RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 CKAP2LQ8IYA6 745 aa16.03■□□□□ 0.16
GTF2F1-201ENST00000394456 STOX1Q6ZVD7 989 aa16.03■□□□□ 0.16
GTF2F1-201ENST00000394456 TSC1Q92574 1164 aa16.03■□□□□ 0.16
GTF2F1-201ENST00000394456 SYTL4Q96C24 671 aaPredicted RBP16.03■□□□□ 0.16
GTF2F1-201ENST00000394456 ZNF594Q96JF6 807 aaPredicted RBP16.03■□□□□ 0.16
GTF2F1-201ENST00000394456 ARID3AQ99856 593 aa16.03■□□□□ 0.16
GTF2F1-201ENST00000394456 COPRSQ9NQ92 184 aa16.03■□□□□ 0.16
GTF2F1-201ENST00000394456 SNRKQ9NRH2 765 aa16.03■□□□□ 0.16
GTF2F1-201ENST00000394456 TJP1Q07157 1748 aa16.03■□□□□ 0.16
GTF2F1-201ENST00000394456 TPM2P07951 284 aa16.03■□□□□ 0.16
GTF2F1-201ENST00000394456 TIMM10P62072 90 aa16.03■□□□□ 0.16
GTF2F1-201ENST00000394456 RABL6Q3YEC7 729 aaPredicted RBP16.03■□□□□ 0.16
GTF2F1-201ENST00000394456 CWC25Q9NXE8 425 aaPredicted RBP16.03■□□□□ 0.16
GTF2F1-201ENST00000394456 CYP21A2P08686 494 aa16.02■□□□□ 0.16
GTF2F1-201ENST00000394456 ATG3Q9NT62 314 aa16.02■□□□□ 0.16
GTF2F1-201ENST00000394456 SPC24Q8NBT2 197 aa16.02■□□□□ 0.15
GTF2F1-201ENST00000394456 UQCRHLA0A096LP55 91 aa16.01■□□□□ 0.15
GTF2F1-201ENST00000394456 UQCRHP07919 91 aa16.01■□□□□ 0.15
GTF2F1-201ENST00000394456 ATP5JP18859 108 aa16.01■□□□□ 0.15
GTF2F1-201ENST00000394456 Q6ZUG5 572 aa16.01■□□□□ 0.15
GTF2F1-201ENST00000394456 NEUROD6Q96NK8 337 aa16.01■□□□□ 0.15
GTF2F1-201ENST00000394456 ATP6V1DQ9Y5K8 247 aa16.01■□□□□ 0.15
GTF2F1-201ENST00000394456 H7C1W4 665 aa16.01■□□□□ 0.15
GTF2F1-201ENST00000394456 HIP1O00291 1037 aa16.01■□□□□ 0.15
GTF2F1-201ENST00000394456 PSMA5P28066 241 aa16.01■□□□□ 0.15
GTF2F1-201ENST00000394456 FOXO4P98177 505 aa16.01■□□□□ 0.15
GTF2F1-201ENST00000394456 FTOQ9C0B1 505 aaKnown RBP eCLIP16.01■□□□□ 0.15
GTF2F1-201ENST00000394456 FAM13BQ9NYF5 915 aa16.01■□□□□ 0.15
GTF2F1-201ENST00000394456 DISP2A7MBM2 1401 aa16■□□□□ 0.15
GTF2F1-201ENST00000394456 KDM4AO75164 1064 aa16■□□□□ 0.15
GTF2F1-201ENST00000394456 CEBPZQ03701 1054 aaKnown RBP16■□□□□ 0.15
GTF2F1-201ENST00000394456 LRRC24Q50LG9 513 aa16■□□□□ 0.15
GTF2F1-201ENST00000394456 CHST3Q7LGC8 479 aa16■□□□□ 0.15
GTF2F1-201ENST00000394456 UBE2Q2Q8WVN8 375 aa16■□□□□ 0.15
GTF2F1-201ENST00000394456 AHDC1Q5TGY3 1603 aaPredicted RBP16■□□□□ 0.15
GTF2F1-201ENST00000394456 A0A0G2JS52 829 aa16■□□□□ 0.15
GTF2F1-201ENST00000394456 GOLIM4O00461 696 aa16■□□□□ 0.15
GTF2F1-201ENST00000394456 CCDC85AQ96PX6 553 aaPredicted RBP16■□□□□ 0.15
GTF2F1-201ENST00000394456 FAM177BA6PVY3 158 aa15.99■□□□□ 0.15
GTF2F1-201ENST00000394456 RNF20Q5VTR2 975 aa15.99■□□□□ 0.15
GTF2F1-201ENST00000394456 BRF1Q92994 677 aa15.99■□□□□ 0.15
GTF2F1-201ENST00000394456 DACT1Q9NYF0 836 aa15.99■□□□□ 0.15
GTF2F1-201ENST00000394456 HSP90B1P14625 803 aaKnown RBP15.99■□□□□ 0.15
GTF2F1-201ENST00000394456 LUZP1Q86V48 1076 aa15.99■□□□□ 0.15
GTF2F1-201ENST00000394456 NEK1Q96PY6 1258 aa15.99■□□□□ 0.15
GTF2F1-201ENST00000394456 PUS3Q9BZE2 481 aaKnown RBP15.99■□□□□ 0.15
GTF2F1-201ENST00000394456 JCADQ9P266 1359 aa15.98■□□□□ 0.15
GTF2F1-201ENST00000394456 A0A087WWV3 80 aa15.98■□□□□ 0.15
GTF2F1-201ENST00000394456 EXOC5O00471 708 aa15.98■□□□□ 0.15
GTF2F1-201ENST00000394456 KRT85P78386 507 aa15.98■□□□□ 0.15
GTF2F1-201ENST00000394456 USPL1Q5W0Q7 1092 aa15.98■□□□□ 0.15
GTF2F1-201ENST00000394456 ATG9AQ7Z3C6 839 aa15.98■□□□□ 0.15
GTF2F1-201ENST00000394456 PGBD1Q96JS3 809 aa15.98■□□□□ 0.15
GTF2F1-201ENST00000394456 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.98■□□□□ 0.15
GTF2F1-201ENST00000394456 COL22A1Q8NFW1 1626 aaPredicted RBP15.98■□□□□ 0.15
GTF2F1-201ENST00000394456 RRP9O43818 475 aaKnown RBP15.98■□□□□ 0.15
GTF2F1-201ENST00000394456 CCDC191Q8NCU4 936 aa15.98■□□□□ 0.15
GTF2F1-201ENST00000394456 SLC4A9Q96Q91 983 aa15.98■□□□□ 0.15
GTF2F1-201ENST00000394456 NUTM2BA6NNL0 878 aaPredicted RBP15.97■□□□□ 0.15
GTF2F1-201ENST00000394456 NUTM2EB1AL46 878 aaPredicted RBP15.97■□□□□ 0.15
GTF2F1-201ENST00000394456 KIAA2012Q0VF49 1180 aa15.97■□□□□ 0.15
GTF2F1-201ENST00000394456 UVSSAQ2YD98 709 aa15.97■□□□□ 0.15
GTF2F1-201ENST00000394456 NUTM2AQ8IVF1 878 aaPredicted RBP15.97■□□□□ 0.15
GTF2F1-201ENST00000394456 FAM184AQ8NB25 1140 aa15.97■□□□□ 0.15
GTF2F1-201ENST00000394456 LEO1Q8WVC0 666 aaPredicted RBP15.97■□□□□ 0.15
GTF2F1-201ENST00000394456 KCNF1Q9H3M0 494 aa15.97■□□□□ 0.15
GTF2F1-201ENST00000394456 NCOA5Q9HCD5 579 aaKnown RBP15.97■□□□□ 0.15
GTF2F1-201ENST00000394456 PLCH1Q4KWH8 1693 aa15.97■□□□□ 0.15
GTF2F1-201ENST00000394456 NR1I2O75469 434 aa15.97■□□□□ 0.15
GTF2F1-201ENST00000394456 SCRN1Q12765 414 aa15.97■□□□□ 0.15
GTF2F1-201ENST00000394456 HSP90AB3PQ58FF7 597 aa15.97■□□□□ 0.15
GTF2F1-201ENST00000394456 HAUS7Q99871 368 aa15.97■□□□□ 0.15
GTF2F1-201ENST00000394456 GPHNQ9NQX3 736 aaPredicted RBP15.97■□□□□ 0.15
GTF2F1-201ENST00000394456 PYCARDQ9ULZ3 195 aa15.97■□□□□ 0.15
GTF2F1-201ENST00000394456 MRVI1Q9Y6F6 885 aa15.97■□□□□ 0.15
GTF2F1-201ENST00000394456 MCM5P33992 734 aa15.96■□□□□ 0.15
GTF2F1-201ENST00000394456 CCT2P78371 535 aaKnown RBP15.96■□□□□ 0.15
GTF2F1-201ENST00000394456 APOBRQ0VD83 1088 aa15.96■□□□□ 0.15
GTF2F1-201ENST00000394456 TTLL5Q6EMB2 1281 aa15.96■□□□□ 0.15
GTF2F1-201ENST00000394456 GTF3C6Q969F1 213 aa15.96■□□□□ 0.15
GTF2F1-201ENST00000394456 SPATA32Q96LK8 384 aa15.96■□□□□ 0.15
GTF2F1-201ENST00000394456 PHLPP1O60346 1717 aa15.96■□□□□ 0.15
GTF2F1-201ENST00000394456 BCL9O00512 1426 aa15.96■□□□□ 0.15
GTF2F1-201ENST00000394456 WNK3Q9BYP7 1800 aa15.96■□□□□ 0.15
GTF2F1-201ENST00000394456 STARD3NLO95772 234 aa15.96■□□□□ 0.14
GTF2F1-201ENST00000394456 PIP4K2BP78356 416 aa15.96■□□□□ 0.14
GTF2F1-201ENST00000394456 GUCY1B3Q02153 619 aa15.96■□□□□ 0.14
GTF2F1-201ENST00000394456 MCMDC2Q4G0Z9 681 aa15.96■□□□□ 0.14
GTF2F1-201ENST00000394456 DNTTIP2Q5QJE6 756 aaKnown RBP15.96■□□□□ 0.14
GTF2F1-201ENST00000394456 NUP62CLQ9H1M0 184 aa15.96■□□□□ 0.14
GTF2F1-201ENST00000394456 NAP1L2Q9ULW6 460 aaPredicted RBP15.96■□□□□ 0.14
GTF2F1-201ENST00000394456 LTBP4Q8N2S1 1624 aa15.95■□□□□ 0.14
GTF2F1-201ENST00000394456 TYRO3Q06418 890 aa15.95■□□□□ 0.14
GTF2F1-201ENST00000394456 TCIRG1Q13488 830 aa15.95■□□□□ 0.14
GTF2F1-201ENST00000394456 KIF6Q6ZMV9 814 aa15.95■□□□□ 0.14
GTF2F1-201ENST00000394456 DOT1LQ8TEK3 1739 aa15.95■□□□□ 0.14
GTF2F1-201ENST00000394456 LETM1O95202 739 aaPredicted RBP15.95■□□□□ 0.14
GTF2F1-201ENST00000394456 CTDNEP1O95476 244 aa15.95■□□□□ 0.14
GTF2F1-201ENST00000394456 GPTP24298 496 aa15.95■□□□□ 0.14
GTF2F1-201ENST00000394456 RESTQ13127 1097 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms