RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 WWC2Q6AWC2 1192 aa10.44□□□□□ -0.74
MSH5-205ENST00000395853 PRPF38AQ8NAV1 312 aaKnown RBP10.44□□□□□ -0.74
MSH5-205ENST00000395853 GIMAP7Q8NHV1 300 aa10.44□□□□□ -0.74
MSH5-205ENST00000395853 AK7Q96M32 723 aa10.44□□□□□ -0.74
MSH5-205ENST00000395853 DIAPH1O60610 1272 aaKnown RBP10.43□□□□□ -0.74
MSH5-205ENST00000395853 MNAT1P51948 309 aa10.43□□□□□ -0.74
MSH5-205ENST00000395853 ST5P78524 1137 aa10.43□□□□□ -0.74
MSH5-205ENST00000395853 ZRSR2Q15696 482 aaKnown RBP10.43□□□□□ -0.74
MSH5-205ENST00000395853 DDX46Q7L014 1031 aaKnown RBP10.43□□□□□ -0.74
MSH5-205ENST00000395853 TRIM74Q86UV6 250 aa10.43□□□□□ -0.74
MSH5-205ENST00000395853 TRIM73Q86UV7 250 aa10.43□□□□□ -0.74
MSH5-205ENST00000395853 ZNF428Q96B54 188 aa10.43□□□□□ -0.74
MSH5-205ENST00000395853 TMEM63CQ9P1W3 806 aa10.43□□□□□ -0.74
MSH5-205ENST00000395853 PTGER2P43116 358 aa10.43□□□□□ -0.74
MSH5-205ENST00000395853 CCDC26Q8TAB7 109 aa10.43□□□□□ -0.74
MSH5-205ENST00000395853 SH3GL3Q99963 347 aa10.43□□□□□ -0.74
MSH5-205ENST00000395853 PYCARDQ9ULZ3 195 aa10.43□□□□□ -0.74
MSH5-205ENST00000395853 FHOD1Q9Y613 1164 aa10.43□□□□□ -0.74
MSH5-205ENST00000395853 COL18A1P39060 1754 aa10.43□□□□□ -0.74
MSH5-205ENST00000395853 CHD4Q14839 1912 aa10.43□□□□□ -0.74
MSH5-205ENST00000395853 POLR3GO15318 223 aaPredicted RBP10.42□□□□□ -0.74
MSH5-205ENST00000395853 CCP110O43303 1012 aa10.42□□□□□ -0.74
MSH5-205ENST00000395853 TMPOP42166 694 aaKnown RBP10.42□□□□□ -0.74
MSH5-205ENST00000395853 FOXD4L6Q3SYB3 417 aaPredicted RBP10.42□□□□□ -0.74
MSH5-205ENST00000395853 FOXD4L3Q6VB84 417 aaPredicted RBP10.42□□□□□ -0.74
MSH5-205ENST00000395853 CCDC186Q7Z3E2 898 aa10.42□□□□□ -0.74
MSH5-205ENST00000395853 ZNF784Q8NCA9 323 aaPredicted RBP10.42□□□□□ -0.74
MSH5-205ENST00000395853 RTF1Q92541 710 aaKnown RBP10.42□□□□□ -0.74
MSH5-205ENST00000395853 THOC1Q96FV9 657 aaKnown RBP10.42□□□□□ -0.74
MSH5-205ENST00000395853 STK32BQ9NY57 414 aa10.42□□□□□ -0.74
MSH5-205ENST00000395853 AKAP12Q02952 1782 aa10.42□□□□□ -0.74
MSH5-205ENST00000395853 MAP3K5Q99683 1374 aa10.42□□□□□ -0.74
MSH5-205ENST00000395853 KDM4AO75164 1064 aa10.42□□□□□ -0.74
MSH5-205ENST00000395853 EIF3JO75822 258 aaKnown RBP10.42□□□□□ -0.74
MSH5-205ENST00000395853 ADCY5O95622 1261 aa10.42□□□□□ -0.74
MSH5-205ENST00000395853 USP8P40818 1118 aa10.42□□□□□ -0.74
MSH5-205ENST00000395853 RWDD2BP57060 319 aa10.42□□□□□ -0.74
MSH5-205ENST00000395853 ZRSR1Q15695 479 aaKnown RBP10.42□□□□□ -0.74
MSH5-205ENST00000395853 EDC4Q6P2E9 1401 aaKnown RBP10.42□□□□□ -0.74
MSH5-205ENST00000395853 USP25Q9UHP3 1055 aa10.42□□□□□ -0.74
MSH5-205ENST00000395853 TRIM35Q9UPQ4 493 aa10.42□□□□□ -0.74
MSH5-205ENST00000395853 WDR17Q8IZU2 1322 aa10.42□□□□□ -0.74
MSH5-205ENST00000395853 SETSIPP0DME0 302 aa10.42□□□□□ -0.74
MSH5-205ENST00000395853 RNF20Q5VTR2 975 aa10.42□□□□□ -0.74
MSH5-205ENST00000395853 TTLL5Q6EMB2 1281 aa10.42□□□□□ -0.74
MSH5-205ENST00000395853 PROM2Q8N271 834 aa10.42□□□□□ -0.74
MSH5-205ENST00000395853 STAG1Q8WVM7 1258 aa10.42□□□□□ -0.74
MSH5-205ENST00000395853 FOXD4L1Q9NU39 408 aa10.42□□□□□ -0.74
MSH5-205ENST00000395853 EMILIN1Q9Y6C2 1016 aa10.42□□□□□ -0.74
MSH5-205ENST00000395853 MON2Q7Z3U7 1717 aa10.41□□□□□ -0.74
MSH5-205ENST00000395853 USP6P35125 1406 aa10.41□□□□□ -0.74
MSH5-205ENST00000395853 MYBL2P10244 700 aa10.41□□□□□ -0.74
MSH5-205ENST00000395853 PLA2G4AP47712 749 aa10.41□□□□□ -0.74
MSH5-205ENST00000395853 RARSP54136 660 aaKnown RBP10.41□□□□□ -0.74
MSH5-205ENST00000395853 CORO7P57737 925 aa10.41□□□□□ -0.74
MSH5-205ENST00000395853 PSMD2Q13200 908 aa10.41□□□□□ -0.74
MSH5-205ENST00000395853 TEX11Q8IYF3 940 aa10.41□□□□□ -0.74
MSH5-205ENST00000395853 MTFR1LQ9H019 292 aa10.41□□□□□ -0.74
MSH5-205ENST00000395853 ABCC6O95255 1503 aa10.41□□□□□ -0.74
MSH5-205ENST00000395853 PPFIA2O75334 1257 aa10.41□□□□□ -0.74
MSH5-205ENST00000395853 PRPF40AO75400 957 aaKnown RBP10.41□□□□□ -0.74
MSH5-205ENST00000395853 FAM163BP0C2L3 166 aa10.41□□□□□ -0.74
MSH5-205ENST00000395853 ACTN2P35609 894 aa10.41□□□□□ -0.74
MSH5-205ENST00000395853 TBC1D8BQ0IIM8 1120 aa10.41□□□□□ -0.74
MSH5-205ENST00000395853 SLC15A2Q16348 729 aa10.41□□□□□ -0.74
MSH5-205ENST00000395853 TOM1L2Q6ZVM7 507 aa10.41□□□□□ -0.74
MSH5-205ENST00000395853 ZSCAN16Q9H4T2 348 aaPredicted RBP10.41□□□□□ -0.74
MSH5-205ENST00000395853 PNMA6AP0CW24 399 aaPredicted RBP10.4□□□□□ -0.74
MSH5-205ENST00000395853 CD151P48509 253 aa10.4□□□□□ -0.74
MSH5-205ENST00000395853 PROCA1Q8NCQ7 364 aaPredicted RBP10.4□□□□□ -0.74
MSH5-205ENST00000395853 PANK1Q8TE04 598 aa10.4□□□□□ -0.74
MSH5-205ENST00000395853 TSR2Q969E8 191 aaKnown RBP10.4□□□□□ -0.74
MSH5-205ENST00000395853 C16orf45Q96MC5 204 aaPredicted RBP10.4□□□□□ -0.74
MSH5-205ENST00000395853 BCL2L13Q9BXK5 485 aa10.4□□□□□ -0.74
MSH5-205ENST00000395853 TRIM6Q9C030 488 aaPredicted RBP10.4□□□□□ -0.74
MSH5-205ENST00000395853 GOLGA6CA6NDK9 693 aa10.4□□□□□ -0.75
MSH5-205ENST00000395853 GOLGA6BA6NDN3 693 aa10.4□□□□□ -0.75
MSH5-205ENST00000395853 ECEL1O95672 775 aa10.4□□□□□ -0.75
MSH5-205ENST00000395853 GOLGA6DP0CG33 693 aa10.4□□□□□ -0.75
MSH5-205ENST00000395853 ELF2Q15723 593 aa10.4□□□□□ -0.75
MSH5-205ENST00000395853 TXNRD1Q16881 649 aa10.4□□□□□ -0.75
MSH5-205ENST00000395853 LEKR1Q6ZMV7 388 aa10.4□□□□□ -0.75
MSH5-205ENST00000395853 EFCAB13Q8IY85 973 aa10.4□□□□□ -0.75
MSH5-205ENST00000395853 MARCH10Q8NA82 808 aaPredicted RBP10.4□□□□□ -0.75
MSH5-205ENST00000395853 ACRBPQ8NEB7 543 aa10.4□□□□□ -0.75
MSH5-205ENST00000395853 ERO1AQ96HE7 468 aa10.4□□□□□ -0.75
MSH5-205ENST00000395853 SYT17Q9BSW7 474 aa10.4□□□□□ -0.75
MSH5-205ENST00000395853 GNL3LQ9NVN8 582 aaKnown RBP10.4□□□□□ -0.75
MSH5-205ENST00000395853 GOLGA6AQ9NYA3 693 aa10.4□□□□□ -0.75
MSH5-205ENST00000395853 PSD3Q9NYI0 1048 aa10.4□□□□□ -0.75
MSH5-205ENST00000395853 ZNF232Q9UNY5 417 aa10.4□□□□□ -0.75
MSH5-205ENST00000395853 TNNQ9UQP3 1299 aa10.4□□□□□ -0.75
MSH5-205ENST00000395853 K7ELQ4 463 aaPredicted RBP10.39□□□□□ -0.75
MSH5-205ENST00000395853 SKILP12757 684 aa10.39□□□□□ -0.75
MSH5-205ENST00000395853 MAGEA8P43361 318 aa10.39□□□□□ -0.75
MSH5-205ENST00000395853 NLRP6P59044 892 aa10.39□□□□□ -0.75
MSH5-205ENST00000395853 GBP6Q6ZN66 633 aa10.39□□□□□ -0.75
MSH5-205ENST00000395853 KCNH5Q8NCM2 988 aa10.39□□□□□ -0.75
MSH5-205ENST00000395853 ZNF483Q8TF39 744 aaPredicted RBP10.39□□□□□ -0.75
MSH5-205ENST00000395853 SGIP1Q9BQI5 828 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms