RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 CREB3L3Q68CJ9 461 aa10.57□□□□□ -0.72
CDH11-202ENST00000394156 KIAA1328Q86T90 577 aa10.57□□□□□ -0.72
CDH11-202ENST00000394156 PAF1Q8N7H5 531 aa10.57□□□□□ -0.72
CDH11-202ENST00000394156 ZNF408Q9H9D4 720 aa10.57□□□□□ -0.72
CDH11-202ENST00000394156 ZFYVE16Q7Z3T8 1539 aa10.57□□□□□ -0.72
CDH11-202ENST00000394156 CCNL1Q9UK58 526 aaPredicted RBP10.57□□□□□ -0.72
CDH11-202ENST00000394156 IDEP14735 1019 aa10.57□□□□□ -0.72
CDH11-202ENST00000394156 HDAC1Q13547 482 aaPredicted RBP10.57□□□□□ -0.72
CDH11-202ENST00000394156 RAB3GAP1Q15042 981 aa10.56□□□□□ -0.72
CDH11-202ENST00000394156 TMC6Q7Z403 805 aa10.56□□□□□ -0.72
CDH11-202ENST00000394156 MCM7P33993 719 aa10.56□□□□□ -0.72
CDH11-202ENST00000394156 ZNF496Q96IT1 587 aaPredicted RBP10.56□□□□□ -0.72
CDH11-202ENST00000394156 PRC1O43663 620 aa10.56□□□□□ -0.72
CDH11-202ENST00000394156 CLIP2Q9UDT6 1046 aa10.56□□□□□ -0.72
CDH11-202ENST00000394156 SOS1Q07889 1333 aaPredicted RBP10.56□□□□□ -0.72
CDH11-202ENST00000394156 ADCY5O95622 1261 aa10.56□□□□□ -0.72
CDH11-202ENST00000394156 STIM1Q13586 685 aa10.56□□□□□ -0.72
CDH11-202ENST00000394156 CCDC183Q5T5S1 534 aa10.56□□□□□ -0.72
CDH11-202ENST00000394156 IL17REQ8NFR9 667 aa10.56□□□□□ -0.72
CDH11-202ENST00000394156 ZMYM4Q5VZL5 1548 aa10.56□□□□□ -0.72
CDH11-202ENST00000394156 POLR3AO14802 1390 aaPredicted RBP10.56□□□□□ -0.72
CDH11-202ENST00000394156 SLFNL1Q499Z3 407 aa10.56□□□□□ -0.72
CDH11-202ENST00000394156 SLAIN2Q9P270 581 aa10.56□□□□□ -0.72
CDH11-202ENST00000394156 USP21Q9UK80 565 aa10.56□□□□□ -0.72
CDH11-202ENST00000394156 ERICH4A6NGS2 130 aa10.55□□□□□ -0.72
CDH11-202ENST00000394156 MBD4O95243 580 aa10.55□□□□□ -0.72
CDH11-202ENST00000394156 CALM1P0DP23 149 aa10.55□□□□□ -0.72
CDH11-202ENST00000394156 CALM2P0DP24 149 aa10.55□□□□□ -0.72
CDH11-202ENST00000394156 CALM3P0DP25 149 aa10.55□□□□□ -0.72
CDH11-202ENST00000394156 SLC52A2Q9HAB3 445 aa10.55□□□□□ -0.72
CDH11-202ENST00000394156 GPCPD1Q9NPB8 672 aa10.55□□□□□ -0.72
CDH11-202ENST00000394156 RNF216Q9NWF9 866 aaPredicted RBP10.55□□□□□ -0.72
CDH11-202ENST00000394156 CCDC194A0A1B0GVG4 234 aa10.55□□□□□ -0.72
CDH11-202ENST00000394156 USP8P40818 1118 aa10.55□□□□□ -0.72
CDH11-202ENST00000394156 ASAP1Q9ULH1 1129 aa10.55□□□□□ -0.72
CDH11-202ENST00000394156 PCDH11XQ9BZA7 1347 aa10.55□□□□□ -0.72
CDH11-202ENST00000394156 PCDH11YQ9BZA8 1340 aa10.55□□□□□ -0.72
CDH11-202ENST00000394156 STX17P56962 302 aa10.55□□□□□ -0.72
CDH11-202ENST00000394156 ANO6Q4KMQ2 910 aa10.55□□□□□ -0.72
CDH11-202ENST00000394156 KDM5CP41229 1560 aa10.55□□□□□ -0.72
CDH11-202ENST00000394156 IL16Q14005 1332 aa10.55□□□□□ -0.72
CDH11-202ENST00000394156 MCM5P33992 734 aa10.54□□□□□ -0.72
CDH11-202ENST00000394156 GPR101Q96P66 508 aaPredicted RBP10.54□□□□□ -0.72
CDH11-202ENST00000394156 PHKBQ93100 1093 aa10.54□□□□□ -0.72
CDH11-202ENST00000394156 XAGE2Q96GT9 111 aa10.54□□□□□ -0.72
CDH11-202ENST00000394156 NUP88Q99567 741 aaPredicted RBP10.54□□□□□ -0.72
CDH11-202ENST00000394156 BCORL1Q5H9F3 1711 aa10.54□□□□□ -0.72
CDH11-202ENST00000394156 ZBTB43O43298 467 aa10.54□□□□□ -0.72
CDH11-202ENST00000394156 CHMLP26374 656 aa10.54□□□□□ -0.72
CDH11-202ENST00000394156 TRAPPC3LQ5T215 181 aa10.54□□□□□ -0.72
CDH11-202ENST00000394156 CCDC181Q5TID7 509 aa10.54□□□□□ -0.72
CDH11-202ENST00000394156 DCAF5Q96JK2 942 aa10.54□□□□□ -0.72
CDH11-202ENST00000394156 ZNHIT6Q9NWK9 470 aaKnown RBP10.54□□□□□ -0.72
CDH11-202ENST00000394156 ARID5AQ03989 594 aa10.54□□□□□ -0.72
CDH11-202ENST00000394156 TCERG1LQ5VWI1 586 aa10.54□□□□□ -0.72
CDH11-202ENST00000394156 MAEAQ7L5Y9 396 aa10.54□□□□□ -0.72
CDH11-202ENST00000394156 CRNKL1Q9BZJ0 848 aaKnown RBP10.54□□□□□ -0.72
CDH11-202ENST00000394156 MAPK8IP1Q9UQF2 711 aa10.54□□□□□ -0.72
CDH11-202ENST00000394156 UFL1O94874 794 aa10.54□□□□□ -0.72
CDH11-202ENST00000394156 PTGS1P23219 599 aa10.54□□□□□ -0.72
CDH11-202ENST00000394156 CCDC178Q5BJE1 867 aa10.54□□□□□ -0.72
CDH11-202ENST00000394156 AXDND1Q5T1B0 1012 aaPredicted RBP10.54□□□□□ -0.72
CDH11-202ENST00000394156 WWC2Q6AWC2 1192 aa10.53□□□□□ -0.72
CDH11-202ENST00000394156 PARP3Q9Y6F1 533 aa10.53□□□□□ -0.72
CDH11-202ENST00000394156 PDE4BQ07343 736 aa10.53□□□□□ -0.72
CDH11-202ENST00000394156 TTF1Q15361 905 aaPredicted RBP10.53□□□□□ -0.72
CDH11-202ENST00000394156 DHX58Q96C10 678 aa10.53□□□□□ -0.72
CDH11-202ENST00000394156 SHANK2Q9UPX8 1470 aa10.53□□□□□ -0.72
CDH11-202ENST00000394156 RTN1Q16799 776 aa10.53□□□□□ -0.72
CDH11-202ENST00000394156 DOK7Q18PE1 504 aa10.53□□□□□ -0.72
CDH11-202ENST00000394156 FAM47AQ5JRC9 791 aa10.53□□□□□ -0.72
CDH11-202ENST00000394156 DNAJC25Q9H1X3 360 aa10.53□□□□□ -0.72
CDH11-202ENST00000394156 PTPRTO14522 1441 aa10.53□□□□□ -0.72
CDH11-202ENST00000394156 ZSCAN22P10073 491 aaPredicted RBP10.53□□□□□ -0.72
CDH11-202ENST00000394156 LRRC24Q50LG9 513 aa10.53□□□□□ -0.72
CDH11-202ENST00000394156 WASF1Q92558 559 aa10.53□□□□□ -0.72
CDH11-202ENST00000394156 DRC1Q96MC2 740 aa10.53□□□□□ -0.72
CDH11-202ENST00000394156 DPH6Q7L8W6 267 aa10.53□□□□□ -0.72
CDH11-202ENST00000394156 PREX2Q70Z35 1606 aa10.52□□□□□ -0.72
CDH11-202ENST00000394156 APBA3O96018 575 aa10.52□□□□□ -0.72
CDH11-202ENST00000394156 ZAP70P43403 619 aa10.52□□□□□ -0.72
CDH11-202ENST00000394156 SPDYE4A6NLX3 237 aa10.52□□□□□ -0.72
CDH11-202ENST00000394156 TLR7Q9NYK1 1049 aaKnown RBP10.52□□□□□ -0.72
CDH11-202ENST00000394156 EDC4Q6P2E9 1401 aaKnown RBP10.52□□□□□ -0.73
CDH11-202ENST00000394156 BAG3O95817 575 aa10.52□□□□□ -0.73
CDH11-202ENST00000394156 TEX13AQ9BXU3 409 aaPredicted RBP10.52□□□□□ -0.73
CDH11-202ENST00000394156 DCTPP1Q9H773 170 aa10.52□□□□□ -0.73
CDH11-202ENST00000394156 TNNI3KQ59H18 835 aa10.52□□□□□ -0.73
CDH11-202ENST00000394156 FAM212AQ96EL1 285 aa10.52□□□□□ -0.73
CDH11-202ENST00000394156 CEP131Q9UPN4 1083 aa10.52□□□□□ -0.73
CDH11-202ENST00000394156 FPGT-TNNI3KV9GXZ4 949 aa10.52□□□□□ -0.73
CDH11-202ENST00000394156 USP26Q9BXU7 913 aa10.52□□□□□ -0.73
CDH11-202ENST00000394156 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.52□□□□□ -0.73
CDH11-202ENST00000394156 V9GYY5 206 aaPredicted RBP10.52□□□□□ -0.73
CDH11-202ENST00000394156 TRIM37O94972 964 aa10.52□□□□□ -0.73
CDH11-202ENST00000394156 PUF60Q9UHX1 559 aaKnown RBP10.52□□□□□ -0.73
CDH11-202ENST00000394156 MACROD2A1Z1Q3 448 aa10.51□□□□□ -0.73
CDH11-202ENST00000394156 CBX1P83916 185 aa10.51□□□□□ -0.73
CDH11-202ENST00000394156 ZNF174Q15697 407 aa10.51□□□□□ -0.73
CDH11-202ENST00000394156 COBLO75128 1261 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms