RNA–Protein interactions for RNA: ENST00000394686.3

SGMS2-203, Transcript of sphingomyelin synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS2, Length 2,127 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2-203ENST00000394686 PLCB3Q01970 1234 aa7.99□□□□□ -1.13
SGMS2-203ENST00000394686 CC2D1BQ5T0F9 858 aaKnown RBP7.99□□□□□ -1.13
SGMS2-203ENST00000394686 GPR153Q6NV75 609 aa7.99□□□□□ -1.13
SGMS2-203ENST00000394686 LRSAM1Q6UWE0 723 aa7.99□□□□□ -1.13
SGMS2-203ENST00000394686 STAG1Q8WVM7 1258 aa7.99□□□□□ -1.13
SGMS2-203ENST00000394686 PIBF1Q8WXW3 757 aa7.99□□□□□ -1.13
SGMS2-203ENST00000394686 CARD14Q9BXL6 1004 aa7.99□□□□□ -1.13
SGMS2-203ENST00000394686 RBSNQ9H1K0 784 aa7.99□□□□□ -1.13
SGMS2-203ENST00000394686 PANK3Q9H999 370 aa7.99□□□□□ -1.13
SGMS2-203ENST00000394686 IFT57Q9NWB7 429 aa7.99□□□□□ -1.13
SGMS2-203ENST00000394686 COL4A3BPQ9Y5P4 624 aa7.99□□□□□ -1.13
SGMS2-203ENST00000394686 PREX1Q8TCU6 1659 aa7.98□□□□□ -1.13
SGMS2-203ENST00000394686 TRAPPC8Q9Y2L5 1435 aa7.98□□□□□ -1.13
SGMS2-203ENST00000394686 PTPRMP28827 1452 aa7.98□□□□□ -1.13
SGMS2-203ENST00000394686 MAST1Q9Y2H9 1570 aa7.98□□□□□ -1.13
SGMS2-203ENST00000394686 EIF1AXP47813 144 aaKnown RBP7.98□□□□□ -1.13
SGMS2-203ENST00000394686 ANAPC15P60006 121 aa7.98□□□□□ -1.13
SGMS2-203ENST00000394686 HDAC1Q13547 482 aaPredicted RBP7.98□□□□□ -1.13
SGMS2-203ENST00000394686 UVSSAQ2YD98 709 aa7.98□□□□□ -1.13
SGMS2-203ENST00000394686 FILIP1Q7Z7B0 1213 aa7.98□□□□□ -1.13
SGMS2-203ENST00000394686 TEX2Q8IWB9 1127 aa7.98□□□□□ -1.13
SGMS2-203ENST00000394686 SYNMO15061 1565 aa7.98□□□□□ -1.13
SGMS2-203ENST00000394686 FGRP09769 529 aa7.97□□□□□ -1.13
SGMS2-203ENST00000394686 GNL2Q13823 731 aaKnown RBP7.97□□□□□ -1.13
SGMS2-203ENST00000394686 ANKRD7Q92527 254 aa7.97□□□□□ -1.13
SGMS2-203ENST00000394686 ZNF830Q96NB3 372 aaPredicted RBP7.97□□□□□ -1.13
SGMS2-203ENST00000394686 NIF3L1Q9GZT8 377 aa7.97□□□□□ -1.13
SGMS2-203ENST00000394686 SPTLC3Q9NUV7 552 aa7.97□□□□□ -1.13
SGMS2-203ENST00000394686 KANK1Q14678 1352 aa7.97□□□□□ -1.13
SGMS2-203ENST00000394686 PNMA6FA0A0J9YX94 578 aa7.97□□□□□ -1.13
SGMS2-203ENST00000394686 ZBTB39O15060 712 aa7.97□□□□□ -1.13
SGMS2-203ENST00000394686 FAM13AO94988 1023 aa7.97□□□□□ -1.13
SGMS2-203ENST00000394686 MBD3O95983 291 aa7.97□□□□□ -1.13
SGMS2-203ENST00000394686 NPR3P17342 541 aa7.97□□□□□ -1.13
SGMS2-203ENST00000394686 PTK2Q05397 1052 aa7.97□□□□□ -1.13
SGMS2-203ENST00000394686 ATP2B3Q16720 1220 aa7.97□□□□□ -1.13
SGMS2-203ENST00000394686 NKX2-3Q8TAU0 364 aa7.97□□□□□ -1.13
SGMS2-203ENST00000394686 CFHR5Q9BXR6 569 aa7.97□□□□□ -1.13
SGMS2-203ENST00000394686 CHPF2Q9P2E5 772 aa7.97□□□□□ -1.13
SGMS2-203ENST00000394686 ASXL1Q8IXJ9 1541 aa7.97□□□□□ -1.13
SGMS2-203ENST00000394686 TPM3P06753 285 aa7.96□□□□□ -1.13
SGMS2-203ENST00000394686 ZNF771Q7L3S4 317 aaPredicted RBP7.96□□□□□ -1.13
SGMS2-203ENST00000394686 FAM184AQ8NB25 1140 aa7.96□□□□□ -1.13
SGMS2-203ENST00000394686 ARMC5Q96C12 935 aa7.96□□□□□ -1.13
SGMS2-203ENST00000394686 TESK2Q96S53 571 aa7.96□□□□□ -1.13
SGMS2-203ENST00000394686 USB1Q9BQ65 265 aaKnown RBP7.96□□□□□ -1.13
SGMS2-203ENST00000394686 SRA1Q9HD15 236 aaKnown RBP7.96□□□□□ -1.13
SGMS2-203ENST00000394686 LMBRD1Q9NUN5 540 aa7.96□□□□□ -1.13
SGMS2-203ENST00000394686 SPAG9O60271 1321 aaKnown RBP7.96□□□□□ -1.13
SGMS2-203ENST00000394686 C3P01024 1663 aa7.96□□□□□ -1.14
SGMS2-203ENST00000394686 CT47B1P0C2W7 299 aaPredicted RBP7.96□□□□□ -1.14
SGMS2-203ENST00000394686 CHAF1AQ13111 956 aaPredicted RBP7.96□□□□□ -1.14
SGMS2-203ENST00000394686 NOLC1Q14978 699 aaKnown RBP eCLIP7.96□□□□□ -1.14
SGMS2-203ENST00000394686 USP48Q86UV5 1035 aa7.96□□□□□ -1.14
SGMS2-203ENST00000394686 PANK1Q8TE04 598 aa7.96□□□□□ -1.14
SGMS2-203ENST00000394686 TIGD1Q96MW7 591 aa7.96□□□□□ -1.14
SGMS2-203ENST00000394686 KANSL2Q9H9L4 492 aa7.96□□□□□ -1.14
SGMS2-203ENST00000394686 PCDH12Q9NPG4 1184 aa7.96□□□□□ -1.14
SGMS2-203ENST00000394686 CALCOCO1Q9P1Z2 691 aa7.96□□□□□ -1.14
SGMS2-203ENST00000394686 FAN1Q9Y2M0 1017 aa7.96□□□□□ -1.14
SGMS2-203ENST00000394686 KNSTRNQ9Y448 316 aa7.96□□□□□ -1.14
SGMS2-203ENST00000394686 ZC3H13Q5T200 1668 aaKnown RBP7.95□□□□□ -1.14
SGMS2-203ENST00000394686 SHANK2Q9UPX8 1470 aa7.95□□□□□ -1.14
SGMS2-203ENST00000394686 CTIFO43310 598 aaKnown RBP7.95□□□□□ -1.14
SGMS2-203ENST00000394686 PTCD1O75127 700 aaKnown RBP7.95□□□□□ -1.14
SGMS2-203ENST00000394686 CYP2E1P05181 493 aaPredicted RBP7.95□□□□□ -1.14
SGMS2-203ENST00000394686 PTMAP06454 111 aaKnown RBP7.95□□□□□ -1.14
SGMS2-203ENST00000394686 HOXB3P14651 431 aaPredicted RBP7.95□□□□□ -1.14
SGMS2-203ENST00000394686 MZF1P28698 734 aaPredicted RBP7.95□□□□□ -1.14
SGMS2-203ENST00000394686 RARSP54136 660 aaKnown RBP7.95□□□□□ -1.14
SGMS2-203ENST00000394686 CAVIN1Q6NZI2 390 aaKnown RBP7.95□□□□□ -1.14
SGMS2-203ENST00000394686 AFAP1Q8N556 730 aa7.95□□□□□ -1.14
SGMS2-203ENST00000394686 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.95□□□□□ -1.14
SGMS2-203ENST00000394686 CGNQ9P2M7 1197 aaKnown RBP7.95□□□□□ -1.14
SGMS2-203ENST00000394686 MAGEB6P1A0A0J9YX57 407 aa7.94□□□□□ -1.14
SGMS2-203ENST00000394686 STK10O94804 968 aaKnown RBP7.94□□□□□ -1.14
SGMS2-203ENST00000394686 IRX3P78415 501 aaPredicted RBP7.94□□□□□ -1.14
SGMS2-203ENST00000394686 CBLBQ13191 982 aa7.94□□□□□ -1.14
SGMS2-203ENST00000394686 SYAP1Q96A49 352 aaPredicted RBP7.94□□□□□ -1.14
SGMS2-203ENST00000394686 METTL14Q9HCE5 456 aaKnown RBP7.94□□□□□ -1.14
SGMS2-203ENST00000394686 CYLDQ9NQC7 956 aa7.94□□□□□ -1.14
SGMS2-203ENST00000394686 A2MP01023 1474 aa7.94□□□□□ -1.14
SGMS2-203ENST00000394686 SCAF11Q99590 1463 aaKnown RBP7.94□□□□□ -1.14
SGMS2-203ENST00000394686 ANKRD50Q9ULJ7 1429 aa7.94□□□□□ -1.14
SGMS2-203ENST00000394686 DISP3Q9P2K9 1392 aa7.94□□□□□ -1.14
SGMS2-203ENST00000394686 MVPQ14764 893 aaKnown RBP7.94□□□□□ -1.14
SGMS2-203ENST00000394686 PDXDC2PQ6P474 469 aa7.94□□□□□ -1.14
SGMS2-203ENST00000394686 WDR63Q8IWG1 891 aa7.94□□□□□ -1.14
SGMS2-203ENST00000394686 SCG3Q8WXD2 468 aaKnown RBP7.94□□□□□ -1.14
SGMS2-203ENST00000394686 ARHGAP9Q9BRR9 750 aa7.94□□□□□ -1.14
SGMS2-203ENST00000394686 YY1AP1Q9H869 796 aa7.94□□□□□ -1.14
SGMS2-203ENST00000394686 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.94□□□□□ -1.14
SGMS2-203ENST00000394686 RNF17Q9BXT8 1623 aaKnown RBP7.93□□□□□ -1.14
SGMS2-203ENST00000394686 TULP2O00295 520 aa7.93□□□□□ -1.14
SGMS2-203ENST00000394686 APAF1O14727 1248 aa7.93□□□□□ -1.14
SGMS2-203ENST00000394686 IBSPP21815 317 aaPredicted RBP7.93□□□□□ -1.14
SGMS2-203ENST00000394686 BMP2KLQ5H9B9 411 aa7.93□□□□□ -1.14
SGMS2-203ENST00000394686 TICAM2Q86XR7 235 aa7.93□□□□□ -1.14
SGMS2-203ENST00000394686 TNS4Q8IZW8 715 aa7.93□□□□□ -1.14
SGMS2-203ENST00000394686 CLTCQ00610 1675 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms