RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 ZKSCAN3Q9BRR0 538 aa18.82■□□□□ 0.6
SMARCD1-202ENST00000394963 NALCNQ8IZF0 1738 aa18.82■□□□□ 0.6
SMARCD1-202ENST00000394963 ANAPC15P60006 121 aa18.82■□□□□ 0.6
SMARCD1-202ENST00000394963 CCDC87Q9NVE4 849 aa18.82■□□□□ 0.6
SMARCD1-202ENST00000394963 IMMTQ16891 758 aaKnown RBP18.82■□□□□ 0.6
SMARCD1-202ENST00000394963 OTUD7BQ6GQQ9 843 aa18.82■□□□□ 0.6
SMARCD1-202ENST00000394963 GIGYF2Q6Y7W6 1299 aaKnown RBP18.82■□□□□ 0.6
SMARCD1-202ENST00000394963 USP21Q9UK80 565 aa18.82■□□□□ 0.6
SMARCD1-202ENST00000394963 ZNF213O14771 459 aa18.81■□□□□ 0.6
SMARCD1-202ENST00000394963 MICU3Q86XE3 530 aa18.81■□□□□ 0.6
SMARCD1-202ENST00000394963 A0A0G2JLW4 131 aa18.81■□□□□ 0.6
SMARCD1-202ENST00000394963 PTMSP20962 102 aa18.81■□□□□ 0.6
SMARCD1-202ENST00000394963 MSNP26038 577 aaKnown RBP18.81■□□□□ 0.6
SMARCD1-202ENST00000394963 COL9A3Q14050 684 aaPredicted RBP18.81■□□□□ 0.6
SMARCD1-202ENST00000394963 NLRP10Q86W26 655 aa18.81■□□□□ 0.6
SMARCD1-202ENST00000394963 ANKIB1Q9P2G1 1089 aa18.81■□□□□ 0.6
SMARCD1-202ENST00000394963 U3KPZ7 1027 aaPredicted RBP18.81■□□□□ 0.6
SMARCD1-202ENST00000394963 GOLGB1Q14789 3259 aaKnown RBP18.81■□□□□ 0.6
SMARCD1-202ENST00000394963 SH3TC1Q8TE82 1336 aa18.81■□□□□ 0.6
SMARCD1-202ENST00000394963 TULP1O00294 542 aaPredicted RBP18.81■□□□□ 0.6
SMARCD1-202ENST00000394963 POLR3DP05423 398 aaPredicted RBP18.81■□□□□ 0.6
SMARCD1-202ENST00000394963 SCARF1Q14162 830 aa18.81■□□□□ 0.6
SMARCD1-202ENST00000394963 KBTBD3Q8NAB2 608 aa18.81■□□□□ 0.6
SMARCD1-202ENST00000394963 TPCN1Q9ULQ1 816 aa18.81■□□□□ 0.6
SMARCD1-202ENST00000394963 MAP3K15Q6ZN16 1313 aa18.81■□□□□ 0.6
SMARCD1-202ENST00000394963 KNDC1Q76NI1 1749 aa18.8■□□□□ 0.6
SMARCD1-202ENST00000394963 H7C1W4 665 aa18.8■□□□□ 0.6
SMARCD1-202ENST00000394963 ATP5JP18859 108 aa18.8■□□□□ 0.6
SMARCD1-202ENST00000394963 PHKA1P46020 1223 aa18.8■□□□□ 0.6
SMARCD1-202ENST00000394963 GAS2L3Q86XJ1 694 aa18.8■□□□□ 0.6
SMARCD1-202ENST00000394963 CKAP2LQ8IYA6 745 aa18.8■□□□□ 0.6
SMARCD1-202ENST00000394963 GPHNQ9NQX3 736 aaPredicted RBP18.8■□□□□ 0.6
SMARCD1-202ENST00000394963 SRP68Q9UHB9 627 aaKnown RBP18.8■□□□□ 0.6
SMARCD1-202ENST00000394963 ZBTB38Q8NAP3 1195 aaPredicted RBP18.8■□□□□ 0.6
SMARCD1-202ENST00000394963 FOXO4P98177 505 aa18.8■□□□□ 0.6
SMARCD1-202ENST00000394963 MAGEB6Q8N7X4 407 aa18.8■□□□□ 0.6
SMARCD1-202ENST00000394963 TFCP2L1Q9NZI6 479 aa18.8■□□□□ 0.6
SMARCD1-202ENST00000394963 NSFL1CQ9UNZ2 370 aaKnown RBP18.8■□□□□ 0.6
SMARCD1-202ENST00000394963 NAPBQ9H115 298 aa18.79■□□□□ 0.6
SMARCD1-202ENST00000394963 ZNF652Q9Y2D9 606 aa18.79■□□□□ 0.6
SMARCD1-202ENST00000394963 RNF113AO15541 343 aaKnown RBP18.79■□□□□ 0.6
SMARCD1-202ENST00000394963 BCAMP50895 628 aa18.79■□□□□ 0.6
SMARCD1-202ENST00000394963 MTX1Q13505 466 aa18.79■□□□□ 0.6
SMARCD1-202ENST00000394963 SUSD4Q5VX71 490 aa18.79■□□□□ 0.6
SMARCD1-202ENST00000394963 SLC5A1P13866 664 aa18.78■□□□□ 0.6
SMARCD1-202ENST00000394963 PRKCSHP14314 528 aaPredicted RBP18.78■□□□□ 0.6
SMARCD1-202ENST00000394963 RFC4P35249 363 aa18.78■□□□□ 0.6
SMARCD1-202ENST00000394963 PTF1AQ7RTS3 328 aa18.78■□□□□ 0.6
SMARCD1-202ENST00000394963 AK9Q5TCS8 1911 aa18.78■□□□□ 0.6
SMARCD1-202ENST00000394963 CTSWP56202 376 aa18.78■□□□□ 0.6
SMARCD1-202ENST00000394963 ZSCAN23Q3MJ62 389 aa18.78■□□□□ 0.6
SMARCD1-202ENST00000394963 MYL10Q9BUA6 226 aa18.78■□□□□ 0.6
SMARCD1-202ENST00000394963 CCNL1Q9UK58 526 aaPredicted RBP18.78■□□□□ 0.6
SMARCD1-202ENST00000394963 GIMAP6Q6P9H5 292 aa18.78■□□□□ 0.6
SMARCD1-202ENST00000394963 MARCH10Q8NA82 808 aaPredicted RBP18.78■□□□□ 0.6
SMARCD1-202ENST00000394963 SETDB2Q96T68 719 aa18.78■□□□□ 0.6
SMARCD1-202ENST00000394963 GOLGA8BA8MQT2 603 aa18.77■□□□□ 0.6
SMARCD1-202ENST00000394963 CYP21A2P08686 494 aa18.77■□□□□ 0.6
SMARCD1-202ENST00000394963 GYG1P46976 350 aa18.77■□□□□ 0.6
SMARCD1-202ENST00000394963 ANKRD1Q15327 319 aa18.77■□□□□ 0.6
SMARCD1-202ENST00000394963 SYNE3Q6ZMZ3 975 aa18.77■□□□□ 0.6
SMARCD1-202ENST00000394963 SPATA32Q96LK8 384 aa18.77■□□□□ 0.6
SMARCD1-202ENST00000394963 NCAPD2Q15021 1401 aa18.77■□□□□ 0.59
SMARCD1-202ENST00000394963 ZSCAN22P10073 491 aaPredicted RBP18.77■□□□□ 0.59
SMARCD1-202ENST00000394963 CYP19A1P11511 503 aaPredicted RBP18.77■□□□□ 0.59
SMARCD1-202ENST00000394963 KRT32Q14532 448 aa18.77■□□□□ 0.59
SMARCD1-202ENST00000394963 CCDC152Q4G0S7 254 aa18.77■□□□□ 0.59
SMARCD1-202ENST00000394963 ZSCAN31Q96LW9 406 aaPredicted RBP18.77■□□□□ 0.59
SMARCD1-202ENST00000394963 INCENPQ9NQS7 918 aa18.77■□□□□ 0.59
SMARCD1-202ENST00000394963 FMN2Q9NZ56 1722 aa18.77■□□□□ 0.59
SMARCD1-202ENST00000394963 PDE8AO60658 829 aa18.76■□□□□ 0.59
SMARCD1-202ENST00000394963 TTLL11Q8NHH1 800 aa18.76■□□□□ 0.59
SMARCD1-202ENST00000394963 KRT85P78386 507 aa18.76■□□□□ 0.59
SMARCD1-202ENST00000394963 USPL1Q5W0Q7 1092 aa18.76■□□□□ 0.59
SMARCD1-202ENST00000394963 KLHL34Q8N239 644 aa18.76■□□□□ 0.59
SMARCD1-202ENST00000394963 KLF18A0A0U1RQI7 1052 aa18.76■□□□□ 0.59
SMARCD1-202ENST00000394963 GPAA1O43292 621 aa18.76■□□□□ 0.59
SMARCD1-202ENST00000394963 PRDM1O75626 825 aa18.76■□□□□ 0.59
SMARCD1-202ENST00000394963 ME1P48163 572 aa18.76■□□□□ 0.59
SMARCD1-202ENST00000394963 AK7Q96M32 723 aa18.76■□□□□ 0.59
SMARCD1-202ENST00000394963 ARMT1Q9H993 441 aa18.76■□□□□ 0.59
SMARCD1-202ENST00000394963 AOX1Q06278 1338 aa18.75■□□□□ 0.59
SMARCD1-202ENST00000394963 CREBRFQ8IUR6 639 aa18.75■□□□□ 0.59
SMARCD1-202ENST00000394963 MAP3K12Q12852 859 aa18.75■□□□□ 0.59
SMARCD1-202ENST00000394963 SAMD1Q6SPF0 538 aaPredicted RBP18.75■□□□□ 0.59
SMARCD1-202ENST00000394963 ANKRD18AQ8IVF6 992 aa18.75■□□□□ 0.59
SMARCD1-202ENST00000394963 OSBP2Q969R2 916 aa18.75■□□□□ 0.59
SMARCD1-202ENST00000394963 SLC4A9Q96Q91 983 aa18.75■□□□□ 0.59
SMARCD1-202ENST00000394963 PCCAP05165 728 aaPredicted RBP18.75■□□□□ 0.59
SMARCD1-202ENST00000394963 KLHL40Q2TBA0 621 aa18.75■□□□□ 0.59
SMARCD1-202ENST00000394963 ATG9AQ7Z3C6 839 aa18.75■□□□□ 0.59
SMARCD1-202ENST00000394963 SPC24Q8NBT2 197 aa18.75■□□□□ 0.59
SMARCD1-202ENST00000394963 HAUS7Q99871 368 aa18.75■□□□□ 0.59
SMARCD1-202ENST00000394963 NFAT5O94916 1531 aa18.74■□□□□ 0.59
SMARCD1-202ENST00000394963 LTN1O94822 1766 aa18.74■□□□□ 0.59
SMARCD1-202ENST00000394963 PDCP20941 246 aa18.74■□□□□ 0.59
SMARCD1-202ENST00000394963 CDC37L1Q7L3B6 337 aa18.74■□□□□ 0.59
SMARCD1-202ENST00000394963 XRN1Q8IZH2 1706 aaKnown RBP18.74■□□□□ 0.59
SMARCD1-202ENST00000394963 RANBP6O60518 1105 aaKnown RBP18.74■□□□□ 0.59
SMARCD1-202ENST00000394963 MAP4K1Q92918 833 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms