RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 TSPY3P0CV98 308 aa19.83■□□□□ 0.77
UBFD1-201ENST00000395878 TSPY8P0CW00 308 aa19.83■□□□□ 0.77
UBFD1-201ENST00000395878 NMIQ13287 307 aaPredicted RBP19.83■□□□□ 0.77
UBFD1-201ENST00000395878 NBPF6Q5VWK0 638 aa19.83■□□□□ 0.77
UBFD1-201ENST00000395878 NBPF5PQ86XG9 351 aaPredicted RBP19.83■□□□□ 0.77
UBFD1-201ENST00000395878 NBPF4Q96M43 638 aa19.83■□□□□ 0.77
UBFD1-201ENST00000395878 PRDM10Q9NQV6 1147 aa19.83■□□□□ 0.77
UBFD1-201ENST00000395878 POLKQ9UBT6 870 aa19.83■□□□□ 0.77
UBFD1-201ENST00000395878 SKILP12757 684 aa19.83■□□□□ 0.77
UBFD1-201ENST00000395878 CCDC175P0C221 793 aa19.83■□□□□ 0.76
UBFD1-201ENST00000395878 PRPF4BQ13523 1007 aaKnown RBP19.83■□□□□ 0.76
UBFD1-201ENST00000395878 RFC4P35249 363 aa19.82■□□□□ 0.76
UBFD1-201ENST00000395878 CEP85Q6P2H3 762 aa19.82■□□□□ 0.76
UBFD1-201ENST00000395878 PAG1Q9NWQ8 432 aa19.82■□□□□ 0.76
UBFD1-201ENST00000395878 TUBB4AP04350 444 aa19.82■□□□□ 0.76
UBFD1-201ENST00000395878 UHRF1BP1LA0JNW5 1464 aa19.82■□□□□ 0.76
UBFD1-201ENST00000395878 FLT4P35916 1363 aa19.82■□□□□ 0.76
UBFD1-201ENST00000395878 IBSPP21815 317 aaPredicted RBP19.82■□□□□ 0.76
UBFD1-201ENST00000395878 AFMP43652 599 aa19.82■□□□□ 0.76
UBFD1-201ENST00000395878 PIK3C2GO75747 1445 aa19.82■□□□□ 0.76
UBFD1-201ENST00000395878 EIF2AK4Q9P2K8 1649 aaKnown RBP19.82■□□□□ 0.76
UBFD1-201ENST00000395878 MYO1BO43795 1136 aa19.82■□□□□ 0.76
UBFD1-201ENST00000395878 VAMP4O75379 141 aa19.82■□□□□ 0.76
UBFD1-201ENST00000395878 DNM1Q05193 864 aaKnown RBP19.82■□□□□ 0.76
UBFD1-201ENST00000395878 NOLC1Q14978 699 aaKnown RBP eCLIP19.82■□□□□ 0.76
UBFD1-201ENST00000395878 SLC9C2Q5TAH2 1124 aa19.82■□□□□ 0.76
UBFD1-201ENST00000395878 CCDC186Q7Z3E2 898 aa19.82■□□□□ 0.76
UBFD1-201ENST00000395878 C16orf71Q8IYS4 520 aaPredicted RBP19.82■□□□□ 0.76
UBFD1-201ENST00000395878 PTPRKQ15262 1439 aa19.82■□□□□ 0.76
UBFD1-201ENST00000395878 RAPGEF6Q8TEU7 1601 aa19.81■□□□□ 0.76
UBFD1-201ENST00000395878 ITSN2Q9NZM3 1697 aa19.81■□□□□ 0.76
UBFD1-201ENST00000395878 LIG1P18858 919 aa19.81■□□□□ 0.76
UBFD1-201ENST00000395878 SMC5Q8IY18 1101 aa19.81■□□□□ 0.76
UBFD1-201ENST00000395878 ST5P78524 1137 aa19.81■□□□□ 0.76
UBFD1-201ENST00000395878 RNF187Q5TA31 235 aaPredicted RBP19.81■□□□□ 0.76
UBFD1-201ENST00000395878 FERMT2Q96AC1 680 aa19.81■□□□□ 0.76
UBFD1-201ENST00000395878 MTHFSDQ2M296 383 aaKnown RBP19.81■□□□□ 0.76
UBFD1-201ENST00000395878 WDR78Q5VTH9 848 aa19.81■□□□□ 0.76
UBFD1-201ENST00000395878 XRCC6P12956 609 aaKnown RBP eCLIP19.8■□□□□ 0.76
UBFD1-201ENST00000395878 SLC39A6Q13433 755 aa19.8■□□□□ 0.76
UBFD1-201ENST00000395878 MAATS1Q7Z4T9 603 aa19.8■□□□□ 0.76
UBFD1-201ENST00000395878 SAMM50Q9Y512 469 aa19.8■□□□□ 0.76
UBFD1-201ENST00000395878 PSMA7O14818 248 aa19.8■□□□□ 0.76
UBFD1-201ENST00000395878 GIMAP7Q8NHV1 300 aa19.8■□□□□ 0.76
UBFD1-201ENST00000395878 CLCN1P35523 988 aa19.8■□□□□ 0.76
UBFD1-201ENST00000395878 NAA16Q6N069 864 aaPredicted RBP19.8■□□□□ 0.76
UBFD1-201ENST00000395878 SPAG5Q96R06 1193 aa19.8■□□□□ 0.76
UBFD1-201ENST00000395878 ZFYVE9O95405 1425 aa19.8■□□□□ 0.76
UBFD1-201ENST00000395878 SPTLC2O15270 562 aa19.8■□□□□ 0.76
UBFD1-201ENST00000395878 GNAT2P19087 354 aa19.8■□□□□ 0.76
UBFD1-201ENST00000395878 CCDC174Q6PII3 467 aa19.8■□□□□ 0.76
UBFD1-201ENST00000395878 ZNF219Q9P2Y4 722 aaPredicted RBP19.8■□□□□ 0.76
UBFD1-201ENST00000395878 RAD50Q92878 1312 aa19.8■□□□□ 0.76
UBFD1-201ENST00000395878 A2MP01023 1474 aa19.79■□□□□ 0.76
UBFD1-201ENST00000395878 CALM1P0DP23 149 aa19.79■□□□□ 0.76
UBFD1-201ENST00000395878 CALM2P0DP24 149 aa19.79■□□□□ 0.76
UBFD1-201ENST00000395878 CALM3P0DP25 149 aa19.79■□□□□ 0.76
UBFD1-201ENST00000395878 RAB3GAP1Q15042 981 aa19.79■□□□□ 0.76
UBFD1-201ENST00000395878 AOPEPQ8N6M6 819 aa19.79■□□□□ 0.76
UBFD1-201ENST00000395878 INTS4Q96HW7 963 aaKnown RBP19.79■□□□□ 0.76
UBFD1-201ENST00000395878 DNAJC25Q9H1X3 360 aa19.79■□□□□ 0.76
UBFD1-201ENST00000395878 GTF2F1P35269 517 aaKnown RBP eCLIP19.79■□□□□ 0.76
UBFD1-201ENST00000395878 CHMP4BP1P59074 171 aa19.79■□□□□ 0.76
UBFD1-201ENST00000395878 ZBTB40Q9NUA8 1239 aa19.79■□□□□ 0.76
UBFD1-201ENST00000395878 RTL1A6NKG5 1358 aa19.79■□□□□ 0.76
UBFD1-201ENST00000395878 SOS1Q07889 1333 aaPredicted RBP19.79■□□□□ 0.76
UBFD1-201ENST00000395878 RNF113AO15541 343 aaKnown RBP19.79■□□□□ 0.76
UBFD1-201ENST00000395878 UBE2Q2Q8WVN8 375 aa19.79■□□□□ 0.76
UBFD1-201ENST00000395878 TRIM75PA6NK02 468 aa19.79■□□□□ 0.76
UBFD1-201ENST00000395878 SLC4A8Q2Y0W8 1093 aa19.79■□□□□ 0.76
UBFD1-201ENST00000395878 ZSWIM4Q9H7M6 989 aa19.79■□□□□ 0.76
UBFD1-201ENST00000395878 NPHP3Q7Z494 1330 aa19.78■□□□□ 0.76
UBFD1-201ENST00000395878 CTAGE15A4D2H0 777 aa19.78■□□□□ 0.76
UBFD1-201ENST00000395878 CTAGE8P0CG41 777 aa19.78■□□□□ 0.76
UBFD1-201ENST00000395878 CTAGE6Q86UF2 777 aa19.78■□□□□ 0.76
UBFD1-201ENST00000395878 CTAGE4Q8IX94 777 aa19.78■□□□□ 0.76
UBFD1-201ENST00000395878 TBC1D5Q92609 795 aa19.78■□□□□ 0.76
UBFD1-201ENST00000395878 PA2G4Q9UQ80 394 aaKnown RBP19.78■□□□□ 0.76
UBFD1-201ENST00000395878 PLVAPQ9BX97 442 aa19.78■□□□□ 0.76
UBFD1-201ENST00000395878 RIMS2Q9UQ26 1411 aa19.78■□□□□ 0.76
UBFD1-201ENST00000395878 RTL9Q8NET4 1388 aa19.78■□□□□ 0.76
UBFD1-201ENST00000395878 ZNF608Q9ULD9 1512 aaPredicted RBP19.78■□□□□ 0.76
UBFD1-201ENST00000395878 GIGYF2Q6Y7W6 1299 aaKnown RBP19.78■□□□□ 0.76
UBFD1-201ENST00000395878 FSD2A1L4K1 749 aa19.78■□□□□ 0.76
UBFD1-201ENST00000395878 MARCKSP29966 332 aaPredicted RBP19.78■□□□□ 0.76
UBFD1-201ENST00000395878 USP37Q86T82 979 aa19.78■□□□□ 0.76
UBFD1-201ENST00000395878 CEP112Q8N8E3 955 aa19.78■□□□□ 0.76
UBFD1-201ENST00000395878 BBXQ8WY36 941 aaPredicted RBP19.78■□□□□ 0.76
UBFD1-201ENST00000395878 STAMBPO95630 424 aa19.77■□□□□ 0.76
UBFD1-201ENST00000395878 AK2P54819 239 aa19.77■□□□□ 0.76
UBFD1-201ENST00000395878 HEATR3Q7Z4Q2 680 aa19.77■□□□□ 0.76
UBFD1-201ENST00000395878 ZKSCAN5Q9Y2L8 839 aa19.77■□□□□ 0.76
UBFD1-201ENST00000395878 KIAA0753Q2KHM9 967 aa19.77■□□□□ 0.76
UBFD1-201ENST00000395878 NLRP3Q96P20 1036 aa19.77■□□□□ 0.76
UBFD1-201ENST00000395878 MSH6P52701 1360 aa19.77■□□□□ 0.76
UBFD1-201ENST00000395878 CREB3L3Q68CJ9 461 aa19.77■□□□□ 0.76
UBFD1-201ENST00000395878 SPECC1LQ69YQ0 1117 aa19.77■□□□□ 0.76
UBFD1-201ENST00000395878 ZNF830Q96NB3 372 aaPredicted RBP19.77■□□□□ 0.76
UBFD1-201ENST00000395878 SRRTQ9BXP5 876 aaKnown RBP19.77■□□□□ 0.76
UBFD1-201ENST00000395878 DMRT2Q9Y5R5 561 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms