RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 CEP85Q6P2H3 762 aa7.27□□□□□ -1.25
CASC3-202ENST00000394114 ZNF662Q6ZS27 426 aa7.27□□□□□ -1.25
CASC3-202ENST00000394114 FMNL2Q96PY5 1086 aa7.27□□□□□ -1.25
CASC3-202ENST00000394114 MAP3K2Q9Y2U5 619 aa7.27□□□□□ -1.25
CASC3-202ENST00000394114 ATP10DQ9P241 1426 aa7.27□□□□□ -1.25
CASC3-202ENST00000394114 MRC1P22897 1456 aa7.27□□□□□ -1.25
CASC3-202ENST00000394114 TOGARAM1Q9Y4F4 1720 aa7.27□□□□□ -1.25
CASC3-202ENST00000394114 USP17L3A6NCW0 530 aa7.27□□□□□ -1.25
CASC3-202ENST00000394114 USP17L4A6NCW7 530 aa7.27□□□□□ -1.25
CASC3-202ENST00000394114 TSNAXIP1Q2TAA8 658 aa7.27□□□□□ -1.25
CASC3-202ENST00000394114 USP17L2Q6R6M4 530 aa7.27□□□□□ -1.25
CASC3-202ENST00000394114 USP17L1Q7RTZ2 530 aa7.27□□□□□ -1.25
CASC3-202ENST00000394114 HELBQ8NG08 1087 aaPredicted RBP7.27□□□□□ -1.25
CASC3-202ENST00000394114 DNAAF4Q8WXU2 420 aa7.27□□□□□ -1.25
CASC3-202ENST00000394114 ADCY9O60503 1353 aa7.27□□□□□ -1.25
CASC3-202ENST00000394114 DDX11L8A8MPP1 907 aa7.26□□□□□ -1.25
CASC3-202ENST00000394114 USP17L15C9J2P7 530 aa7.26□□□□□ -1.25
CASC3-202ENST00000394114 USP17L10C9JJH3 530 aa7.26□□□□□ -1.25
CASC3-202ENST00000394114 USP17L13C9JLJ4 530 aa7.26□□□□□ -1.25
CASC3-202ENST00000394114 USP17L12C9JPN9 530 aa7.26□□□□□ -1.25
CASC3-202ENST00000394114 USP17L11C9JVI0 530 aa7.26□□□□□ -1.25
CASC3-202ENST00000394114 USP17L21D6R901 530 aa7.26□□□□□ -1.25
CASC3-202ENST00000394114 USP17L18D6R9N7 530 aa7.26□□□□□ -1.25
CASC3-202ENST00000394114 USP17L22D6RA61 530 aa7.26□□□□□ -1.25
CASC3-202ENST00000394114 USP17L17D6RBQ6 530 aa7.26□□□□□ -1.25
CASC3-202ENST00000394114 USP17L19D6RCP7 530 aa7.26□□□□□ -1.25
CASC3-202ENST00000394114 USP17L20D6RJB6 530 aa7.26□□□□□ -1.25
CASC3-202ENST00000394114 SNRPA1P09661 255 aaKnown RBP7.26□□□□□ -1.25
CASC3-202ENST00000394114 USP17L24Q0WX57 530 aa7.26□□□□□ -1.25
CASC3-202ENST00000394114 C8orf34Q49A92 452 aa7.26□□□□□ -1.25
CASC3-202ENST00000394114 CRTC2Q53ET0 693 aaPredicted RBP7.26□□□□□ -1.25
CASC3-202ENST00000394114 PLEKHM2Q8IWE5 1019 aa7.26□□□□□ -1.25
CASC3-202ENST00000394114 SRCIN1Q9C0H9 1055 aa7.26□□□□□ -1.25
CASC3-202ENST00000394114 USP44Q9H0E7 712 aa7.26□□□□□ -1.25
CASC3-202ENST00000394114 BMP2KQ9NSY1 1161 aaPredicted RBP7.26□□□□□ -1.25
CASC3-202ENST00000394114 TMOD3Q9NYL9 352 aa7.26□□□□□ -1.25
CASC3-202ENST00000394114 LRRFIP2Q9Y608 721 aaKnown RBP7.26□□□□□ -1.25
CASC3-202ENST00000394114 ERVV-2B6SEH9 535 aa7.26□□□□□ -1.25
CASC3-202ENST00000394114 PIK3CDO00329 1044 aa7.26□□□□□ -1.25
CASC3-202ENST00000394114 GNAI2P04899 355 aa7.26□□□□□ -1.25
CASC3-202ENST00000394114 ATP2B4P23634 1241 aa7.26□□□□□ -1.25
CASC3-202ENST00000394114 CWF19L2Q2TBE0 894 aaKnown RBP7.26□□□□□ -1.25
CASC3-202ENST00000394114 NOP9Q86U38 636 aaKnown RBP7.26□□□□□ -1.25
CASC3-202ENST00000394114 ANKRD44Q8N8A2 993 aa7.26□□□□□ -1.25
CASC3-202ENST00000394114 NGLY1Q96IV0 654 aa7.26□□□□□ -1.25
CASC3-202ENST00000394114 DDX21Q9NR30 783 aaKnown RBP eCLIP7.26□□□□□ -1.25
CASC3-202ENST00000394114 EXOC5O00471 708 aa7.25□□□□□ -1.25
CASC3-202ENST00000394114 NBPF7P0C2Y1 421 aaPredicted RBP7.25□□□□□ -1.25
CASC3-202ENST00000394114 NUCB1Q02818 461 aa7.25□□□□□ -1.25
CASC3-202ENST00000394114 C6orf132Q5T0Z8 1188 aa7.25□□□□□ -1.25
CASC3-202ENST00000394114 COPS6Q7L5N1 327 aa7.25□□□□□ -1.25
CASC3-202ENST00000394114 CHD1LQ86WJ1 897 aa7.25□□□□□ -1.25
CASC3-202ENST00000394114 XAGE3Q8WTP9 111 aa7.25□□□□□ -1.25
CASC3-202ENST00000394114 HYPKQ9NX55 129 aa7.25□□□□□ -1.25
CASC3-202ENST00000394114 ASAP1Q9ULH1 1129 aa7.25□□□□□ -1.25
CASC3-202ENST00000394114 DISP2A7MBM2 1401 aa7.25□□□□□ -1.25
CASC3-202ENST00000394114 PLEKHG2Q9H7P9 1386 aa7.25□□□□□ -1.25
CASC3-202ENST00000394114 ITGB4P16144 1822 aa7.25□□□□□ -1.25
CASC3-202ENST00000394114 SPATA31A1Q5TZJ5 1347 aa7.25□□□□□ -1.25
CASC3-202ENST00000394114 G3V3G9 751 aa7.25□□□□□ -1.25
CASC3-202ENST00000394114 UBTFL1P0CB47 393 aaPredicted RBP7.25□□□□□ -1.25
CASC3-202ENST00000394114 BEND3Q5T5X7 828 aa7.25□□□□□ -1.25
CASC3-202ENST00000394114 PIGBQ92521 554 aa7.25□□□□□ -1.25
CASC3-202ENST00000394114 NRAPQ86VF7 1730 aa7.25□□□□□ -1.25
CASC3-202ENST00000394114 PNMA6EA0A0J9YXQ4 647 aa7.25□□□□□ -1.25
CASC3-202ENST00000394114 SLC34A2O95436 690 aa7.25□□□□□ -1.25
CASC3-202ENST00000394114 GNAI3P08754 354 aa7.25□□□□□ -1.25
CASC3-202ENST00000394114 KSR2Q6VAB6 950 aa7.25□□□□□ -1.25
CASC3-202ENST00000394114 RPAP2Q8IXW5 612 aaPredicted RBP7.25□□□□□ -1.25
CASC3-202ENST00000394114 PNMA1Q8ND90 353 aa7.25□□□□□ -1.25
CASC3-202ENST00000394114 C1orf216Q8TAB5 229 aa7.25□□□□□ -1.25
CASC3-202ENST00000394114 GCC1Q96CN9 775 aa7.25□□□□□ -1.25
CASC3-202ENST00000394114 ACSBG1Q96GR2 724 aa7.25□□□□□ -1.25
CASC3-202ENST00000394114 EXOC6BQ9Y2D4 811 aa7.25□□□□□ -1.25
CASC3-202ENST00000394114 A1BGP04217 495 aa7.24□□□□□ -1.25
CASC3-202ENST00000394114 PRSS12P56730 875 aa7.24□□□□□ -1.25
CASC3-202ENST00000394114 PTK7Q13308 1070 aa7.24□□□□□ -1.25
CASC3-202ENST00000394114 DDB1Q16531 1140 aa7.24□□□□□ -1.25
CASC3-202ENST00000394114 FAM182BQ5T319 152 aa7.24□□□□□ -1.25
CASC3-202ENST00000394114 C16orf71Q8IYS4 520 aaPredicted RBP7.24□□□□□ -1.25
CASC3-202ENST00000394114 NAP1L5Q96NT1 182 aaPredicted RBP7.24□□□□□ -1.25
CASC3-202ENST00000394114 DCTPP1Q9H773 170 aa7.24□□□□□ -1.25
CASC3-202ENST00000394114 PCDHGC3Q9UN70 934 aa7.24□□□□□ -1.25
CASC3-202ENST00000394114 UTRNP46939 3433 aa7.24□□□□□ -1.25
CASC3-202ENST00000394114 GLI3P10071 1580 aa7.24□□□□□ -1.25
CASC3-202ENST00000394114 N4BP2Q86UW6 1770 aaPredicted RBP7.24□□□□□ -1.25
CASC3-202ENST00000394114 NBPF26B4DH59 902 aa7.24□□□□□ -1.25
CASC3-202ENST00000394114 SEC24BO95487 1268 aa7.24□□□□□ -1.25
CASC3-202ENST00000394114 FDX1P10109 184 aa7.24□□□□□ -1.25
CASC3-202ENST00000394114 CD44P16070 742 aaKnown RBP7.24□□□□□ -1.25
CASC3-202ENST00000394114 SCNN1AP37088 669 aa7.24□□□□□ -1.25
CASC3-202ENST00000394114 FAM98CQ17RN3 349 aaKnown RBP7.24□□□□□ -1.25
CASC3-202ENST00000394114 NBPF14Q5TI25 921 aa7.24□□□□□ -1.25
CASC3-202ENST00000394114 NBPF10Q6P3W6 841 aaKnown RBP7.24□□□□□ -1.25
CASC3-202ENST00000394114 POTEHQ6S545 545 aa7.24□□□□□ -1.25
CASC3-202ENST00000394114 PIP4P2Q8N4L2 257 aa7.24□□□□□ -1.25
CASC3-202ENST00000394114 NBPF15Q8N660 670 aa7.24□□□□□ -1.25
CASC3-202ENST00000394114 OTUD7AQ8TE49 926 aaPredicted RBP7.24□□□□□ -1.25
CASC3-202ENST00000394114 PIK3R5Q8WYR1 880 aa7.24□□□□□ -1.25
CASC3-202ENST00000394114 JARID2Q92833 1246 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms