC41PQ6P2S7 1318 aa18.09■□□□□ 0.49
TM9SF1-202ENST00000396854 DUOX1Q9NRD9 1551 aa18.09■□□□□ 0.49
TM9SF1-202ENST00000396854 FRAT2O75474 233 aaPredicted RBP18.09■□□□□ 0.49
TM9SF1-202ENST00000396854 SLC51AQ86UW1 340 aa18.09■□□□□ 0.49
TM9SF1-202ENST00000396854 PODXL2Q9NZ53 605 aa18.09■□□□□ 0.49
TM9SF1-202ENST00000396854 ARFGEF1Q9Y6D6 1849 aa18.09■□□□□ 0.49
TM9SF1-202ENST00000396854 TTLL6Q8N841 843 aa18.08■□□□□ 0.49
TM9SF1-202ENST00000396854 DBNDD2Q9BQY9 259 aa18.08■□□□□ 0.49
TM9SF1-202ENST00000396854 SLC5A1P13866 664 aa18.08■□□□□ 0.48
TM9SF1-202ENST00000396854 NEUROD6Q96NK8 337 aa18.08■□□□□ 0.48
TM9SF1-202ENST00000396854 LEMD3Q9Y2U8 911 aa18.08■□□□□ 0.48
TM9SF1-202ENST00000396854 SNED1Q8TER0 1413 aa18.08■□□□□ 0.48
TM9SF1-202ENST00000396854 GPSM2P81274 684 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms