RNA–Protein interactions for RNA: ENST00000396065.2

GCNT3-201, Transcript of glucosaminyl (N-acetyl) transferase 3, mucin type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCNT3, Length 4,933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT3-201ENST00000396065 LRRC43Q8N309 656 aa9.68□□□□□ -0.86
GCNT3-201ENST00000396065 NAPGQ99747 312 aaPredicted RBP9.68□□□□□ -0.86
GCNT3-201ENST00000396065 TNNC1P63316 161 aa9.68□□□□□ -0.86
GCNT3-201ENST00000396065 SATB1Q01826 763 aa9.68□□□□□ -0.86
GCNT3-201ENST00000396065 FLIIQ13045 1269 aa9.68□□□□□ -0.86
GCNT3-201ENST00000396065 NPHP3Q7Z494 1330 aa9.68□□□□□ -0.86
GCNT3-201ENST00000396065 PRC1O43663 620 aa9.67□□□□□ -0.86
GCNT3-201ENST00000396065 KANK3Q6NY19 840 aa9.67□□□□□ -0.86
GCNT3-201ENST00000396065 AACSQ86V21 672 aa9.67□□□□□ -0.86
GCNT3-201ENST00000396065 ARHGAP24Q8N264 748 aa9.67□□□□□ -0.86
GCNT3-201ENST00000396065 MRPS27Q92552 414 aaKnown RBP9.67□□□□□ -0.86
GCNT3-201ENST00000396065 CAPS2Q9BXY5 557 aa9.67□□□□□ -0.86
GCNT3-201ENST00000396065 CTDP1Q9Y5B0 961 aaPredicted RBP9.67□□□□□ -0.86
GCNT3-201ENST00000396065 ZNF428Q96B54 188 aa9.67□□□□□ -0.86
GCNT3-201ENST00000396065 PPANQ9NQ55 473 aaKnown RBP9.67□□□□□ -0.86
GCNT3-201ENST00000396065 ZNF75DP51815 510 aa9.67□□□□□ -0.86
GCNT3-201ENST00000396065 ZNF131P52739 623 aa9.67□□□□□ -0.86
GCNT3-201ENST00000396065 CCDC65Q8IXS2 484 aa9.67□□□□□ -0.86
GCNT3-201ENST00000396065 TTC5Q8N0Z6 440 aa9.67□□□□□ -0.86
GCNT3-201ENST00000396065 ELP1O95163 1332 aa9.67□□□□□ -0.86
GCNT3-201ENST00000396065 CTNNA2P26232 953 aa9.67□□□□□ -0.86
GCNT3-201ENST00000396065 RAD51AP2Q09MP3 1159 aa9.67□□□□□ -0.86
GCNT3-201ENST00000396065 SF3B2Q13435 895 aaKnown RBP9.67□□□□□ -0.86
GCNT3-201ENST00000396065 TMED1Q13445 227 aa9.67□□□□□ -0.86
GCNT3-201ENST00000396065 GKAP1Q5VSY0 366 aaPredicted RBP9.67□□□□□ -0.86
GCNT3-201ENST00000396065 DUSP27Q5VZP5 1158 aa9.67□□□□□ -0.86
GCNT3-201ENST00000396065 SND1Q7KZF4 910 aaKnown RBP eCLIP9.67□□□□□ -0.861e-6■■■■□ 24.3
GCNT3-201ENST00000396065 CXorf56Q9H5V9 222 aa9.67□□□□□ -0.86
GCNT3-201ENST00000396065 MED4Q9NPJ6 270 aa9.67□□□□□ -0.86
GCNT3-201ENST00000396065 FAM71BQ8TC56 605 aa9.66□□□□□ -0.86
GCNT3-201ENST00000396065 CNKSR2Q8WXI2 1034 aa9.66□□□□□ -0.86
GCNT3-201ENST00000396065 GLRX3O76003 335 aaKnown RBP9.66□□□□□ -0.86
GCNT3-201ENST00000396065 STMN1P16949 149 aa9.66□□□□□ -0.86
GCNT3-201ENST00000396065 PRKAR2BP31323 418 aa9.66□□□□□ -0.86
GCNT3-201ENST00000396065 SF3A3Q12874 501 aaKnown RBP eCLIP9.66□□□□□ -0.86
GCNT3-201ENST00000396065 VPS52Q8N1B4 723 aa9.66□□□□□ -0.86
GCNT3-201ENST00000396065 ZC4H2Q9NQZ6 224 aa9.66□□□□□ -0.86
GCNT3-201ENST00000396065 MTRF1LQ9UGC7 380 aaKnown RBP9.66□□□□□ -0.86
GCNT3-201ENST00000396065 EID1Q9Y6B2 187 aa9.66□□□□□ -0.86
GCNT3-201ENST00000396065 IRX1P78414 480 aaPredicted RBP9.66□□□□□ -0.86
GCNT3-201ENST00000396065 EXOC4Q96A65 974 aa9.66□□□□□ -0.86
GCNT3-201ENST00000396065 NUF2Q9BZD4 464 aa9.66□□□□□ -0.86
GCNT3-201ENST00000396065 PHAXQ9H814 394 aaKnown RBP9.66□□□□□ -0.86
GCNT3-201ENST00000396065 XAB2Q9HCS7 855 aaKnown RBP9.66□□□□□ -0.86
GCNT3-201ENST00000396065 ATP8B1O43520 1251 aa9.66□□□□□ -0.86
GCNT3-201ENST00000396065 PPARDQ03181 441 aa9.66□□□□□ -0.86
GCNT3-201ENST00000396065 C8orf74Q6P047 294 aa9.66□□□□□ -0.86
GCNT3-201ENST00000396065 ZGPATQ8N5A5 531 aaKnown RBP9.66□□□□□ -0.86
GCNT3-201ENST00000396065 CCDC42Q96M95 316 aa9.66□□□□□ -0.86
GCNT3-201ENST00000396065 CCDC88BA6NC98 1476 aa9.65□□□□□ -0.86
GCNT3-201ENST00000396065 SEC24BO95487 1268 aa9.65□□□□□ -0.86
GCNT3-201ENST00000396065 POLR3DP05423 398 aaPredicted RBP9.65□□□□□ -0.86
GCNT3-201ENST00000396065 KRT13P13646 458 aa9.65□□□□□ -0.86
GCNT3-201ENST00000396065 VPS41P49754 854 aa9.65□□□□□ -0.86
GCNT3-201ENST00000396065 HSP90AA5PQ58FG0 334 aa9.65□□□□□ -0.86
GCNT3-201ENST00000396065 GGNBP2Q9H3C7 697 aa9.65□□□□□ -0.86
GCNT3-201ENST00000396065 CHUKO15111 745 aa9.65□□□□□ -0.86
GCNT3-201ENST00000396065 CCDC122Q5T0U0 273 aa9.65□□□□□ -0.86
GCNT3-201ENST00000396065 ARMC9Q7Z3E5 817 aa9.65□□□□□ -0.86
GCNT3-201ENST00000396065 PDCD7Q8N8D1 485 aaKnown RBP9.65□□□□□ -0.86
GCNT3-201ENST00000396065 FAM212AQ96EL1 285 aa9.65□□□□□ -0.86
GCNT3-201ENST00000396065 USP16Q9Y5T5 823 aa9.65□□□□□ -0.86
GCNT3-201ENST00000396065 U3KPZ7 1027 aaPredicted RBP9.65□□□□□ -0.86
GCNT3-201ENST00000396065 ZWINTO95229 277 aa9.65□□□□□ -0.86
GCNT3-201ENST00000396065 PSMD2Q13200 908 aa9.65□□□□□ -0.86
GCNT3-201ENST00000396065 PRR16Q569H4 304 aa9.65□□□□□ -0.86
GCNT3-201ENST00000396065 NUTM2DQ5VT03 806 aaPredicted RBP9.65□□□□□ -0.86
GCNT3-201ENST00000396065 PLVAPQ9BX97 442 aa9.65□□□□□ -0.86
GCNT3-201ENST00000396065 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.65□□□□□ -0.86
GCNT3-201ENST00000396065 PDE11AQ9HCR9 933 aa9.65□□□□□ -0.86
GCNT3-201ENST00000396065 ATP2A2P16615 1042 aaKnown RBP9.65□□□□□ -0.87
GCNT3-201ENST00000396065 RASSF2P50749 326 aa9.65□□□□□ -0.87
GCNT3-201ENST00000396065 TRIM47Q96LD4 638 aa9.65□□□□□ -0.87
GCNT3-201ENST00000396065 NACAP1Q9BZK3 213 aa9.65□□□□□ -0.87
GCNT3-201ENST00000396065 PPP1R9AQ9ULJ8 1098 aa9.65□□□□□ -0.87
GCNT3-201ENST00000396065 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.65□□□□□ -0.87
GCNT3-201ENST00000396065 EFCAB8A8MWE9 144 aa9.64□□□□□ -0.87
GCNT3-201ENST00000396065 CCT2P78371 535 aaKnown RBP9.64□□□□□ -0.87
GCNT3-201ENST00000396065 TADA2BQ86TJ2 420 aa9.64□□□□□ -0.87
GCNT3-201ENST00000396065 IQCA1Q86XH1 822 aa9.64□□□□□ -0.87
GCNT3-201ENST00000396065 CCDC63Q8NA47 563 aa9.64□□□□□ -0.87
GCNT3-201ENST00000396065 SREK1Q8WXA9 508 aaKnown RBP9.64□□□□□ -0.87
GCNT3-201ENST00000396065 RAB3IPQ96QF0 476 aaPredicted RBP9.64□□□□□ -0.87
GCNT3-201ENST00000396065 YY1AP1Q9H869 796 aa9.64□□□□□ -0.87
GCNT3-201ENST00000396065 DDX21Q9NR30 783 aaKnown RBP eCLIP9.64□□□□□ -0.87
GCNT3-201ENST00000396065 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.64□□□□□ -0.87
GCNT3-201ENST00000396065 NKTRP30414 1462 aaKnown RBP9.64□□□□□ -0.87
GCNT3-201ENST00000396065 IDEP14735 1019 aa9.64□□□□□ -0.87
GCNT3-201ENST00000396065 ATP2B2Q01814 1243 aa9.64□□□□□ -0.87
GCNT3-201ENST00000396065 CCDC25Q86WR0 208 aa9.64□□□□□ -0.87
GCNT3-201ENST00000396065 GDAP1L1Q96MZ0 367 aa9.64□□□□□ -0.87
GCNT3-201ENST00000396065 YIPF3Q9GZM5 350 aa9.64□□□□□ -0.87
GCNT3-201ENST00000396065 ATP5DP30049 168 aa9.64□□□□□ -0.87
GCNT3-201ENST00000396065 SAMD1Q6SPF0 538 aaPredicted RBP9.64□□□□□ -0.87
GCNT3-201ENST00000396065 IFT20Q8IY31 132 aa9.64□□□□□ -0.87
GCNT3-201ENST00000396065 KCNG4Q8TDN1 519 aa9.64□□□□□ -0.87
GCNT3-201ENST00000396065 SYTL4Q96C24 671 aaPredicted RBP9.64□□□□□ -0.87
GCNT3-201ENST00000396065 SCAPERQ9BY12 1400 aa9.64□□□□□ -0.87
GCNT3-201ENST00000396065 FYB2Q5VWT5 728 aa9.64□□□□□ -0.87
GCNT3-201ENST00000396065 CNGA4Q8IV77 575 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms