RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 LEO1Q8WVC0 666 aaPredicted RBP14.45□□□□□ -0.1
SLC28A1-203ENST00000394573 IPO7O95373 1038 aaKnown RBP14.44□□□□□ -0.1
SLC28A1-203ENST00000394573 BRD3Q15059 726 aa14.44□□□□□ -0.1
SLC28A1-203ENST00000394573 FAM71BQ8TC56 605 aa14.44□□□□□ -0.1
SLC28A1-203ENST00000394573 IRX2Q9BZI1 471 aaPredicted RBP14.44□□□□□ -0.1
SLC28A1-203ENST00000394573 FAM107BQ9H098 131 aa14.44□□□□□ -0.1
SLC28A1-203ENST00000394573 PICK1Q9NRD5 415 aa14.44□□□□□ -0.1
SLC28A1-203ENST00000394573 L1RE1Q9UN81 338 aa14.44□□□□□ -0.1
SLC28A1-203ENST00000394573 ANKRD33BA6NCL7 494 aa14.44□□□□□ -0.1
SLC28A1-203ENST00000394573 WDHD1O75717 1129 aaPredicted RBP14.44□□□□□ -0.1
SLC28A1-203ENST00000394573 SSBP05455 408 aaKnown RBP eCLIP14.44□□□□□ -0.1
SLC28A1-203ENST00000394573 ERCC3P19447 782 aa14.44□□□□□ -0.1
SLC28A1-203ENST00000394573 E2F5Q15329 346 aa14.44□□□□□ -0.1
SLC28A1-203ENST00000394573 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.44□□□□□ -0.1
SLC28A1-203ENST00000394573 CCDC150Q8NCX0 1101 aa14.44□□□□□ -0.1
SLC28A1-203ENST00000394573 SPATS2LQ9NUQ6 558 aaKnown RBP14.44□□□□□ -0.1
SLC28A1-203ENST00000394573 SOS1Q07889 1333 aaPredicted RBP14.44□□□□□ -0.1
SLC28A1-203ENST00000394573 VWA3AA6NCI4 1184 aa14.43□□□□□ -0.1
SLC28A1-203ENST00000394573 NRDCO43847 1150 aa14.43□□□□□ -0.1
SLC28A1-203ENST00000394573 GRIK3Q13003 919 aa14.43□□□□□ -0.1
SLC28A1-203ENST00000394573 KARSQ15046 597 aaKnown RBP14.43□□□□□ -0.1
SLC28A1-203ENST00000394573 STX1AQ16623 288 aa14.43□□□□□ -0.1
SLC28A1-203ENST00000394573 PREPLQ4J6C6 727 aaPredicted RBP14.43□□□□□ -0.1
SLC28A1-203ENST00000394573 CEP85Q6P2H3 762 aa14.43□□□□□ -0.1
SLC28A1-203ENST00000394573 ANKRD18AQ8IVF6 992 aa14.43□□□□□ -0.1
SLC28A1-203ENST00000394573 BAG1Q99933 345 aaPredicted RBP14.43□□□□□ -0.1
SLC28A1-203ENST00000394573 BSDC1Q9NW68 430 aaPredicted RBP14.43□□□□□ -0.1
SLC28A1-203ENST00000394573 CHUKO15111 745 aa14.43□□□□□ -0.1
SLC28A1-203ENST00000394573 VAMP4O75379 141 aa14.43□□□□□ -0.1
SLC28A1-203ENST00000394573 TSPY4P0CV99 314 aa14.43□□□□□ -0.1
SLC28A1-203ENST00000394573 TSPY10P0CW01 314 aa14.43□□□□□ -0.1
SLC28A1-203ENST00000394573 NAP1L1P55209 391 aaKnown RBP14.43□□□□□ -0.1
SLC28A1-203ENST00000394573 VSNL1P62760 191 aa14.43□□□□□ -0.1
SLC28A1-203ENST00000394573 ANKRD44Q8N8A2 993 aa14.43□□□□□ -0.1
SLC28A1-203ENST00000394573 ARMC2Q8NEN0 867 aa14.43□□□□□ -0.1
SLC28A1-203ENST00000394573 MICAL1Q8TDZ2 1067 aa14.43□□□□□ -0.1
SLC28A1-203ENST00000394573 KAT14Q9H8E8 782 aa14.43□□□□□ -0.1
SLC28A1-203ENST00000394573 SNX14Q9Y5W7 946 aa14.43□□□□□ -0.1
SLC28A1-203ENST00000394573 PPRC1Q5VV67 1664 aaKnown RBP14.43□□□□□ -0.1
SLC28A1-203ENST00000394573 ABCC4O15439 1325 aa14.43□□□□□ -0.1
SLC28A1-203ENST00000394573 EVC2Q86UK5 1308 aa14.43□□□□□ -0.1
SLC28A1-203ENST00000394573 ADGRL2O95490 1459 aa14.42□□□□□ -0.1
SLC28A1-203ENST00000394573 ABCA10Q8WWZ4 1543 aa14.42□□□□□ -0.1
SLC28A1-203ENST00000394573 LAMC1P11047 1609 aa14.42□□□□□ -0.1
SLC28A1-203ENST00000394573 PPP1R12BO60237 982 aaPredicted RBP14.42□□□□□ -0.1
SLC28A1-203ENST00000394573 RTN2O75298 545 aa14.42□□□□□ -0.1
SLC28A1-203ENST00000394573 CHMP4BP1P59074 171 aa14.42□□□□□ -0.1
SLC28A1-203ENST00000394573 NUTM2GQ5VZR2 741 aa14.42□□□□□ -0.1
SLC28A1-203ENST00000394573 BCAS4Q8TDM0 211 aa14.42□□□□□ -0.1
SLC28A1-203ENST00000394573 NBPF3Q9H094 633 aa14.42□□□□□ -0.1
SLC28A1-203ENST00000394573 NPHP3Q7Z494 1330 aa14.42□□□□□ -0.1
SLC28A1-203ENST00000394573 PRG4Q92954 1404 aaPredicted RBP14.42□□□□□ -0.1
SLC28A1-203ENST00000394573 EIF2S2P20042 333 aaKnown RBP14.42□□□□□ -0.1
SLC28A1-203ENST00000394573 ST3GAL1Q11201 340 aa14.42□□□□□ -0.1
SLC28A1-203ENST00000394573 CRYMQ14894 314 aa14.42□□□□□ -0.1
SLC28A1-203ENST00000394573 IGSF22Q8N9C0 903 aa14.42□□□□□ -0.1
SLC28A1-203ENST00000394573 SMARCC1Q92922 1105 aaPredicted RBP14.42□□□□□ -0.1
SLC28A1-203ENST00000394573 TTC14Q96N46 770 aa14.42□□□□□ -0.1
SLC28A1-203ENST00000394573 BIN2Q9UBW5 565 aaPredicted RBP14.42□□□□□ -0.1
SLC28A1-203ENST00000394573 SH3GL3Q99963 347 aa14.41□□□□□ -0.1
SLC28A1-203ENST00000394573 A1CFQ9NQ94 594 aaKnown RBP14.41□□□□□ -0.1
SLC28A1-203ENST00000394573 KNDC1Q76NI1 1749 aa14.41□□□□□ -0.1
SLC28A1-203ENST00000394573 SETD1BQ9UPS6 1966 aaKnown RBP14.41□□□□□ -0.1
SLC28A1-203ENST00000394573 ZNF518AQ6AHZ1 1483 aa14.41□□□□□ -0.1
SLC28A1-203ENST00000394573 TTC21AQ8NDW8 1320 aa14.41□□□□□ -0.1
SLC28A1-203ENST00000394573 HNRNPMP52272 730 aaKnown RBP eCLIP14.41□□□□□ -0.1
SLC28A1-203ENST00000394573 CCDC12Q8WUD4 166 aaPredicted RBP14.41□□□□□ -0.1
SLC28A1-203ENST00000394573 PLEKHF1Q96S99 279 aa14.41□□□□□ -0.1
SLC28A1-203ENST00000394573 C9orf84Q5VXU9 1444 aa14.4□□□□□ -0.1
SLC28A1-203ENST00000394573 YTHDC2Q9H6S0 1430 aaKnown RBP14.4□□□□□ -0.1
SLC28A1-203ENST00000394573 CTAGE5O15320 804 aa14.4□□□□□ -0.1
SLC28A1-203ENST00000394573 PDHBP11177 359 aa14.4□□□□□ -0.1
SLC28A1-203ENST00000394573 HSPA4P34932 840 aa14.4□□□□□ -0.1
SLC28A1-203ENST00000394573 POTEDQ86YR6 584 aa14.4□□□□□ -0.1
SLC28A1-203ENST00000394573 KINO60870 393 aaKnown RBP14.4□□□□□ -0.1
SLC28A1-203ENST00000394573 SPDL1Q96EA4 605 aa14.4□□□□□ -0.1
SLC28A1-203ENST00000394573 DDX20Q9UHI6 824 aaKnown RBP14.4□□□□□ -0.1
SLC28A1-203ENST00000394573 PYGLP06737 847 aa14.39□□□□□ -0.11
SLC28A1-203ENST00000394573 MEIS3Q99687 375 aa14.39□□□□□ -0.11
SLC28A1-203ENST00000394573 DESI2Q9BSY9 194 aa14.39□□□□□ -0.11
SLC28A1-203ENST00000394573 POLD4Q9HCU8 107 aa14.39□□□□□ -0.11
SLC28A1-203ENST00000394573 BIN1O00499 593 aa14.39□□□□□ -0.11
SLC28A1-203ENST00000394573 FNTAP49354 379 aa14.39□□□□□ -0.11
SLC28A1-203ENST00000394573 FOSBP53539 338 aa14.39□□□□□ -0.11
SLC28A1-203ENST00000394573 FTOQ9C0B1 505 aaKnown RBP eCLIP14.39□□□□□ -0.11
SLC28A1-203ENST00000394573 PPP2R2CQ9Y2T4 447 aa14.39□□□□□ -0.11
SLC28A1-203ENST00000394573 ERLIN1O75477 346 aa14.39□□□□□ -0.11
SLC28A1-203ENST00000394573 ZNF202O95125 648 aa14.39□□□□□ -0.11
SLC28A1-203ENST00000394573 SYF2O95926 243 aaKnown RBP14.39□□□□□ -0.11
SLC28A1-203ENST00000394573 LMOD1P29536 600 aaPredicted RBP14.39□□□□□ -0.11
SLC28A1-203ENST00000394573 CDC25CP30307 473 aa14.39□□□□□ -0.11
SLC28A1-203ENST00000394573 DDR1Q08345 913 aa14.39□□□□□ -0.11
SLC28A1-203ENST00000394573 ME3Q16798 604 aa14.39□□□□□ -0.11
SLC28A1-203ENST00000394573 CEP85LQ5SZL2 805 aa14.39□□□□□ -0.11
SLC28A1-203ENST00000394573 CEP57L1Q8IYX8 460 aa14.39□□□□□ -0.11
SLC28A1-203ENST00000394573 TCEANC2Q96MN5 208 aa14.39□□□□□ -0.11
SLC28A1-203ENST00000394573 SCLT1Q96NL6 688 aa14.39□□□□□ -0.11
SLC28A1-203ENST00000394573 TACO1Q9BSH4 297 aaKnown RBP14.39□□□□□ -0.11
SLC28A1-203ENST00000394573 SCAND2PQ9GZW5 306 aaPredicted RBP14.39□□□□□ -0.11
SLC28A1-203ENST00000394573 IMPACTQ9P2X3 320 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms