RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 GJB2P29033 226 aa22.05■■□□□ 1.12
HOXC6-202ENST00000394331 GSDMDP57764 484 aa22.05■■□□□ 1.12
HOXC6-202ENST00000394331 FBXO18Q8NFZ0 1043 aa22.05■■□□□ 1.12
HOXC6-202ENST00000394331 SNX14Q9Y5W7 946 aa22.05■■□□□ 1.12
HOXC6-202ENST00000394331 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.04■■□□□ 1.12
HOXC6-202ENST00000394331 CCDC69A6NI79 296 aa22.04■■□□□ 1.12
HOXC6-202ENST00000394331 PSEN1P49768 467 aa22.04■■□□□ 1.12
HOXC6-202ENST00000394331 LMOD2Q6P5Q4 547 aa22.04■■□□□ 1.12
HOXC6-202ENST00000394331 GPATCH3Q96I76 525 aa22.04■■□□□ 1.12
HOXC6-202ENST00000394331 SCAND2PQ9GZW5 306 aaPredicted RBP22.04■■□□□ 1.12
HOXC6-202ENST00000394331 PXDNQ92626 1479 aa22.04■■□□□ 1.12
HOXC6-202ENST00000394331 NPHP4O75161 1426 aaPredicted RBP22.04■■□□□ 1.12
HOXC6-202ENST00000394331 CCDC191Q8NCU4 936 aa22.03■■□□□ 1.12
HOXC6-202ENST00000394331 RUFY2Q8WXA3 655 aa22.03■■□□□ 1.12
HOXC6-202ENST00000394331 SMARCE1Q969G3 411 aa22.03■■□□□ 1.12
HOXC6-202ENST00000394331 SETD1BQ9UPS6 1966 aaKnown RBP22.03■■□□□ 1.12
HOXC6-202ENST00000394331 PSDA5PKW4 1024 aaPredicted RBP22.03■■□□□ 1.12
HOXC6-202ENST00000394331 DDX58O95786 925 aaKnown RBP22.03■■□□□ 1.12
HOXC6-202ENST00000394331 GUCY2CP25092 1073 aa22.03■■□□□ 1.12
HOXC6-202ENST00000394331 DHX8Q14562 1220 aaKnown RBP22.03■■□□□ 1.12
HOXC6-202ENST00000394331 TPRNQ4KMQ1 711 aa22.03■■□□□ 1.12
HOXC6-202ENST00000394331 ARHGAP29Q52LW3 1261 aa22.03■■□□□ 1.12
HOXC6-202ENST00000394331 AXDND1Q5T1B0 1012 aaPredicted RBP22.03■■□□□ 1.12
HOXC6-202ENST00000394331 NCAPGQ9BPX3 1015 aa22.03■■□□□ 1.12
HOXC6-202ENST00000394331 LSG1Q9H089 658 aaKnown RBP22.03■■□□□ 1.12
HOXC6-202ENST00000394331 DACT1Q9NYF0 836 aa22.03■■□□□ 1.12
HOXC6-202ENST00000394331 SNW1Q13573 536 aaKnown RBP22.03■■□□□ 1.12
HOXC6-202ENST00000394331 IQCB1Q15051 598 aa22.03■■□□□ 1.12
HOXC6-202ENST00000394331 MYCBPQ99417 103 aaPredicted RBP22.03■■□□□ 1.12
HOXC6-202ENST00000394331 SRRTQ9BXP5 876 aaKnown RBP22.03■■□□□ 1.12
HOXC6-202ENST00000394331 CAMK4Q16566 473 aa22.02■■□□□ 1.12
HOXC6-202ENST00000394331 EXOC4Q96A65 974 aa22.02■■□□□ 1.12
HOXC6-202ENST00000394331 AK7Q96M32 723 aa22.02■■□□□ 1.12
HOXC6-202ENST00000394331 ECHDC1Q9NTX5 307 aa22.02■■□□□ 1.12
HOXC6-202ENST00000394331 ORC3Q9UBD5 711 aaPredicted RBP22.02■■□□□ 1.12
HOXC6-202ENST00000394331 RGPD2P0DJD1 1756 aa22.02■■□□□ 1.12
HOXC6-202ENST00000394331 CKAP2LQ8IYA6 745 aa22.02■■□□□ 1.12
HOXC6-202ENST00000394331 LINS1Q8NG48 757 aa22.02■■□□□ 1.12
HOXC6-202ENST00000394331 PLEKHG2Q9H7P9 1386 aa22.02■■□□□ 1.12
HOXC6-202ENST00000394331 LMTK3Q96Q04 1460 aa22.01■■□□□ 1.11
HOXC6-202ENST00000394331 PROSER3Q2NL68 480 aa22.01■■□□□ 1.11
HOXC6-202ENST00000394331 NOM1Q5C9Z4 860 aaKnown RBP22.01■■□□□ 1.11
HOXC6-202ENST00000394331 RNF216Q9NWF9 866 aaPredicted RBP22.01■■□□□ 1.11
HOXC6-202ENST00000394331 GOLGA6L19H0YKK7 550 aa22■■□□□ 1.11
HOXC6-202ENST00000394331 C10orf67Q8IYJ2 551 aa22■■□□□ 1.11
HOXC6-202ENST00000394331 IMPACTQ9P2X3 320 aa22■■□□□ 1.11
HOXC6-202ENST00000394331 IFIT2P09913 472 aaKnown RBP22■■□□□ 1.11
HOXC6-202ENST00000394331 CWC27Q6UX04 472 aaKnown RBP22■■□□□ 1.11
HOXC6-202ENST00000394331 KRT28Q7Z3Y7 464 aa22■■□□□ 1.11
HOXC6-202ENST00000394331 OSBPL5Q9H0X9 879 aaPredicted RBP22■■□□□ 1.11
HOXC6-202ENST00000394331 DNAJC25Q9H1X3 360 aa22■■□□□ 1.11
HOXC6-202ENST00000394331 DDX21Q9NR30 783 aaKnown RBP eCLIP22■■□□□ 1.11
HOXC6-202ENST00000394331 A0A1B0GUL7 405 aa21.99■■□□□ 1.11
HOXC6-202ENST00000394331 ST5P78524 1137 aa21.99■■□□□ 1.11
HOXC6-202ENST00000394331 VPS53Q5VIR6 699 aa21.99■■□□□ 1.11
HOXC6-202ENST00000394331 RRP15Q9Y3B9 282 aaKnown RBP21.99■■□□□ 1.11
HOXC6-202ENST00000394331 PHLPP2Q6ZVD8 1323 aa21.99■■□□□ 1.11
HOXC6-202ENST00000394331 GRM8O00222 908 aa21.99■■□□□ 1.11
HOXC6-202ENST00000394331 CLGNO14967 610 aa21.99■■□□□ 1.11
HOXC6-202ENST00000394331 CCDC158Q5M9N0 1113 aa21.99■■□□□ 1.11
HOXC6-202ENST00000394331 UTYO14607 1347 aa21.98■■□□□ 1.11
HOXC6-202ENST00000394331 CRYBG1Q9Y4K1 1723 aa21.98■■□□□ 1.11
HOXC6-202ENST00000394331 TRIM66O15016 1216 aa21.98■■□□□ 1.11
HOXC6-202ENST00000394331 AXIN2Q9Y2T1 843 aa21.98■■□□□ 1.11
HOXC6-202ENST00000394331 ARID5BQ14865 1188 aa21.98■■□□□ 1.11
HOXC6-202ENST00000394331 CWF19L2Q2TBE0 894 aaKnown RBP21.98■■□□□ 1.11
HOXC6-202ENST00000394331 LCMT1Q9UIC8 334 aa21.98■■□□□ 1.11
HOXC6-202ENST00000394331 POLR3GO15318 223 aaPredicted RBP21.97■■□□□ 1.11
HOXC6-202ENST00000394331 PDCP20941 246 aa21.97■■□□□ 1.11
HOXC6-202ENST00000394331 UBXN4Q92575 508 aa21.97■■□□□ 1.11
HOXC6-202ENST00000394331 IVLP07476 585 aa21.97■■□□□ 1.11
HOXC6-202ENST00000394331 CASTP20810 708 aaKnown RBP21.97■■□□□ 1.11
HOXC6-202ENST00000394331 OAS2P29728 719 aaKnown RBP21.97■■□□□ 1.11
HOXC6-202ENST00000394331 TM6SF1Q9BZW5 370 aa21.97■■□□□ 1.11
HOXC6-202ENST00000394331 TRMT1Q9NXH9 659 aaKnown RBP21.97■■□□□ 1.11
HOXC6-202ENST00000394331 CAMTA1Q9Y6Y1 1673 aa21.97■■□□□ 1.11
HOXC6-202ENST00000394331 EVI5LQ96CN4 794 aa21.96■■□□□ 1.11
HOXC6-202ENST00000394331 PPP1R13BQ96KQ4 1090 aa21.96■■□□□ 1.11
HOXC6-202ENST00000394331 GOLGA6L4A6NEF3 574 aa21.96■■□□□ 1.11
HOXC6-202ENST00000394331 PRAMEF22A3QJZ6 481 aa21.96■■□□□ 1.11
HOXC6-202ENST00000394331 VPS37CA5D8V6 355 aaPredicted RBP21.96■■□□□ 1.11
HOXC6-202ENST00000394331 EFCAB8A8MWE9 144 aa21.96■■□□□ 1.11
HOXC6-202ENST00000394331 CCDC83Q8IWF9 413 aa21.96■■□□□ 1.11
HOXC6-202ENST00000394331 REXO1L1PQ8IX06 675 aa21.96■■□□□ 1.11
HOXC6-202ENST00000394331 RASEFQ8IZ41 740 aa21.96■■□□□ 1.11
HOXC6-202ENST00000394331 SPG7Q9UQ90 795 aa21.96■■□□□ 1.11
HOXC6-202ENST00000394331 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.95■■□□□ 1.1
HOXC6-202ENST00000394331 LARGE1O95461 756 aa21.95■■□□□ 1.1
HOXC6-202ENST00000394331 E4F1Q66K89 784 aaPredicted RBP21.95■■□□□ 1.1
HOXC6-202ENST00000394331 PA2G4Q9UQ80 394 aaKnown RBP21.95■■□□□ 1.1
HOXC6-202ENST00000394331 CCP110O43303 1012 aa21.95■■□□□ 1.1
HOXC6-202ENST00000394331 RPS6KA5O75582 802 aa21.95■■□□□ 1.1
HOXC6-202ENST00000394331 TBC1D8O95759 1140 aa21.95■■□□□ 1.1
HOXC6-202ENST00000394331 MAGEA9P43362 315 aa21.95■■□□□ 1.1
HOXC6-202ENST00000394331 G3BP1Q13283 466 aaKnown RBP eCLIP21.95■■□□□ 1.1
HOXC6-202ENST00000394331 CCDC150Q8NCX0 1101 aa21.95■■□□□ 1.1
HOXC6-202ENST00000394331 RAPGEF4Q8WZA2 1011 aa21.95■■□□□ 1.1
HOXC6-202ENST00000394331 CTAGE5O15320 804 aa21.94■■□□□ 1.1
HOXC6-202ENST00000394331 SMC1AQ14683 1233 aaKnown RBP21.94■■□□□ 1.1
HOXC6-202ENST00000394331 AACSQ86V21 672 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms